523 Commits

Author SHA1 Message Date
Tianqi Chen
d581a3d0e7 [UPDATE] Update rabit and threadlocal (#2114)
* [UPDATE] Update rabit and threadlocal

* minor fix to make build system happy

* upgrade requirement to g++4.8

* upgrade dmlc-core

* update travis
2017-03-16 18:48:37 -07:00
Philip Cho
aeb4e76118 Histogram Optimized Tree Grower (#1940)
* Support histogram-based algorithm + multiple tree growing strategy

* Add a brand new updater to support histogram-based algorithm, which buckets
  continuous features into discrete bins to speed up training. To use it, set
  `tree_method = fast_hist` to configuration.
* Support multiple tree growing strategies. For now, two policies are supported:
  * `grow_policy=depthwise` (default):  favor splitting at nodes closest to the
    root, i.e. grow depth-wise.
  * `grow_policy=lossguide`: favor splitting at nodes with highest loss change
* Improve single-threaded performance
  * Unroll critical loops
  * Introduce specialized code for dense data (i.e. no missing values)
* Additional training parameters: `max_leaves`, `max_bin`, `grow_policy`, `verbose`

* Adding a small test for hist method

* Fix memory error in row_set.h

When std::vector is resized, a reference to one of its element may become
stale. Any such reference must be updated as well.

* Resolve cross-platform compilation issues

* Versions of g++ older than 4.8 lacks support for a few C++11 features, e.g.
  alignas(*) and new initializer syntax. To support g++ 4.6, use pre-C++11
  initializer and remove alignas(*).
* Versions of MSVC older than 2015 does not support alignas(*). To support
  MSVC 2012, remove alignas(*).
* For g++ 4.8 and newer, alignas(*) is enabled for performance benefits.
* Some old compilers (MSVC 2012, g++ 4.6) do not support template aliases
  (which uses `using` to declate type aliases). So always use `typedef`.

* Fix a host of CI issues

* Remove dependency for libz on osx
* Fix heading for hist_util
* Fix minor style issues
* Add missing #include
* Remove extraneous logging

* Enable tree_method=hist in R

* Renaming HistMaker to GHistBuilder to avoid confusion

* Fix R integration

* Respond to style comments

* Consistent tie-breaking for priority queue using timestamps

* Last-minute style fixes

* Fix issuecomment-271977647

The way we quantize data is broken. The agaricus data consists of all
categorical values. When NAs are converted into 0's,
`HistCutMatrix::Init` assign both 0's and 1's to the same single bin.

Why? gmat only the smallest value (0) and an upper bound (2), which is twice
the maximum value (1). Add the maximum value itself to gmat to fix the issue.

* Fix issuecomment-272266358

* Remove padding from cut values for the continuous case
* For categorical/ordinal values, use midpoints as bin boundaries to be safe

* Fix CI issue -- do not use xrange(*)

* Fix corner case in quantile sketch

Signed-off-by: Philip Cho <chohyu01@cs.washington.edu>

* Adding a test for an edge case in quantile sketcher

max_bin=2 used to cause an exception.

* Fix fast_hist test

The test used to require a strictly increasing Test AUC for all examples.
One of them exhibits a small blip in Test AUC before achieving a Test AUC
of 1. (See bottom.)

Solution: do not require monotonic increase for this particular example.

[0] train-auc:0.99989 test-auc:0.999497
[1] train-auc:1 test-auc:0.999749
[2] train-auc:1 test-auc:0.999749
[3] train-auc:1 test-auc:0.999749
[4] train-auc:1 test-auc:0.999749
[5] train-auc:1 test-auc:0.999497
[6] train-auc:1 test-auc:1
[7] train-auc:1 test-auc:1
[8] train-auc:1 test-auc:1
[9] train-auc:1 test-auc:1
2017-01-13 09:25:55 -08:00
Qiang Kou (KK)
7948d1c799 disable openmp on solaris (#1912) 2016-12-28 11:32:56 -08:00
tqchen
96b17971ac Fix continue training in CLI 2016-03-10 12:43:25 -08:00
tqchen
0df2ed80c8 [JVM] Make JVM Serializable 2016-03-03 21:04:02 -08:00
tqchen
e80d3db64b [DIST] Enable multiple thread and tracker, make rabit and xgboost more thread-safe by using thread local variables. 2016-03-03 20:36:14 -08:00
tqchen
4a16b729fc [PYTHON] Simplify training logic, update rabit lib 2016-02-28 13:20:55 -08:00
tqchen
2230f1273f [DISK] Add shard option to disk 2016-02-10 11:17:17 -08:00
tqchen
1495a43cea [R] make all customizations to meet strict standard of cran 2016-01-16 10:25:12 -08:00
tqchen
634db18a0f [TRAVIS] cleanup travis script 2016-01-16 10:25:12 -08:00
tqchen
31d8e93ef3 [FIX] fix plugin system 2016-01-16 10:25:11 -08:00
tqchen
2dc6c2dc52 [R] enable R compile
[R] Enable R build for windows and linux
2016-01-16 10:24:02 -08:00
tqchen
d75e3ed05d [LIBXGBOOST] pass demo running. 2016-01-16 10:24:01 -08:00
tqchen
0d95e863c9 [LEARNER] refactor learner 2016-01-16 10:24:01 -08:00
tqchen
e4567bbc47 [REFACTOR] Add alias, allow missing variables, init gbm interface 2016-01-16 10:24:01 -08:00
tqchen
d4677b6561 [TREE] finish move of updater 2016-01-16 10:24:01 -08:00
tqchen
4adc4cf0b9 [TREE] Move the files to target refactor location 2016-01-16 10:24:01 -08:00
tqchen
20043f63a6 [TREE] Move colmaker 2016-01-16 10:24:01 -08:00
tqchen
c8ccb61b9e [TREE] Enable updater registry 2016-01-16 10:24:01 -08:00
tqchen
844e8a153d [TREE] Refactor to new logging 2016-01-16 10:24:01 -08:00
tqchen
05115adbff [TREE] move tree model 2016-01-16 10:24:01 -08:00
tqchen
b4d0bb5a6d [METRIC] all metric move finished 2016-01-16 10:24:01 -08:00
tqchen
dedd87662b [OBJ] Add basic objective function and registry 2016-01-16 10:24:01 -08:00