Normal prediction with DMatrix is now thread safe with locks. Added inplace prediction is lock free thread safe.
When data is on device (cupy, cudf), the returned data is also on device.
* Implementation for numpy, csr, cudf and cupy.
* Implementation for dask.
* Remove sync in simple dmatrix.
* Move thread local entry into Learner.
This is an attempt to workaround CUDA context issue in static variable, where
the CUDA context can be released before device vector.
* Add PredictionEntry to thread local entry.
This eliminates one copy of prediction vector.
* Don't define CUDA C API in a namespace.
* Use pre-rounding based method to obtain reproducible floating point
summation.
* GPU Hist for regression and classification are bit-by-bit reproducible.
* Add doc.
* Switch to thrust reduce for `node_sum_gradient`.
* Fix syncing DMatrix columns.
* notes for tree method.
* Enable feature validation for all interfaces except for jvm.
* Better tests for boosting from predictions.
* Disable validation on JVM.
* Disable parameter validation for now.
Scikit-Learn passes all parameters down to XGBoost, whether they are used or
not.
* Add option `validate_parameters`.
* - implementation of map ranking algorithm
- also effected necessary suggestions mentioned in the earlier ranking pr's
- made some performance improvements to the ndcg algo as well
* Remove `learning_rates`.
It's been deprecated since we have callback.
* Set `before_iteration` of `reset_learning_rate` to False to preserve
the initial learning rate, and comply to the term "reset".
Closes#4709.
* Tests for various `tree_method`.
* Extract interaction constraints from split evaluator.
The reason for doing so is mostly for model IO, where num_feature and interaction_constraints are copied in split evaluator. Also interaction constraint by itself is a feature selector, acting like column sampler and it's inefficient to bury it deep in the evaluator chain. Lastly removing one another copied parameter is a win.
* Enable inc for approx tree method.
As now the implementation is spited up from evaluator class, it's also enabled for approx method.
* Removing obsoleted code in colmaker.
They are never documented nor actually used in real world. Also there isn't a single test for those code blocks.
* Unifying the types used for row and column.
As the size of input dataset is marching to billion, incorrect use of int is subject to overflow, also singed integer overflow is undefined behaviour. This PR starts the procedure for unifying used index type to unsigned integers. There's optimization that can utilize this undefined behaviour, but after some testings I don't see the optimization is beneficial to XGBoost.
This makes GPU Hist robust in distributed environment as some workers might not
be associated with any data in either training or evaluation.
* Disable rabit mock test for now: See #5012 .
* Disable dask-cudf test at prediction for now: See #5003
* Launch dask job for all workers despite they might not have any data.
* Check 0 rows in elementwise evaluation metrics.
Using AUC and AUC-PR still throws an error. See #4663 for a robust fix.
* Add tests for edge cases.
* Add `LaunchKernel` wrapper handling zero sized grid.
* Move some parts of allreducer into a cu file.
* Don't validate feature names when the booster is empty.
* Sync number of columns in DMatrix.
As num_feature is required to be the same across all workers in data split
mode.
* Filtering in dask interface now by default syncs all booster that's not
empty, instead of using rank 0.
* Fix Jenkins' GPU tests.
* Install dask-cuda from source in Jenkins' test.
Now all tests are actually running.
* Restore GPU Hist tree synchronization test.
* Check UUID of running devices.
The check is only performed on CUDA version >= 10.x, as 9.x doesn't have UUID field.
* Fix CMake policy and project variables.
Use xgboost_SOURCE_DIR uniformly, add policy for CMake >= 3.13.
* Fix copying data to CPU
* Fix race condition in cpu predictor.
* Fix duplicated DMatrix construction.
* Don't download extra nccl in CI script.
* Don't set_params at the end of set_state.
* Also fix another issue found in dask prediction.
* Add note about prediction.
Don't support other prediction modes at the moment.
* Initial support for cudf integration.
* Add two C APIs for consuming data and metainfo.
* Add CopyFrom for SimpleCSRSource as a generic function to consume the data.
* Add FromDeviceColumnar for consuming device data.
* Add new MetaInfo::SetInfo for consuming label, weight etc.
* Only define `gpu_id` and `n_gpus` in `LearnerTrainParam`
* Pass LearnerTrainParam through XGBoost vid factory method.
* Disable all GPU usage when GPU related parameters are not specified (fixes XGBoost choosing GPU over aggressively).
* Test learner train param io.
* Fix gpu pickling.
* Combine thread launches into single launch per tree for gpu_hist
algorithm.
* Address deprecation warning
* Add manual column sampler constructor
* Turn off omp dynamic to get a guaranteed number of threads
* Enable openmp in cuda code
* Fix test_gpu_coordinate.
* Use `gpu_coord_descent` in test.
* Reduce number of running rounds.
* Remove nthread.
* Use githubusercontent for r-appveyor.
* Use githubusercontent in travis r tests.
* Add multi-GPU unit test environment
* Better assertion message
* Temporarily disable failing test
* Distinguish between multi-GPU and single-GPU CPP tests
* Consolidate Python tests. Use attributes to distinguish multi-GPU Python tests from single-CPU counterparts
* Fix#3730: scikit-learn 0.20 compatibility fix
sklearn.cross_validation has been removed from scikit-learn 0.20,
so replace it with sklearn.model_selection
* Display test names for Python tests for clarity
* Added finding quantiles on GPU.
- this includes datasets where weights are assigned to data rows
- as the quantiles found by the new algorithm are not the same
as those found by the old one, test thresholds in
tests/python-gpu/test_gpu_updaters.py have been adjusted.
* Adjustments and improved testing for finding quantiles on the GPU.
- added C++ tests for the DeviceSketch() function
- reduced one of the thresholds in test_gpu_updaters.py
- adjusted the cuts found by the find_cuts_k kernel
* Fail GPU CI after test failure
* Fix GPU linear tests
* Reduced number of GPU tests to speed up CI
* Remove static allocations of device memory
* Resolve illegal memory access for updater_fast_hist.cc
* Fix broken r tests dependency
* Update python install documentation for GPU
