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Author SHA1 Message Date
Jiaming Yuan
1b26a2a561
Copy output data for argsort. (#6866) 
Fix GPU AUC.
 2021-04-16 21:05:01 +08:00
Jiaming Yuan
a5d7094a45
Update documents. (#6856) 
* Add early stopping section to prediction doc.
* Remove best_ntree_limit.
* Better doxygen output.
 2021-04-16 12:41:03 +08:00
ReeceGoding
d31a57cf5f
Removed typo in callbacks.R (#6863) 
Changed "TURE" to "TRUE".
 2021-04-16 05:43:22 +08:00
Jiaming Yuan
bccb7e87d1
Update dmlc-core. (#6862) 
* Install pandoc, pandoc-citeproc on CI.
 2021-04-16 00:14:17 +08:00
ReeceGoding
2e8c101b4a
Removed magrittr dependency in callbacks.R (#6855) 2021-04-15 18:45:17 +08:00
Philip Hyunsu Cho
4224c08cac
Add demo for using AFT survival with Dask (#6853) 2021-04-13 16:18:33 -07:00
Philip Hyunsu Cho
878b990fcd
[CI] Upload Doxygen to correct destination (#6854) 2021-04-13 16:18:13 -07:00
Jiaming Yuan
dee5ef2dfd
Typehint for Sklearn. (#6799) 2021-04-14 06:55:21 +08:00
Jiaming Yuan
3d919db0c0
Fix pip release script. [skip ci] (#6845) 2021-04-14 06:46:02 +08:00
Jiaming Yuan
b9a4f3336a
1.4 release notes. (#6843) 2021-04-13 08:38:27 +08:00
Philip Hyunsu Cho
ea7a6a0321
[CI] Pack R package tarball with pre-built xgboost.so (with GPU support) (#6827) 
* Add scripts for packaging R package with GPU-enabled libxgboost.so

* [CI] Automatically build R package tarball

* Add comments

* Don't build tarball for pull requests

* Update the installation doc
 2021-04-07 21:15:34 -07:00
Jiaming Yuan
f294c4e023
Use constexpr in dh::CopyIf. (#6828) 2021-04-08 07:37:47 +08:00
Viktor Szathmáry
b65e3c4444
[jvm] reduce scala-compiler, scalatest dependency scopes (#6730) 
* [jvm] reduce scala-compiler, scalatest dependency scopes

* [jvm] workaround for GpuTestSuite scalatest dependency

* scalatest scope tweak
 2021-04-07 15:22:08 -07:00
Jiaming Yuan
7bcc8b3e5c
Use batched copy if. (#6826) 2021-04-06 10:34:04 +08:00
giladmaya
aa0d8f20c1
Support configuring constraints by feature names (#6783) 
Co-authored-by: fis <jm.yuan@outlook.com>
 2021-04-04 06:53:33 +08:00
Jiaming Yuan
7e06c81894
Fix approximated predict contribution. (#6811) 2021-04-03 02:15:03 +08:00
Jiaming Yuan
0cced530ea
[doc] Clarify prediction function. (#6813) 2021-04-03 02:12:04 +08:00
Jiaming Yuan
b1fdb220f4
Remove deprecated n_gpus parameter. (#6821) 2021-04-02 03:02:32 +08:00
Jiaming Yuan
74f3a2f4b5
Use CPU input for test_boost_from_prediction. (#6818) 2021-04-02 00:11:35 +08:00
Jiaming Yuan
47b62480af
More general predict proba. (#6817) 
* Use `output_margin` for `softmax`.
* Add test for dask binary cls.

Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2021-04-01 19:52:12 +08:00
Jiaming Yuan
a5c852660b
Update document for sklearn model IO. (#6809) 
* Update the use of JSON.
* Remove unnecessary type cast.
 2021-04-01 15:52:36 +08:00
Jiaming Yuan
905fdd3e08
Fix typos in AUC. (#6795) 2021-03-31 16:35:42 +08:00
Jiaming Yuan
ca998df912
Clarify the behavior of use_rmm. (#6808) 
* Clarify the `use_rmm` flag in document and demo.
 2021-03-31 15:43:11 +08:00
Jiaming Yuan
3039dd194b
Don't estimate sketch batch size when rmm is used. (#6807) 2021-03-31 15:29:56 +08:00
Jiaming Yuan
10ae0f9511
Fix doc for apply method. (#6796) 2021-03-31 15:28:31 +08:00
Jiaming Yuan
138fe8516a
Remove unnecessary calls to iota. (#6797) 2021-03-31 15:27:23 +08:00
Jiaming Yuan
79b8b560d2
Optimize dart inplace predict perf. (#6804) 2021-03-31 15:20:54 +08:00
JohanWork
4aa12e10c0
Update URL (#6810) 2021-03-30 22:27:30 +08:00
James Lamb
f01af43eb0
[dask] disable work stealing explicitly for training tasks (#6794) 2021-03-29 16:47:56 +08:00
Jiaming Yuan
a59c7323b4
Fix inplace predict missing value. (#6787) 2021-03-27 05:36:10 +08:00
Jiaming Yuan
5c87c2bba8
Update demo for prediction. (#6789) 
* Remove use of deprecated ntree_limit.
* Add sklearn demo.
 2021-03-27 03:09:25 +08:00
ShvetsKS
8825670c9c
Memory consumption fix for row-major adapters (#6779) 
Co-authored-by: Kirill Shvets <kirill.shvets@intel.com>
Co-authored-by: fis <jm.yuan@outlook.com>
 2021-03-26 08:44:30 +08:00
Philip Hyunsu Cho
744c46995c
[CI] Upload xgboost4j.dll to S3 (#6781) 2021-03-25 11:34:34 -07:00
Jiaming Yuan
a7083d3c13
Fix dart inplace prediction with GPU input. (#6777) 
* Fix dart inplace predict with data on GPU, which might trigger a fatal check
for device access right.
* Avoid copying data whenever possible.
 2021-03-25 12:00:32 +08:00
Jiaming Yuan
1d90577800
Verify strictly positive labels for gamma regression. (#6778) 
Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2021-03-25 11:46:52 +08:00
Jiaming Yuan
794fd6a46b
Support v3 cuda array interface. (#6776) 2021-03-25 09:58:09 +08:00
Jiaming Yuan
bcc0277338
Re-implement ROC-AUC. (#6747) 
* Re-implement ROC-AUC.

* Binary
* MultiClass
* LTR
* Add documents.

This PR resolves a few issues:
  - Define a value when the dataset is invalid, which can happen if there's an
  empty dataset, or when the dataset contains only positive or negative values.
  - Define ROC-AUC for multi-class classification.
  - Define weighted average value for distributed setting.
  - A correct implementation for learning to rank task.  Previous
  implementation is just binary classification with averaging across groups,
  which doesn't measure ordered learning to rank.
 2021-03-20 16:52:40 +08:00
Jiaming Yuan
4ee8340e79
Support column major array. (#6765) 2021-03-20 05:19:46 +08:00
Jiaming Yuan
f6fe15d11f
Improve parameter validation (#6769) 
* Add quotes to unused parameters.
* Check for whitespace.
 2021-03-20 01:56:55 +08:00
Jiaming Yuan
23b4165a6b
Fix gamma deviance (#6761) 2021-03-20 01:56:17 +08:00
ReeceGoding
c2b6b80600
R documentation: Make construction of DMatrix consistent. 
* Fix inconsistency of construction of DMatrix.
* Fix missing parameters.
 2021-03-20 01:55:13 +08:00
Qingyun Wu
642336add7
[doc] Add FLAML as a fast tuning tool for XGBoost (#6770) 
Co-authored-by: Qingyun Wu <qiw@microsoft.com>
 2021-03-20 01:47:39 +08:00
Philip Hyunsu Cho
4230dcb614
Re-introduce double buffer in UpdatePosition, to fix perf regression in gpu_hist (#6757) 
* Revert "gpu_hist performance tweaks (#5707)"

This reverts commit f779980f7ea7f6f07e86229b8e78144e8a74e6b3.

* Address reviewer's comment

* Fix build error
 2021-03-18 13:56:10 -07:00
Jiaming Yuan
e2d8a99413
Add document for tests directory. [skip ci] (#6760) 2021-03-18 15:15:50 +08:00
ReeceGoding
4e00737c60
Fix R documentation for xgb.train. (#6764) 
The [general documentation](https://xgboost.readthedocs.io/en/latest/parameter.html#parameters-for-tree-booster) clearly has alpha and lambda under its "Parameters for Tree Booster" heading. Furthermore, the R package clearly uses alpha and lambda when told to use the tree booster. This update adds those two parameters to the documentation for the R package.


Closed issue #6763.
 2021-03-18 15:04:00 +08:00
Jiaming Yuan
4f75f514ce
Fix GPU RF (#6755) 
* Fix sampling.
 2021-03-17 06:23:35 +08:00
Jiaming Yuan
1a73a28511
Add device argsort. (#6749) 
This is part of https://github.com/dmlc/xgboost/pull/6747 .
 2021-03-16 16:05:22 +08:00
Jiaming Yuan
325bc93e16
[dask] Use distributed.MultiLock (#6743) 
* [dask] Use `distributed.MultiLock`

This enables training multiple models in parallel.

* Conditionally import `MultiLock`.
* Use async train directly in scikit learn interface.
* Use `worker_client` when available.
 2021-03-16 14:19:41 +08:00
Igor Rukhovich
19a2c54265
Prediction by indices (subsample < 1) (#6683) 
* Another implementation of predicting by indices

* Fixed omp parallel_for variable type

* Removed SparsePageView from Updater
 2021-03-16 15:08:20 +13:00
Philip Hyunsu Cho
366f3cb9d8
Add use_rmm flag to global configuration (#6656) 
* Ensure RMM is 0.18 or later

* Add use_rmm flag to global configuration

* Modify XGBCachingDeviceAllocatorImpl to skip CUB when use_rmm=True

* Update the demo

* [CI] Pin NumPy to 1.19.4, since NumPy 1.19.5 doesn't work with latest Shap
 2021-03-09 14:53:05 -08:00