158 Commits

Author SHA1 Message Date
Vadim Khotilovich
a375ad2822 [R] maintenance Apr 2017 (#2237)
* [R] make sure things work for a single split model; fixes #2191

* [R] add option use_int_id to xgb.model.dt.tree

* [R] add example of exporting tree plot to a file

* [R] set save_period = NULL as default in xgboost() to be the same as in xgb.train; fixes #2182

* [R] it's a good practice after CRAN releases to bump up package version in dev

* [R] allow xgb.DMatrix construction from integer dense matrices

* [R] xgb.DMatrix: silent parameter; improve documentation

* [R] xgb.model.dt.tree code style changes

* [R] update NEWS with parameter changes

* [R] code safety & style; handle non-strict matrix and inherited classes of input and model; fixes #2242

* [R] change to x.y.z.p R-package versioning scheme and set version to 0.6.4.3

* [R] add an R package versioning section to the contributors guide

* [R] R-package/README.md: clean up the redundant old installation instructions, link the contributors guide
2017-05-01 22:51:34 -07:00
avpronkin
31e800f340 erratum in index.md (#2203)
Mxnet instead of XGBoost
2017-04-17 15:24:18 -07:00
Denis M Korzhenkov
332aea26a3 Formatting fixed for CLI parameters (#2145)
Fixed list of parameters format for CLI mode
2017-03-24 08:54:58 -07:00
Tianqi Chen
d581a3d0e7 [UPDATE] Update rabit and threadlocal (#2114)
* [UPDATE] Update rabit and threadlocal

* minor fix to make build system happy

* upgrade requirement to g++4.8

* upgrade dmlc-core

* update travis
2017-03-16 18:48:37 -07:00
Shaform
15456c7882 Remove deprecated prefix bst: (#2091) 2017-03-09 09:06:37 -08:00
ANtlord
f054d812dc Fix typo in Python Package Introduction (#2023)
Fixed #2016
2017-02-08 23:35:13 -05:00
Vadim Khotilovich
2b5b96d760 [R] various R code maintenance (#1964)
* [R] xgb.save must work when handle in nil but raw exists

* [R] print.xgb.Booster should still print other info when handle is nil

* [R] rename internal function xgb.Booster to xgb.Booster.handle to make its intent clear

* [R] rename xgb.Booster.check to xgb.Booster.complete and make it visible; more docs

* [R] storing evaluation_log should depend only on watchlist, not on verbose

* [R] reduce the excessive chattiness of unit tests

* [R] only disable some tests in windows when it's not 64-bit

* [R] clean-up xgb.DMatrix

* [R] test xgb.DMatrix loading from libsvm text file

* [R] store feature_names in xgb.Booster, use them from utility functions

* [R] remove non-functional co-occurence computation from xgb.importance

* [R] verbose=0 is enough without a callback

* [R] added forgotten xgb.Booster.complete.Rd; cran check fixes

* [R] update installation instructions
2017-01-21 11:22:46 -08:00
Vadim Khotilovich
d23ea5ca7d An option for doing binomial+1 or epsilon-dropout from DART paper (#1922)
* An option for doing binomial+1 or epsilon-dropout from DART paper

* use callback-based discrete_distribution to make MSVC2013 happy
2017-01-05 16:23:22 -08:00
Kyle Willett
7e07b2b93d Correcting small typos in documentation. (#1901) 2016-12-31 20:47:51 +08:00
Matthew Drury
edc356f7ec Add monotonic tutorial. (#1870) 2016-12-14 20:17:19 -06:00
Vadim Khotilovich
a44032d095 [CORE] The update process for a tree model, and its application to feature importance (#1670)
* [CORE] allow updating trees in an existing model

* [CORE] in refresh updater, allow keeping old leaf values and update stats only

* [R-package] xgb.train mod to allow updating trees in an existing model

* [R-package] added check for nrounds when is_update

* [CORE] merge parameter declaration changes; unify their code style

* [CORE] move the update-process trees initialization to Configure; rename default process_type to 'default'; fix the trees and trees_to_update sizes comparison check

* [R-package] unit tests for the update process type

* [DOC] documentation for process_type parameter; improved docs for updater, Gamma and Tweedie; added some parameter aliases; metrics indentation and some were non-documented

* fix my sloppy merge conflict resolutions

* [CORE] add a TreeProcessType enum

* whitespace fix
2016-12-04 09:33:52 -08:00
Nat Wilson
4398fbbe4a fix typo on documentation page (#1836)
replaces "Lanuages" -> "Languages"
2016-12-03 14:41:30 -08:00
Dr. Kashif Rasul
da2556f58a fixed some typos (#1814) 2016-11-25 16:34:57 -05:00
Alexey Grigorev
80e70c56b9 [jvm-packages] xgboost4j: publishing sources along with bins (#1797)
* xgboost4j: publishing sources along with bins

* description about building maven artifacts

* publishing scala source to local m2 as well
2016-11-21 15:02:57 -05:00
Simon DENEL
58aa1129ea Fixing a few typos (#1771)
* Fixing a few typos

* Fixing a few typos
2016-11-13 15:47:52 -08:00
Richard Wong
b9a9d2bf45 Style fixes in Python documentation. (#1764) 2016-11-11 09:26:28 -08:00
Tony DiFranco
2ad0948444 Tweedie Regression Post-Rebase (#1737)
* add support for tweedie regression

* added back readme line that was accidentally deleted

* fixed linting errors

* add support for tweedie regression

* added back readme line that was accidentally deleted

* fixed linting errors

* rebased with upstream master and added R example

* changed parameter name to tweedie_variance_power

* linting error fix

* refactored tweedie-nloglik metric to be more like the other parameterized metrics

* added upper and lower bound check to tweedie metric

* add support for tweedie regression

* added back readme line that was accidentally deleted

* fixed linting errors

* added upper and lower bound check to tweedie metric

* added back readme line that was accidentally deleted

* rebased with upstream master and added R example

* rebased again on top of upstream master

* linting error fix

* added upper and lower bound check to tweedie metric

* rebased with master

* lint fix

* removed whitespace at end of line 186 - elementwise_metric.cc
2016-11-05 17:02:32 -07:00
AbdealiJK
52b9867be5 Add docs fro update_seq (#1735)
* Fix typos and messages in docs

* parameter.md: Add docs for updater_seq

Mention the updater_seq parameter which sets the order of the tree
updaters to run and also specifies which ones to run. This can be
useful when pruning is not required or even a custom plugin is
being built along with xgboost.
2016-11-04 16:07:29 -07:00
Alireza Bagheri Garakani
9c693f0f5f scale_pos_weight default value (#1712)
Should say 1 (not 0)
2016-11-03 12:52:26 -07:00
David Lichtenberg
8156b71912 Typo is OSX installation instructions (#1718)
The `cd ..;` in the one liner takes you up a directory instead of into the xgboost directory. This will cause that step of the installation to fail. It seems like you are meant to enter the xgboost directory as you did in the instructions for installing xgboost without openmp.
2016-11-03 12:52:16 -07:00
Nan Zhu
f12074d355 [jvm-packages] release blog (#1706) 2016-10-26 21:35:42 -04:00
Guido Tapia
b0bfddba72 Update build.md - added link to nightly windows binaries (#1601)
Apologies for 2 PRs, was easier using githubs interface rather than doing it through git
2016-09-21 23:13:56 -07:00
Manuel Schiller
d3c4d19c91 fix spelling mistake (#1584) 2016-09-18 09:52:01 -07:00
Nan Zhu
fb02797e2a [jvm-packages] Integration with Spark Dataframe/Dataset (#1559)
* bump up to scala 2.11

* framework of data frame integration

* test consistency between RDD and DataFrame

* order preservation

* test order preservation

* example code and fix makefile

* improve type checking

* improve APIs

* user docs

* work around travis CI's limitation on log length

* adjust test structure

* integrate with Spark -1 .x

* spark 2.x integration

* remove spark 1.x implementation but provide instructions on how to downgrade
2016-09-11 15:02:58 -04:00
Dex Groves
6014839961 Fix minor typos in parameters.md (#1521) 2016-08-29 09:02:03 -04:00
Francesco Mosconi
d754ce7dc1 Fixed OpenMP installation on MacOSX with gcc-6 (#1460)
* Fixed OpenMP installation on MacOSX with gcc-6

- Modified makefile from gcc-5 to gcc-6
- Removed deprecated install instructions from doc (gcc-5 was automatically forced if available in makefile on OSX)

* Fixed OpenMP installation on MacOSX with gcc-6

- Modified makefile from gcc-5 to gcc-6
- Removed deprecated install instructions from doc (gcc-5 was automatically forced if available in makefile on OSX)
2016-08-22 10:30:34 -07:00
Frank
93e85139bc fix #1476 (#1494) 2016-08-20 17:27:57 -07:00
Shuyu Liang
d85e287b99 Fix #1464 (#1468)
1. Remove the extra ` to fix https://xgboost.readthedocs.io/en/latest/build.html
2. Use ` for inline code
2016-08-18 11:57:13 -07:00
ZhuWen
59246350ca Fixed syntax error in https://xgboost.readthedocs.io/en/latest/build.html. (#1477) 2016-08-18 14:51:30 -04:00
hxd1011
c529cac6ff Update model.md (#1461)
make math better, specifically, unify the notation for Theta or theta. changed basic linear model notation from weight w to theta to make more consistent. Changed Obj function notation also
2016-08-12 16:43:07 -05:00
Bargava
62e5b6b8b3 updating Mac installation instructions (#1443)
In Mac, even after gcc is installed from homebrew, gcc and g++ still point to clang's version. 

Need to update the make/config.mk file to point the gcc and g++ compliers to the version installed by homebrew. 

More details can be found in this blog: https://www.ibm.com/developerworks/community/blogs/jfp/entry/Installing_XGBoost_on_Mac_OSX?lang=en
2016-08-08 09:20:15 -07:00
Tianqi Chen
37e29976cc Update param_tuning.md 2016-08-01 10:48:00 -07:00
Tianqi Chen
c3eb4f7000 Move model doc images to web-data (#1397) 2016-07-23 23:53:22 -07:00
Shengwen Yang
7089301b62 Metrics for gamma regression (#1369)
* Add deviance metric for gamma regression

* Simplify the computation of nloglik for gamma regression

* Add a description for gamma-deviance

* Minor fix
2016-07-18 09:10:44 -05:00
marugari
c332eb5a2b add Dart tutorial 2016-07-10 20:12:42 +09:00
Shengwen Yang
77d17f6264 Add support for Gamma regression (#1258)
* Add support for Gamma regression

* Use base_score to replace the lp_bias

* Remove the lp_bias config block

* Add a demo for running gamma regression in Python

* Typo fix

* Revise the description for objective

* Add a script to generate the autoclaims dataset
2016-07-06 10:22:46 -07:00
Ryan Curtin
f74e2439e0 Fix spelling error. (#1331) 2016-07-05 12:58:24 -07:00
RAMitchell
f8d23b97be Add build instructions for Visual Studio 2013 (#1327) 2016-07-03 21:30:50 -07:00
Yoshinori Nakano
7cfeb5f012 fix Dart::NormalizeTrees (#1265) 2016-06-09 15:28:24 -07:00
Yoshinori Nakano
949d1e3027 add Dart booster (#1220) 2016-06-08 14:04:01 -07:00
Nan Zhu
c6631ad2ed specify spark version (#1224) 2016-05-24 18:19:32 -04:00
Nan Zhu
c85b9012c6 [jvm-packages] xgboost4j-spark external memory (#1219)
* implement external memory support for XGBoost4J

* remove extra space

* enable external memory for prediction

* update doc
2016-05-22 14:01:28 -04:00
tqchen
2c0c06639c add style 2016-05-20 13:11:27 -07:00
tqchen
84ae514d7e [DOC] refactor doc 2016-05-20 13:09:42 -07:00
Tianqi Chen
9c26566eb0 Merge pull request #1190 from geneorama/geneorama-patch-1
add `scale_pos_weight` to parameter documentation
2016-05-11 15:06:21 -07:00
Sean Löfgren
bf322322fe make grammar and spelling fixes to build doc 2016-05-11 22:56:29 +01:00
Gene Leynes
2e7abffffb add scale_pos_weight to parameter documentation 2016-05-11 14:10:36 -05:00
Saiwing Yeung
28cdc10259 Fixed a typo (#1172)
panda -> Pandas
2016-05-03 19:29:22 -05:00
Tianqi Chen
4149854633 Merge pull request #1068 from Laurae2/master
Updated obsolete installation instructions
2016-04-26 19:50:06 -07:00
hxd1011
04ace6311b Update parameter.md
add some detail how the parameter will affect model complexity, and comment on the base score.
2016-04-22 14:42:11 -04:00