Hendrik/xgboost
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288 Commits

Author SHA1 Message Date
Hui Liu
8b75204fed merge latest change from upstream 2024-04-22 09:35:31 -07:00
Philip Hyunsu Cho
32be4669fb
[jvm-packages] Ombinus patch to update all minor dependencies (#10188) 
* Fold in #10184

* Fold in #10176

* Fold in #10168

* Fold in #10165

* Fold in #10164

* Fold in #10155

* Fold in #10062

* Fold in #9984

* Fold in #9843

* Upgrade to Maven 3.6.3
 2024-04-16 19:43:04 -07:00
github-actions[bot]
2925cebdca
[CI] Use latest RAPIDS; Pandas 2.0 compatibility fix (#10175) 
* [CI] Update RAPIDS to latest stable

* [CI] Use rapidsai stable channel; fix syntax errors in Dockerfile.gpu

* Don't combine astype() with loc()

* Work around https://github.com/dmlc/xgboost/issues/10181

* Fix formatting

* Fix test

---------

Co-authored-by: hcho3 <hcho3@users.noreply.github.com>
Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2024-04-15 13:38:53 -07:00
Hui Liu
ff549ae933 sync upstream code 2024-03-20 16:14:38 -07:00
Jiaming Yuan
ca4801f81d
Work with IPv6 in the new tracker. (#10125) 2024-03-20 05:19:23 +08:00
Hui Liu
968dbf25fb merge latest changes 2024-03-12 09:13:09 -07:00
Philip Hyunsu Cho
23a37dcaf9
[CI] Test R package with CMake (#10087) 
* [CI] Test R package with CMake

* Fix

* Fix

* Update test_r_package.py

* Fix CMake flag for R package

* Install system deps

* Fix

* Use sudo
 2024-03-04 12:32:44 -08:00
Jiaming Yuan
8ea705e4d5
Support sample weight in sklearn custom objective. (#10050) 2024-02-21 00:43:14 +08:00
Hui Liu
44db1cef54 Merge branch 'master' into sync-2024Jan24 2024-02-01 14:41:48 -08:00
Philip Hyunsu Cho
4dfbe2a893
[CI] Test building for 32-bit arch (#10021) 
* [CI] Test building for 32-bit arch

* Update CMakeLists.txt

* Fix yaml

* Use Debian container

* Remove -Werror for 32-bit

* Revert "Remove -Werror for 32-bit"

This reverts commit c652bc6a037361bcceaf56fb01863210b462793d.

* Don't error for overloaded-virtual warning

* Ignore some warnings from dmlc-core

* Fix compiler warnings

* Fix formatting

* Apply suggestions from code review

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>

* Add more cast

---------

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2024-01-31 13:20:51 -08:00
Jiaming Yuan
54b71c8fba
Fix with black 24.1.1. (#10014) 2024-01-30 17:24:11 +08:00
Hui Liu
3fe874078c merge latest changes 2024-01-24 13:30:08 -08:00
Jiaming Yuan
d12cc1090a
Refactor tests for training continuation. (#9997) 2024-01-24 16:07:19 +08:00
Philip Hyunsu Cho
2c8fa8b8b9
[CI] Skip MSVC when building R package (#9995) 
* [CI] Skip MSVC when building R package

* [CI] Stop building binary tarball for Windows

* Remove unused script
 2024-01-18 08:09:53 -08:00
Jiaming Yuan
0798e36d73
[breaking] Remove deprecated parameters in the skl interface. (#9986) 2024-01-15 20:40:05 +08:00
Philip Hyunsu Cho
1168a68872
[jvm-packages] Update release scripts (#9983) 
* [jvm-packages] Add Scala version suffix to xgboost-jvm package (#9776)

* Update JVM script (#9714)

* Revamp pom.xml

* Update instructions in prepare_jvm_release.py

* Fix formatting

* [jvm-packages] Fix POM for xgboost-jvm metapackage (#9893)

* [jvm-packages] Fix POM for xgboost-jvm metapackage

* Add script for updating the Scala version

* Update change_scala_version.py to also change scala.version property (#9897)

* Remove 'release-cpu-only' profile

* Remove scala-2.13 profile; enable gpu package for Scala 2.13
 2024-01-12 10:37:55 -08:00
Hui Liu
1e1e8be3a5 merge latest, Jan 12 2024 2024-01-12 09:57:11 -08:00
Jiaming Yuan
b3eb5d0945
Use UBJ in Python checkpoint. (#9958) 2024-01-09 03:22:15 +08:00
Jiaming Yuan
38dd91f491
Save model in ubj as the default. (#9947) 2024-01-05 17:53:36 +08:00
Jiaming Yuan
621348abb3
Fix multi-output with alternating strategies. (#9933) 
---------

Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2024-01-04 16:41:13 +08:00
Jiaming Yuan
9f73127a23
Cleanup Python GPU tests. (#9934) 
* Cleanup Python GPU tests.

- Remove the use of `gpu_hist` and `gpu_id` in cudf/cupy tests.
- Move base margin test into the testing directory.
 2024-01-04 13:15:18 +08:00
Philip Hyunsu Cho
ef8bdaa047
[CI] Update machine images (#9932) 2023-12-29 11:15:38 -08:00
Hui Liu
2d7ffbdf3d merge latest changes 2023-12-13 21:06:28 -08:00
Jiaming Yuan
4bc1f3a388
[R] Bump requirement to 4.3.0. (#9847) 2023-12-07 00:12:45 +08:00
Dmitry Razdoburdin
381f1d3dc9
Add support inference on SYCL devices (#9800) 
---------

Co-authored-by: Dmitry Razdoburdin <>
Co-authored-by: Nikolay Petrov <nikolay.a.petrov@intel.com>
Co-authored-by: Alexandra <alexandra.epanchinzeva@intel.com>
 2023-12-04 16:15:57 +08:00
Jiaming Yuan
e78b46046e
[CI] Update R version on Linux. (#9835) 2023-12-02 11:03:17 +08:00
Jiaming Yuan
0715ab3c10
Use dlopen to load NCCL. (#9796) 
This PR adds optional support for loading nccl with `dlopen` as an alternative of compile time linking. This is to address the size bloat issue with the PyPI binary release.
- Add CMake option to load `nccl` at runtime.
- Add an NCCL stub.

After this, `nccl` will be fetched from PyPI when using pip to install XGBoost, either by a user or by `pyproject.toml`. Others who want to link the nccl at compile time can continue to do so without any change.

At the moment, this is Linux only since we only support MNMG on Linux.
 2023-11-22 19:27:31 +08:00
Jiaming Yuan
82828621d0
[doc] Add doc for linters and simplify c++ lint script. (#9750) 2023-11-07 05:03:30 +08:00
Hui Liu
24be98f61f Merge branch 'master' into sync-condition-2023Oct11 2023-10-23 21:29:54 -07:00
Jiaming Yuan
3ca06ac51e
[doc] Mention data consistency for categorical features. (#9678) 2023-10-24 10:11:33 +08:00
Hui Liu
55994b1ac7 enable ROCm on latest XGBoost 2023-10-23 11:15:04 -07:00
Hui Liu
15421e40d9 enable ROCm on latest XGBoost 2023-10-23 11:07:08 -07:00
Philip Hyunsu Cho
5e6cb63a56
[CI] Set up CI for Mac M1 (#9699) 2023-10-22 23:33:19 -07:00
Rong Ou
6fbe6248f4
More in-memory input support for column split (#9685) 2023-10-20 16:02:36 +08:00
Chuck Atkins
83cdf14b2c
CMake LTO and CUDA arch (#9677) 2023-10-20 13:01:37 +08:00
Philip Hyunsu Cho
a5e07a01f8
[CI] Pull CentOS 7 images from NGC (#9666) 2023-10-13 12:11:54 +08:00
Your Name
ea19555474 temp merge, disable 1 line, SetValid 2023-10-12 16:16:44 -07:00
github-actions[bot]
d1dee4ad99
[CI] Update RAPIDS to latest stable (#9654) 
* [CI] Update RAPIDS to latest stable

* Remove slashes from Docker tag

---------

Co-authored-by: hcho3 <hcho3@users.noreply.github.com>
Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2023-10-11 23:26:09 -07:00
James Lamb
51e32e4905
[CI] add cmakelint to C++ linting task (#9641) 
Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2023-10-11 16:04:10 +08:00
Jiaming Yuan
4e5a7729c3
Fix lint errors. (#9634) 2023-10-09 19:04:31 +08:00
James Lamb
799f8485e2
[R] [CI] enforce lintr::function_left_parentheses_linter check (#9631) 2023-10-08 09:42:09 +08:00
Jiaming Yuan
cac2cd2e94
[R] Set number of threads in demos and tests. (#9591) 
- Restrict the number of threads in IO.
- Specify the number of threads in demos and tests.
- Add helper scripts for checks.
 2023-09-23 21:44:03 +08:00
Jiaming Yuan
e6cf7a1278
Deprecate the command line interface. (#9485) 
---------

Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2023-08-21 06:47:48 +08:00
Jiaming Yuan
db87d481bc
[R] Differentiate dev version with release version. (#9503) 
Use 2.1.0.0 as development version, we will change it to 2.1.0.1 during release.
 2023-08-20 02:58:58 +08:00
github-actions[bot]
f03463c45b
[CI] Update RAPIDS to latest stable (#9464) 
* [CI] Update RAPIDS to latest stable

* [CI] Use CMake 3.26.4

---------

Co-authored-by: hcho3 <hcho3@users.noreply.github.com>
Co-authored-by: Hyunsu Philip Cho <chohyu01@cs.washington.edu>
 2023-08-13 18:54:37 -07:00
James Lamb
4359356d46
[R] [CI] use lintr 3.1.0 (#9456) 2023-08-10 17:49:16 +08:00
Jiaming Yuan
f05a23b41c
Use weakref instead of id for DataIter cache. (#9445) 
- Fix case where Python reuses id from freed objects.
- Small optimization to column matrix with QDM by using `realloc` instead of copying data.
 2023-08-10 00:40:06 +08:00
Jiaming Yuan
c1b2cff874
[CI] Check compiler warnings. (#9444) 2023-08-08 12:02:45 -07:00
Philip Hyunsu Cho
7ce090e775
Handle UTF-8 paths correctly on Windows platform (#9443) 
* Fix round-trip serialization with UTF-8 paths

* Add compiler version check

* Add comment to C API functions

* Add Python tests

* [CI] Updatre MacOS deployment target

* Use std::filesystem instead of dmlc::TemporaryDirectory
 2023-08-07 23:27:25 -07:00
Jiaming Yuan
851cba931e
Define best_iteration only if early stopping is used. (#9403) 
* Define `best_iteration` only if early stopping is used.

This is the behavior specified by the document but not honored in the actual code.

- Don't set the attributes if there's no early stopping.
- Clean up the code for callbacks, and replace assertions with proper exceptions.
- Assign the attributes when early stopping `save_best` is used.
- Turn the attributes into Python properties.

---------

Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2023-07-24 12:43:35 +08:00