* Make CMakeLists.txt compatible with CMake 3.3; require CMake 3.11 for MSVC
* Use CMake 3.12 when sanitizer is enabled
* Disable funroll-loops for MSVC
* Use cmake version in container name
* Add missing arg
* Fix egrep use in ci_build.sh
* Display CMake version
* Do not set OpenMP_CXX_LIBRARIES for MSVC
* Use cmake_minimum_required()
* Use feature interaction constraints to narrow search space for split candidates.
* fix clang-tidy broken at updater_quantile_hist.cc:535:3
* make const
* fix
* try to fix exception thrown in java_test
* fix suspected mistake which cause EvaluateSplit error
* try fix
* Fix bug: feature ID and node ID swapped in argument
* Rename CheckValidation() to CheckFeatureConstraint() for clarity
* Do not create temporary vector validFeatures, to enable parallelism
* Combine thread launches into single launch per tree for gpu_hist
algorithm.
* Address deprecation warning
* Add manual column sampler constructor
* Turn off omp dynamic to get a guaranteed number of threads
* Enable openmp in cuda code
* All Linux tests are now in Jenkins CI
* Tests are now de-coupled from builds. We can now build XGBoost with one version of CUDA/JDK and test it with another version of CUDA/JDK
* Builds (compilation) are significantly faster because 1) They use C5 instances with faster CPU cores; and 2) build environment setup is cached using Docker containers
* fix the nan and non-zero missing value handling
* fix nan handling part
* add missing value
* Update MissingValueHandlingSuite.scala
* Update MissingValueHandlingSuite.scala
* stylistic fix
* [jvm-packages][hot-fix] fix column mismatch caused by zip actions at XGBooostModel.transformInternal
* apply minibatch in prediction
* an iterator-compatible minibatch prediction
* regressor impl
* continuous working on mini-batch prediction of xgboost4j-spark
* Update Booster.java
* Refactor CMake scripts.
* Remove CMake CUDA wrapper.
* Bump CMake version for CUDA.
* Use CMake to handle Doxygen.
* Split up CMakeList.
* Export install target.
* Use modern CMake.
* Remove build.sh
* Workaround for gpu_hist test.
* Use cmake 3.12.
* Revert machine.conf.
* Move CLI test to gpu.
* Small cleanup.
* Support using XGBoost as submodule.
* Fix windows
* Fix cpp tests on Windows
* Remove duplicated find_package.
* [r-package] cut CI-time dependency on craigcitro/r-travis (fixes#4348)
* Install R
* Install R on OSX
* Remove gfortran symlink
* Specify CRAN repo
* added more R dependencies needed for testing
* removed heavy R dependencies in CI
* fixed bug in env var, removed unnecessary apt installs of R
* fix to R installs
The old NativeLibLoader had a short-circuit load path which modified
java.library.path and attempted to load the xgboost library from outside
the jar first, falling back to loading the library from inside the jar.
This path is a no-op every time when using XGBoost outside of it's
source tree. Additionally it triggers an illegal reflective access
warning in the module system in 9, 10, and 11.
On Java 12 the ClassLoader fields are not accessible via reflection
(separately from the illegal reflective acces warning), and so it fails
in a way that isn't caught by the code which falls back to loading the
library from inside the jar.
This commit removes that code path and always loads the xgboost library
from inside the jar file as it's a valid technique across multiple JVM
implementations and works with all versions of Java.
* Fix Histogram allocation.
nidx_map is cleared after `Reset`, but histogram data size isn't changed hence
histogram recycling is used in later iterations. After a reset(building new
tree), newly allocated node will start from 0, while recycling always choose
the node with smallest index, which happens to be our newly allocated node 0.
* When building pull requests, use Docker cache for master branch
Docker build caches are per-branch, so new pull requests will initially
have no build cache, causing the Docker containers to be built from
scratch. New pull requests should use the cache associated with the
master branch. This makes sense, since most pull requests do not modify
the Dockerfile.
* Add comments
* make the assignments of HostDeviceVector exception safe.
* storing a dummy GPUDistribution instance in HDV for CPU based code.
* change testxgboost binary location to build directory.
