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Author SHA1 Message Date
Jiaming Yuan
dfac5f89e9
Group CLI demo into subdirectory. (#6258) 
CLI is not most developed interface. Putting them into correct directory can help new users to avoid it as most of the use cases are from a language binding.
 2020-10-28 14:40:44 -07:00
James Lamb
6383757dca
[R] allow xgb.plot.importance() calls to fill a grid (#6294) 2020-10-28 14:37:28 -07:00
Tanuja Kirthi Doddapaneni
d261ba029a
Added USE_NCCL_LIB_PATH option to enable user to set NCCL_LIBRARY during build (#6310) 
Description: To enable user to set NCCL_LIBRARY during build
 2020-10-28 14:36:31 -07:00
vcarpani
671971e12e
Compiler warnings (#6286) 
* Fix warnings for json.h

* Fix warnings for metric.h

* Fix warnings for updater_quantile_hist.cc.

* Fix warnings for updater_histmaker.cc.

Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2020-10-28 13:46:15 -07:00
Jiaming Yuan
e8884c4637
Document tree method for feature weights. (#6312) 2020-10-28 13:42:13 -07:00
Philip Hyunsu Cho
143b278267
Mark flaky tests as XFAIL (#6299) 
* Temporarily skip TestGPUUpdaters::test_categorical

* Temporarily skip test_boost_from_prediction[approx]
 2020-10-28 11:50:57 -07:00
Jiaming Yuan
c4da967b5c
Support unity build. (#6295) 
* Support unity build.

* Setup on Windows Jenkins.

* Revert "Setup on Windows Jenkins."

This reverts commit 8345cb8d2b009eec8ae9fa6f16412a7c9b6ec12c.
 2020-10-28 11:49:28 -07:00
Philip Hyunsu Cho
f6169c0b16
[CI] Use separate Docker cache for each CUDA version (#6305) 2020-10-28 11:07:00 -07:00
Jiaming Yuan
3310e208fd
Fix inplace prediction interval. (#6259) 
* Add back the interval in call.
* Make the interval non-optional.
 2020-10-28 13:13:59 +08:00
Jiaming Yuan
cc76724762
Reduce warning. (#6273) 2020-10-27 12:24:19 -07:00
DIVYA CHAUHAN
4e9c4f2d73
Create a tutorial for using the C API in a C/C++ application (#6285) 
Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2020-10-27 12:19:20 -07:00
James Lamb
e1de390e6e
[ci] replace 'egrep' with 'grep -E' (#6287) 2020-10-27 12:05:48 -07:00
Rory Mitchell
f0c3ff313f
Update GPUTreeShap, add docs (#6281) 
* Update GPUTreeShap, add docs

* Fix test

Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2020-10-27 18:22:12 +13:00
Jiaming Yuan
b180223d18
Cleanup RABIT. (#6290) 
* Remove recovery and MPI speed tests.
* Remove readme.
* Remove Python binding.
* Add checks in C API.
 2020-10-27 08:48:22 +08:00
Akira Funahashi
8e0f5a6fc7
Update plugin instructions for CMake build (#6289) 2020-10-26 17:42:07 -07:00
Philip Hyunsu Cho
c8ec62103a
Deprecate LabelEncoder in XGBClassifier; Enable cuDF/cuPy inputs in XGBClassifier (#6269) 
* Deprecate LabelEncoder in XGBClassifier; skip LabelEncoder for cuDF/cuPy inputs

* Add unit tests for cuDF and cuPy inputs with XGBClassifier

* Fix lint

* Clarify warning

* Move use_label_encoder option to XGBClassifier constructor

* Add a test for cudf.Series

* Add use_label_encoder to XGBRFClassifier doc

* Address reviewer feedback
 2020-10-26 13:20:51 -07:00
Jiaming Yuan
bcfab4d726
Revert "Disable JSON full serialization for now. (#6248)" (#6266) 
This reverts commit 6d293020fbfa2c67b532d550fe5d55689662caac.
 2020-10-27 03:30:47 +08:00
Jiaming Yuan
d61b628bf5
Remove RABIT CMake targets. (#6275) 
* Now it's built as part of libxgboost.
* Set correct C API error in RABIT initialization and finalization.
* Remove redundant message.
* Guard the tracker print C API.
 2020-10-27 01:30:20 +08:00
Jiaming Yuan
2686d32a36
Skip dask tests on ARM. (#6267) 
Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2020-10-26 15:09:05 +08:00
Philip Hyunsu Cho
677f676172
Use UserWarning for old callback, as DeprecationWarning is not visible (#6270) 2020-10-22 01:10:52 -07:00
Philip Hyunsu Cho
1300467d36
Fix a typo in is_arm() in testing.py [skip ci] (#6271) 2020-10-22 13:07:14 +08:00
Jiaming Yuan
b5c2a47b20
Drop single point model recovery (#6262) 
* Pass rabit params in JVM package.
* Implement timeout using poll timeout parameter.
* Remove OOB data check.
 2020-10-21 15:27:03 +08:00
Jiaming Yuan
81c37c28d5
Time the CPU tests on Jenkins. (#6257) 
* Time the CPU tests on Jenkins.
* Reduce thread contention.
* Add doc.
* Skip heavy tests on ARM.
 2020-10-20 17:19:07 -07:00
Igor Moura
d1254808d5
Clean up C++ warnings (#6213) 2020-10-19 23:02:33 +08:00
Jiaming Yuan
ddf37cca30
Unify thread configuration. (#6186) 2020-10-19 16:05:42 +08:00
Philip Hyunsu Cho
7f6ed5780c
[CI] Build a Python wheel for aarch64 platform (#6253) 2020-10-18 22:35:19 -07:00
Jiaming Yuan
5037abeb86
Fix linear gpu input (#6255) 2020-10-19 12:02:36 +08:00
Yuan Tang
cdcdab98b8
Add sponsors link to FUNDING.yml (#6252) 2020-10-18 19:17:11 -07:00
Philip Hyunsu Cho
65ea42bd42
[CI] Reduce testing load with RMM (#6249) 
* [CI] Reduce testing load with RMM

* Address reviewer's comment
 2020-10-18 19:16:46 -07:00
Manikya Bardhan
549f361b71
Updated winning solutions list (#6254) 2020-10-19 04:06:48 +08:00
Jiaming Yuan
6d293020fb
Disable JSON full serialization for now. (#6248) 
* Disable JSON serialization for now.

* Multi-class classification is checkpointing for each iteration.
This brings significant overhead.

Revert: 90355b4f007ae

* Set R tests to use binary.
 2020-10-16 17:59:54 +08:00
Jiaming Yuan
52452bebb9
Fix cls typo. (#6247) 2020-10-16 16:40:44 +08:00
Yuan Tang
3098d7cee0
Add link to XGBoost's Twitter handle (#6244) 2020-10-15 16:54:34 -07:00
Jiaming Yuan
3da5a69dc9
Fix typo in dask interface. (#6240) 2020-10-15 15:26:29 +08:00
dependabot[bot]
06e453ddf4
Bump junit from 4.11 to 4.13.1 in /jvm-packages/xgboost4j (#6230) 
Bumps [junit](https://github.com/junit-team/junit4) from 4.11 to 4.13.1.
- [Release notes](https://github.com/junit-team/junit4/releases)
- [Changelog](https://github.com/junit-team/junit4/blob/main/doc/ReleaseNotes4.11.md)
- [Commits](https://github.com/junit-team/junit4/compare/r4.11...r4.13.1)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2020-10-13 19:46:19 -07:00
dependabot[bot]
b51a717deb
Bump junit from 4.11 to 4.13.1 in /jvm-packages/xgboost4j-gpu (#6233) 
Bumps [junit](https://github.com/junit-team/junit4) from 4.11 to 4.13.1.
- [Release notes](https://github.com/junit-team/junit4/releases)
- [Changelog](https://github.com/junit-team/junit4/blob/main/doc/ReleaseNotes4.11.md)
- [Commits](https://github.com/junit-team/junit4/compare/r4.11...r4.13.1)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2020-10-13 19:44:56 -07:00
Jiaming Yuan
bed7ae4083
Loop over thrust::reduce. (#6229) 
* Check input chunk size of dqdm.
* Add doc for current limitation.
 2020-10-14 10:40:56 +13:00
Rory Mitchell
734a911a26
Loop over copy_if (#6201) 
* Loop over copy_if

* Catch OOM.

Co-authored-by: fis <jm.yuan@outlook.com>
 2020-10-14 10:23:16 +13:00
Wittty-Panda
0fc263ead5
Update the list of winning solutions (#6222) 2020-10-13 20:05:12 +08:00
Jiaming Yuan
b05073bda5
[dask] Test for data initializaton. (#6226) 2020-10-13 11:08:35 +08:00
Jiaming Yuan
2443275891
Cleanup Python code. (#6223) 
* Remove pathlike as XGBoost 1.2 requires Python 3.6.
* Move conditional import of dask/distributed into dask module.
 2020-10-12 15:44:41 +08:00
Jiaming Yuan
70c2039748
Catch all standard exceptions in C API. (#6220) 
* `std::bad_alloc` is not guaranteed to be caught.
 2020-10-12 14:01:46 +08:00
Jiaming Yuan
2241563f23
Handle duplicated values in sketching. (#6178) 
* Accumulate weights in duplicated values.
* Fix device id in iterative dmatrix.
 2020-10-10 19:32:44 +08:00
Jiaming Yuan
ab5b35134f
Rework Python callback functions. (#6199) 
* Define a new callback interface for Python.
* Deprecate the old callbacks.
* Enable early stopping on dask.
 2020-10-10 17:52:36 +08:00
Jiaming Yuan
b5b24354b8
More categorical tests and disable shap sparse test. (#6219) 
* Fix tree load with 32 category.
 2020-10-10 16:12:37 +08:00
Philip Hyunsu Cho
c991eb612d
[jvm-packages] Fix up build for xgboost4j-gpu, xgboost4j-spark-gpu (#6216) 
* [CI] Clean up build for JVM packages

* Use correct path for saving native lib

* Fix groupId of maven-surefire-plugin

* Fix stashing of xgboost4j_jar_gpu

* [CI] Don't run xgboost4j-tester with GPU, since it doesn't use gpu_hist
 2020-10-09 14:08:15 -07:00
Jiaming Yuan
70ce5216b5
Add high level tests for categorical data. (#6179) 
* Fix unique.
 2020-10-09 09:27:23 +08:00
vcarpani
6bc9747df5
Reduce compile warnings (#6198) 
Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2020-10-08 23:14:59 +08:00
ShvetsKS
a4ce0eae43
CPU predict performance improvement (#6127) 
Co-authored-by: ShvetsKS <kirill.shvets@intel.com>
 2020-10-08 15:50:21 +03:00
Jiaming Yuan
4cfdcaaf7b
Move non-OpenMP gtest to GitHub Actions (#6210) 2020-10-08 00:58:21 -07:00