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Author SHA1 Message Date
fis
3e343159ef Release patch release 1.3.2 v1.3.2 2021-01-13 17:35:00 +08:00
Jiaming Yuan
99e802f2ff
Remove duplicated DMatrix. (#6592) (#6599) 2021-01-13 04:44:06 +08:00
Jiaming Yuan
6a29afb480
Fix evaluation result for XGBRanker. (#6594) (#6600) 
* Remove duplicated code, which fixes typo `evals_result` -> `evals_result_`.
 2021-01-13 04:42:43 +08:00
Jiaming Yuan
8e321adac8
Support Solaris. (#6578) (#6588) 
* Add system header.

* Remove use of TR1 on Solaris

Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2021-01-11 02:31:29 +08:00
Jiaming Yuan
d0ec65520a
[backport] Fix best_ntree_limit for dart and gblinear. (#6579) (#6587) 
* [backport] Fix `best_ntree_limit` for dart and gblinear. (#6579)

* Backport num group test fix.
 2021-01-11 01:46:05 +08:00
Jiaming Yuan
7aec915dcd
[Backport] Rename data to X in predict_proba. (#6555) (#6586) 
* [Breaking] Rename `data` to `X` in `predict_proba`. (#6555)

New Scikit-Learn version uses keyword argument, and `X` is the predefined
keyword.

* Use pip to install latest Python graphviz on Windows CI.

* Suppress health check.
 2021-01-10 16:05:17 +08:00
Philip Hyunsu Cho
a78d0d4110
Release patch release 1.3.1 (#6543) v1.3.1 2020-12-21 23:22:32 -08:00
Jiaming Yuan
76c361431f
Remove cupy.array_equal, since it's not compatible with cuPy 7.8 (#6528) (#6535) 
Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2020-12-20 15:11:50 +08:00
Jiaming Yuan
d95d02132a
Fix handling of print period in EvaluationMonitor (#6499) (#6534) 
Co-authored-by: Kirill Shvets <kirill.shvets@intel.com>

Co-authored-by: ShvetsKS <33296480+ShvetsKS@users.noreply.github.com>
Co-authored-by: Kirill Shvets <kirill.shvets@intel.com>
 2020-12-20 15:07:42 +08:00
Jiaming Yuan
7109c6c1f2
[backport] Move metric configuration into booster. (#6504) (#6533) 2020-12-20 10:36:32 +08:00
Jiaming Yuan
bce7ca313c
[backport] Fix save_best. (#6523) 2020-12-18 20:00:29 +08:00
Jiaming Yuan
8be2cd8c91
Enable loading model from <1.0.0 trained with objective='binary:logitraw' (#6517) (#6524) 
* Enable loading model from <1.0.0 trained with objective='binary:logitraw'

* Add binary:logitraw in model compatibility testing suite

* Feedback from @trivialfis: Override ProbToMargin() for LogisticRaw

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>

Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2020-12-18 04:10:09 +08:00
Philip Hyunsu Cho
c5f0cdbc72
Hot fix for libgomp vendoring (#6482) 
* Hot fix for libgomp vendoring

* Set post0 in setup.py
 2020-12-09 10:04:45 -08:00
Jiaming Yuan
1bf3899983 Fix dask ip resolution. (#6475) 
This adopts the solution used in dask/dask-xgboost#40 which employs the get_host_ip from dmlc-core tracker.
v1.3.0 		2020-12-07 16:38:16 -08:00
Jiaming Yuan
c39f6b25f0 Fix filtering callable objects in skl xgb param. (#6466) 
Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2020-12-07 16:38:16 -08:00
Philip Hyunsu Cho
2b3e301543 [CI] Fix CentOS 6 Docker images (#6467) 2020-12-07 16:38:16 -08:00
Hyunsu Cho
10d3419fa6 Release 1.3.0 2020-12-03 21:35:09 -08:00
Philip Hyunsu Cho
b273e5bd4c Vendor libgomp in the manylinux Python wheel (#6461) 
* Vendor libgomp in the manylinux2014_aarch64 wheel

* Use vault repo, since CentOS 6 has reached End-of-Life on Nov 30

* Vendor libgomp in the manylinux2010_x86_64 wheel

* Run verification step inside the container
 2020-12-03 21:29:40 -08:00
Philip Hyunsu Cho
3a83fcb0eb Enforce row-major order in cuPy array (#6459) 2020-12-03 21:29:24 -08:00
hzy001
3efc4ea0d1 Fix broken links. (#6455) 
Co-authored-by: Hao Ziyu <haoziyu@qiyi.com>
Co-authored-by: fis <jm.yuan@outlook.com>
 2020-12-03 21:29:03 -08:00
Jiaming Yuan
a2c778e2d1 Fix period in evaluation monitor. (#6441) 2020-12-03 21:28:45 -08:00
Jiaming Yuan
8a0db293c5 Fix CLI ranking demo. (#6439) 
Save model at final round.
 2020-12-03 21:28:28 -08:00
Honza Sterba
028ec5f028 Optionaly fail when gpu_id is set to invalid value (#6342) 2020-12-03 21:27:58 -08:00
ShvetsKS
38c80bcec4 Thread local memory allocation for BuildHist (#6358) 
* thread mem locality

* fix apply

* cleanup

* fix lint

* fix tests

* simple try

* fix

* fix

* apply comments

* fix comments

* fix

* apply simple comment

Co-authored-by: ShvetsKS <kirill.shvets@intel.com>
 2020-12-03 21:27:31 -08:00
Philip Hyunsu Cho
16ff63905d [CI] Upgrade cuDF and RMM to 0.17 nightlies (#6434) 2020-12-03 21:27:01 -08:00
Philip Hyunsu Cho
a9b09919f9 [R] Fix R package installation via CMake (#6423) 2020-12-03 21:26:29 -08:00
Hyunsu Cho
f3b060401a Release 1.3.0 RC1 v1.3.0rc1 2020-11-21 11:36:08 -08:00
Jiaming Yuan
42d31d9dcb
Fix MPI build. (#6403) 2020-11-21 13:38:21 +08:00
Jiaming Yuan
2ce2a1a4d8
[SKL] Propagate parameters to booster during set_param. (#6416) 2020-11-20 20:37:35 +08:00
zhang_jf
cc581b3b6b
Misleading exception information: no such param of "allow_non_zero_missing" (#6418) 2020-11-20 19:33:34 +08:00
Jiaming Yuan
00218d065a
[dask] Update document. [skip ci] (#6413) 2020-11-20 19:16:19 +08:00
Jiaming Yuan
c120822a24
Fix flaky sparse page dmatrix test. (#6417) 2020-11-20 19:15:45 +08:00
Jiaming Yuan
a7b42adb74
Fix dask predict (#6412) 2020-11-20 10:10:52 +08:00
Jiaming Yuan
44a9d69efb
Small cleanup to evaluator. (#6400) 2020-11-20 09:33:51 +08:00
Philip Hyunsu Cho
9c9070aea2
Use pytest conventions consistently (#6337) 
* Do not derive from unittest.TestCase (not needed for pytest)

* assertRaises -> pytest.raises

* Simplify test_empty_dmatrix with test parametrization

* setUpClass -> setup_class, tearDownClass -> teardown_class

* Don't import unittest; import pytest

* Use plain assert

* Use parametrized tests in more places

* Fix test_gpu_with_sklearn.py

* Put back run_empty_dmatrix_reg / run_empty_dmatrix_cls

* Fix test_eta_decay_gpu_hist

* Add parametrized tests for monotone constraints

* Fix test names

* Remove test parametrization

* Revise test_slice to be not flaky
 2020-11-19 17:00:15 -08:00
Philip Hyunsu Cho
c763b50dd0
[CI] Upgrade to MacOS Mojave image (#6406) 2020-11-18 20:29:10 -08:00
Nan Zhu
4d1d5d4010
[jvm-packages] fix potential unit test suites aborted issue (#6373) 
* fix race conditio

* code cleaning

rm pom.xml-e

* clean again

* fix compilation issue

* recover

* avoid using getOrCreate

* interrupt zombie threads

* safe guard

* fix deadlock

* Update SparkParallelismTracker.scala
 2020-11-17 10:59:26 -08:00
Philip Hyunsu Cho
e426b6e040
[R] Do not convert continuous labels to factors (#6380) 
* [R] Do not convert continuous labels to factors

* Address reviewer's comment
 2020-11-17 09:19:16 -08:00
James Lamb
3cca1c5fa1
[R] remove uses of exists() (#6387) 2020-11-17 15:06:23 +08:00
Jiaming Yuan
3ac173fc8b
Fix typo. (#6399) 2020-11-16 16:59:12 -08:00
Nikhil Choudhary
ae1662028a
Fixed few grammatical mistakes in doc (#6393) 2020-11-15 13:48:08 +08:00
Philip Hyunsu Cho
5cb24d0d39
Fix broken link in CLI doc (#6396) 2020-11-14 17:58:07 -08:00
ShvetsKS
512b464cfa
Disable HT for DMatrix creation (#6386) 
Co-authored-by: SHVETS, KIRILL <kirill.shvets@intel.com>
 2020-11-14 22:18:33 +08:00
Jiaming Yuan
fcd6fad822
[dask] Small cleanup. (#6391) 2020-11-14 22:15:05 +08:00
Jiaming Yuan
4ccf92ea34
[dask] Fix union of workers. (#6375) 2020-11-13 16:55:05 +08:00
Jiaming Yuan
fcfeb4959c
Deprecate positional arguments. (#6365) 
Deprecate positional arguments in following functions:

- `__init__` for all classes in sklearn module.
- `fit` method for all classes in sklearn module.
- dask interface.
- `set_info` for `DMatrix` class.

Refactor the evaluation matrices handling.
 2020-11-13 11:10:30 +08:00
Philip Hyunsu Cho
e5193c21a1
[dask] Allow empty data matrix in AFT survival (#6379) 
* [dask] Allow empty data matrix in AFT survival

* Add unit test
 2020-11-12 17:49:58 -08:00
Philip Hyunsu Cho
5a33c2f3a0
[CI] Add noLD R test (#6382) 
* [CI] Add noLD test

* Make noLD test only trigger with a PR comment

* [CI] Don't install stringi

* Add the Titanic example as a unit test

* Document trigger

* add to index

* Clarify that it needs to be a review comment
 2020-11-12 12:41:25 -08:00
Jiaming Yuan
c1a62b5fa2
Expect gpu external memory to fail. (#6381) 2020-11-12 19:24:48 +08:00
Jiaming Yuan
c90f968d92
Update Python documents. (#6376) 2020-11-12 17:51:32 +08:00