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925 Commits

Author SHA1 Message Date
WeichenXu
ff71c69adf
[pyspark] Add validation for param 'early_stopping_rounds' and 'validation_indicator_col' (#8250) 
Signed-off-by: Weichen Xu <weichen.xu@databricks.com>
 2022-09-26 17:43:03 +08:00
WeichenXu
ab342af242
[pyspark] Fix xgboost spark estimator dataset repartition issues (#8231) 2022-09-22 21:31:41 +08:00
Jiaming Yuan
b791446623
Initial support for IPv6 (#8225) 
- Merge rabit socket into XGBoost.
- Dask interface support.
- Add test to the socket.
 2022-09-21 18:06:50 +08:00
Bobby Wang
4f42aa5f12
[pyspark] make the model saved by pyspark compatible (#8219) 
Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2022-09-20 16:43:49 +08:00
Bobby Wang
520586ffa7
[pyspark] fix empty data issue when constructing DMatrix (#8245) 
Co-authored-by: Hyunsu Philip Cho <chohyu01@cs.washington.edu>
 2022-09-20 16:43:20 +08:00
Jiaming Yuan
bdf265076d
Make QuantileDMatrix default to sklearn esitmators. (#8220) 2022-09-13 13:52:19 +08:00
Rong Ou
a2686543a9
Common interface for collective communication (#8057) 
* implement broadcast for federated communicator

* implement allreduce

* add communicator factory

* add device adapter

* add device communicator to factory

* add rabit communicator

* add rabit communicator to the factory

* add nccl device communicator

* add synchronize to device communicator

* add back print and getprocessorname

* add python wrapper and c api

* clean up types

* fix non-gpu build

* try to fix ci

* fix std::size_t

* portable string compare ignore case

* c style size_t

* fix lint errors

* cross platform setenv

* fix memory leak

* fix lint errors

* address review feedback

* add python test for rabit communicator

* fix failing gtest

* use json to configure communicators

* fix lint error

* get rid of factories

* fix cpu build

* fix include

* fix python import

* don't export collective.py yet

* skip collective communicator pytest on windows

* add review feedback

* update documentation

* remove mpi communicator type

* fix tests

* shutdown the communicator separately

Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2022-09-12 15:21:12 -07:00
Bobby Wang
7ee10e3dbd
[pyspark] Cleanup the comments (#8217) 2022-09-05 16:20:12 +08:00
Jiaming Yuan
ada4a86d1c
Fix dask interface with latest cupy. (#8210) 2022-09-03 03:10:43 +08:00
Rong Ou
b78bc734d9
Fix dask.py lint error (#8216) 2022-09-02 16:30:01 +08:00
WeichenXu
651f0a8889
[pyspark] Fixing xgboost.spark python doc (#8200) 
Signed-off-by: Weichen Xu <weichen.xu@databricks.com>
 2022-08-25 14:41:48 +08:00
WeichenXu
d03794ce7a
[pyspark] Add param validation for "objective" and "eval_metric" param, and remove invalid booster params (#8173) 
Signed-off-by: Weichen Xu <weichen.xu@databricks.com>
 2022-08-24 15:29:43 +08:00
Jiaming Yuan
9b32e6e2dc
Fix release script. (#8187) (#8195) 2022-08-23 15:08:30 +08:00
WeichenXu
f4628c22a4
[pyspark] Implement SparkXGBRanker estimator (#8172) 
Signed-off-by: Weichen Xu <weichen.xu@databricks.com>
 2022-08-23 02:35:19 +08:00
Rong Ou
ad3bc0edee
Allow insecure gRPC connections for federated learning (#8181) 
* Allow insecure gRPC connections for federated learning

* format
 2022-08-19 12:16:14 +08:00
WeichenXu
53d2a733b0
[pyspark] Make Xgboost estimator support using sparse matrix as optimization (#8145) 
Signed-off-by: Weichen Xu <weichen.xu@databricks.com>
 2022-08-19 01:57:28 +08:00
Gavin Zhang
40a10c217d
Use make on i system (#8178) 
Co-authored-by: GavinZhang <zhanggan@cn.ibm.com>
 2022-08-18 12:55:32 +08:00
Jiaming Yuan
36e7c5364d
[dask] Deterministic rank assignment. (#8018) 2022-08-11 19:17:58 +08:00
Jiaming Yuan
570f8ae4ba
Use black on more Python files. (#8137) 2022-08-11 01:38:11 +08:00
Jiaming Yuan
bdb291f1c2
[doc] Clarification for feature importance. (#8151) 2022-08-11 00:30:42 +08:00
Jiaming Yuan
9ae547f994
Use config_context in sklearn interface. (#8141) 2022-08-09 14:48:54 +08:00
Bobby Wang
03cc3b359c
[pyspark] support a list of feature column names (#8117) 2022-08-08 17:05:27 +08:00
Jiaming Yuan
d87f69215e
Quantile DMatrix for CPU. (#8130) 
- Add a new `QuantileDMatrix` that works for both CPU and GPU.
- Deprecate `DeviceQuantileDMatrix`.
 2022-08-02 15:51:23 +08:00
Jiaming Yuan
2cba1d9fcc
Fix compatibility with latest cupy. (#8129) 
* Fix compatibility with latest cupy.

* Freeze mypy.
 2022-08-01 15:24:42 +08:00
Jiaming Yuan
546de5efd2
[pyspark] Cleanup data processing. (#8088) 
- Use numpy stack for handling list of arrays.
- Reuse concat function from dask.
- Prepare for `QuantileDMatrix`.
- Remove unused code.
- Use iterator for prediction to avoid initializing xgboost model
 2022-07-26 15:00:52 +08:00
Jiaming Yuan
8bdea72688
[Python] Require black and isort for new Python files. (#8096) 
* [Python] Require black and isort for new Python files.

- Require black and isort for spark and dask module.

These files are relatively new and are more conform to the black formatter. We will
convert the rest of the library as we move forward.

Other libraries including dask/distributed and optuna use the same formatting style and
have a more strict standard. The black formatter is indeed quite nice, automating it can
help us unify the code style.

- Gather Python checks into a single script.
 2022-07-20 10:25:24 +08:00
WeichenXu
f23cc92130
[pyspark] User guide doc and tutorials (#8082) 
Co-authored-by: Bobby Wang <wbo4958@gmail.com>
 2022-07-19 22:25:14 +08:00
Bobby Wang
f801d3cf15
[PySpark] change the returning model type to string from binary (#8085) 
* [PySpark] change the returning model type to string from binary

XGBoost pyspark can be can be accelerated by RAPIDS Accelerator seamlessly by
changing the returning model type from binary to string.
 2022-07-19 18:39:20 +08:00
Jiaming Yuan
e28f6f6657
[doc] Integrate pyspark module into sphinx doc [skip ci] (#8066) 2022-07-17 10:46:09 +08:00
Rafail Giavrimis
579ab23b10
Check cudf lazily (#8084) 2022-07-17 09:27:43 +08:00
Bobby Wang
a33f35eecf
[PySpark] add gpu support for spark local mode (#8068) 2022-07-17 07:59:06 +08:00
Bobby Wang
91bb9e2cb3
[PySpark] fix raw_prediction_col parameter and minor cleanup (#8067) 2022-07-16 17:58:57 +08:00
Jiaming Yuan
dae7a41baa
Update Python requirement to >=3.8. (#8071) 
Additional changes:
- Use mamba for CPU test on Jenkins.
- Cleanup CPU test dependencies.
- Restore some of the modin tests
 2022-07-14 18:01:47 +08:00
WeichenXu
176fec8789
PySpark XGBoost integration (#8020) 
Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2022-07-13 13:11:18 +08:00
Jiaming Yuan
a5bc8e2c6a
Fix mypy error with the latest dask. (#8052) 
* Fix mypy error with latest dask.

Dask is adding type hints to its codebase and as the result, checks in XGBoost can be
performed more rigorously.

- Remove compatibility with old dask version where multi lock was missing.
- Restrict input of `X` to be non-series.
- Adopt latest definition of `Delayed`.
- Avoid passing optional `host_ip`.
- Avoid deprecated `worker.nthreads`.
 2022-07-09 08:02:42 +08:00
Jiaming Yuan
701f32b227
[py-sckl] Raise import error if skl is not installed. (#8049) 2022-07-09 05:56:46 +08:00
Jiaming Yuan
ff1c559084
Remove unused variable. (#8046) 2022-07-05 01:59:22 +08:00
Jiaming Yuan
dcaf580476
Fix Python package source install. (#8036) 
* Copy gputreeshap.
 2022-06-29 21:45:09 +08:00
Joris LIMONIER
f470ad3af9
Fix multiple typos (#8028) 
Fix 4 "graphiz" instead of "graphviz".
 2022-06-27 19:21:58 +08:00
Gavin Zhang
6426449c8b
Support IBM i OS (#7920) 2022-06-02 23:38:35 +08:00
Jiaming Yuan
6b55150e80
Fix pylint errors. (#7967) 2022-06-02 18:04:46 +08:00
Gyeongjae Choi
cc6d57aa0d
Add minimal emscripten build support (#7954) 2022-05-30 14:11:40 +08:00
Tim Sabsch
7a039e03fe
Fix incomplete type hints for verbose (#7945) 2022-05-30 12:08:24 +08:00
Jiaming Yuan
d314680a15
Verify shared object version at load. (#7928) 2022-05-23 20:53:30 +08:00
Jiaming Yuan
f93a727869
Address remaining mypy errors in python package. (#7914) 2022-05-18 22:46:15 +08:00
Chengyang
806c92c80b
Add Type Hints for Python Package (#7742) 
Co-authored-by: Chengyang Gu <bridgream@gmail.com>
Co-authored-by: Jiamingy <jm.yuan@outlook.com>
 2022-05-17 22:14:09 +08:00
Rong Ou
77d4a53c32
use RabitContext intead of init/finalize (#7911) 2022-05-17 12:15:41 +08:00
Rong Ou
af907e2d0d
Demo of federated learning using NVFlare (#7879) 
Co-authored-by: jiamingy <jm.yuan@outlook.com>
 2022-05-14 22:45:41 +08:00
Jiaming Yuan
c8f9d4b6e6
Show libxgboost.so path in build info. (#7893) 2022-05-13 18:08:56 +08:00
Jiaming Yuan
db80671d6b
Fix monotone constraint with tuple input. (#7891) 2022-05-13 04:00:03 +08:00