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226 Commits

Author SHA1 Message Date
Jiaming Yuan
f4798718c7
Use hist as the default tree method. (#9320) 2023-06-27 23:04:24 +08:00
Jiaming Yuan
cfa9c42eb4
Fix callback in AFT viz demo. (#9333) 
* Fix callback in AFT viz demo.

- Update the callback function.
- Add lint check.
 2023-06-26 22:35:02 +08:00
Jiaming Yuan
1fcc26a6f8
Set ndcg to default for LTR. (#8822) 
- Add document.
- Add tests.
- Use `ndcg` with `topk` as default.
 2023-06-09 23:31:33 +08:00
Boris
7f9cb921f4
Rearranged maven profiles so that scala-2.13 artifacts are published without gpu-related libraries (#9253) 2023-06-05 13:52:10 -07:00
Jiaming Yuan
9fbde21e9d
Rework the precision metric. (#9222) 
- Rework the precision metric for both CPU and GPU.
- Mention it in the document.
- Cleanup old support code for GPU ranking metric.
- Deterministic GPU implementation.

* Drop support for classification.

* type.

* use batch shape.

* lint.

* cpu build.

* cpu build.

* lint.

* Tests.

* Fix.

* Cleanup error message.
 2023-06-02 20:49:43 +08:00
Philip Hyunsu Cho
db8288121d
Revert "Publishing scala-2.13 artifacts to the maven S3 repo. (#9224)" (#9233) 
This reverts commit bb2a17b90c4f212191932dce3453591bd7f47cfc.
 2023-06-01 14:39:39 -07:00
Boris
bb2a17b90c
Publishing scala-2.13 artifacts to the maven S3 repo. (#9224) 2023-06-01 10:45:18 -07:00
Jiaming Yuan
62e9387cd5
[ci] Update PySpark version. (#9214) 2023-05-31 03:00:44 +08:00
Boris
a01df102c9
Scala 2.13 support. (#9099) 
1. Updated the test logic
2. Added smoke tests for Spark examples.
3. Added integration tests for Spark with Scala 2.13
 2023-05-27 19:34:02 +08:00
Jiaming Yuan
8c174ef2d3
[CI] Update images that are not related to binary release. (#9205) 
* [CI] Update images that are not related to the binary release.

- Update clang-tidy, prefer tools from the Ubuntu repository.
- Update GPU image to 22.04.
- Small cleanup to the tidy script.
- Remove gpu_jvm, which seems to be unused.
 2023-05-27 17:40:46 +08:00
Uriya Harpeness
a075aa24ba
Move python tool configurations to pyproject.toml, and add the python 3.11 classifier. (#9112) 2023-05-06 02:59:06 +08:00
Philip Hyunsu Cho
a5cd2412de
Replace setup.py with pyproject.toml (#9021) 
* Create pyproject.toml
* Implement a custom build backend (see below) in packager directory. Build logic from setup.py has been refactored and migrated into the new backend.
* Tested: pip wheel . (build wheel), python -m build --sdist . (source distribution)
 2023-04-20 13:51:39 -07:00
Jiaming Yuan
bac22734fb
Remove ntree limit in python package. (#8345) 
- Remove `ntree_limit`. The parameter has been deprecated since 1.4.0.
- The SHAP package compatibility is broken.
 2023-03-31 19:01:55 +08:00
Philip Hyunsu Cho
6676c28cbc
[CI] Fix Windows wheel to be compatible with Poetry (#8991) 
* [CI] Fix Windows wheel to be compatible with Poetry

* Typo

* Eagerly scan globs to avoid patching same file twice
 2023-03-28 21:32:54 -07:00
Jiaming Yuan
401ce5cf5e
Run linters with the multi output demo. (#8966) 2023-03-28 00:47:28 +08:00
Jiaming Yuan
151882dd26
Initial support for multi-target tree. (#8616) 
* Implement multi-target for hist.

- Add new hist tree builder.
- Move data fetchers for tests.
- Dispatch function calls in gbm base on the tree type.
 2023-03-22 23:49:56 +08:00
Jiaming Yuan
f7ce0ec0df
Upgrade gcc toolchain to 9.x. (#8878) 
* Use new tool chain.

* Use gcc-9.

* Use cmake from system.

* DOn't link leak.
 2023-03-07 08:25:23 -08:00
Jiaming Yuan
6a892ce281
Specify src path for isort. (#8867) 2023-03-06 17:30:27 +08:00
Jiaming Yuan
4d665b3fb0
Restore clang tidy test. (#8861) 2023-03-03 13:47:04 -08:00
Philip Hyunsu Cho
6d8afb2218
[CI] Require C++17 + CMake 3.18; Use CUDA 11.8 in CI (#8853) 
* Update to C++17

* Turn off unity build

* Update CMake to 3.18

* Use MSVC 2022 + CUDA 11.8

* Re-create stack for worker images

* Allocate more disk space for Windows

* Tempiorarily disable clang-tidy

* RAPIDS now requires Python 3.10+

* Unpin cuda-python

* Use latest NCCL

* Use Ubuntu 20.04 in RMM image

* Mark failing mgpu test as xfail
 2023-03-01 09:22:24 -08:00
Jiaming Yuan
cce4af4acf
Initial support for quantile loss. (#8750) 
- Add support for Python.
- Add objective.
 2023-02-16 02:30:18 +08:00
Jiaming Yuan
7b3d473593
[doc] Add demo for inference using individual tree. (#8752) 2023-02-07 04:40:18 +08:00
Jiaming Yuan
0f37a01dd9
Require black formatter for the python package. (#8748) 2023-02-07 01:53:33 +08:00
Philip Hyunsu Cho
dd79ab846f
[CI] Fix failing arm build (#8751) 
* Always install Conda env into /opt/python; use Mamba

* Change ownership of Conda env to buildkite-agent user

* Use unique name

* Fix
 2023-02-03 22:32:48 -08:00
James Lamb
0d8248ddcd
[R] discourage use of regex for fixed string comparisons (#8736) 2023-01-30 18:47:21 +08:00
Jiaming Yuan
9fb12b20a4
Cleanup the callback module. (#8702) 
- Cleanup pylint markers.
- run formatter.
- Update examples of using callback.
 2023-01-22 00:13:49 +08:00
Jiaming Yuan
e27cda7626
[CI] Skip pyspark sparse tests. (#8675) 2023-01-14 05:37:00 +08:00
Jiaming Yuan
badeff1d74
Init estimation for regression. (#8272) 2023-01-11 02:04:56 +08:00
James Lamb
9a98c3726c
[R] [CI] add more linting checks (#8624) 2022-12-29 18:20:36 +08:00
James Lamb
c7e82b5914
[R] enforce lintr checks (fixes #8012) (#8613) 2022-12-25 05:02:56 +08:00
James Lamb
7a07dcf651
[R] resolve line_length_linter warnings (#8565) 
Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2022-12-14 21:04:24 +08:00
Philip Hyunsu Cho
35d8447282
[CI] Use conda-forge channel in conda (#8583) 2022-12-11 23:25:29 -08:00
Jiaming Yuan
8824b40961
Update date in release script. [skip ci] (#8574) 2022-12-09 23:16:10 +08:00
James Lamb
ffee35e0f0
[R] [ci] remove dependency on {devtools} (#8563) 2022-12-09 01:21:28 +08:00
James Lamb
05fc6f3ca9
[R] [ci] move linting code out of package (#8545) 2022-12-07 03:18:17 +08:00
Jiaming Yuan
d99bdd1b1e
[CI] Fix github action mismatched glibcxx. (#8551) 
* [CI] Fix github action mismatched glibcxx.

Split up the Linux test to use the toolchain from conda forge.
 2022-12-06 17:42:15 +08:00
Jiaming Yuan
e07245f110
Take datatable as row major input. (#8472) 
* Take datatable as row major input.

Try to avoid a transform with dense table.
 2022-11-24 09:20:13 +08:00
Jiaming Yuan
284dcf8d22
Add script for change version. (#8443) 
- Replace jvm regex replacement script with mvn command.
- Replace cmake script for python version with python script.
- Automate rest of the manual steps.

The script can handle dev branch, rc release, and formal release version.
 2022-11-24 00:06:39 +08:00
Jiaming Yuan
5f1a6fca0d
[R] Use new interface for creating DMatrix from CSR. (#8455) 
* [R] Use new interface for creating DMatrix from CSR.

- CSC is still using the old API.

The old API is not aware of `nthread` parameter, which makes DMatrix to use all available
thread during construction and during transformation lie `SparsePage` -> `CSCPage`.
 2022-11-23 21:36:43 +08:00
Jiaming Yuan
0252d504d8
Fix R package build on CI. (#8445) 
Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2022-11-09 12:18:36 +08:00
Jiaming Yuan
a83748eb45
[CI] Revise R tests. (#8430) 
- Use the standard package check (check on the tarball instead of the source tree).
- Run commands in parallel.
- Cleanup dependencies installation.
- Replace makefile.
- Documentation.
- Test using the image from rhub.
 2022-11-09 09:12:13 +08:00
Jiaming Yuan
0d3da9869c
Require isort on all Python files. (#8420) 2022-11-08 12:59:06 +08:00
Jiaming Yuan
2ed3c29c8a
[CI] Cleanup github action tests. (#8397) 
- Merge doxygen build with sphinx.
- Use mamba on non-windows Github Action.
 2022-10-29 06:04:27 +08:00
Jiaming Yuan
a408c34558
Update JSON parser demo with categorical feature. (#8401) 
- Parse categorical features in the Python example.
- Add tests.
- Update document.
 2022-10-28 20:57:43 +08:00
Jiaming Yuan
cfd2a9f872
Extract dask and spark test into distributed test. (#8395) 
- Move test files.
- Run spark and dask separately to prevent conflicts.
- Gather common code into the testing module.
 2022-10-28 16:24:32 +08:00
Jiaming Yuan
a2593e60bf
Speedup R test on github. (#8388) 2022-10-26 18:02:27 +08:00
Jiaming Yuan
cf70864fa3
Move Python testing utilities into xgboost module. (#8379) 
- Add typehints.
- Fixes for pylint.

Co-authored-by: Hyunsu Philip Cho <chohyu01@cs.washington.edu>
 2022-10-26 16:56:11 +08:00
Rong Ou
8f3dee58be
Speed up tests with federated learning enabled (#8350) 
* Speed up tests with federated learning enabled

* Re-enable timeouts

Co-authored-by: Hyunsu Philip Cho <chohyu01@cs.washington.edu>
 2022-10-17 15:17:04 -07:00
Philip Hyunsu Cho
29595102b9
[CI] Set up test analytics for CPU Python tests (#8333) 
* [CI] Set up test analytics for CPU Python tests

* Install test collector
 2022-10-12 23:15:50 -07:00
Philip Hyunsu Cho
2faa744aba
[CI] Test federated learning plugin in the CI (#8325) 2022-10-12 13:57:39 -07:00