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create-pull-request/update-rapids
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834 Commits
Author SHA1 Message Date
Jiaming Yuan e6088366df Export Python Interface for external memory. (#7070) 
* Add Python iterator interface.
* Add tests.
* Add demo.
* Add documents.
* Handle empty dataset.
 2021-07-22 15:15:53 +08:00
Jiaming Yuan 2f524e9f41 [dask] Work around segfault in prediction. (#7112) 2021-07-16 04:27:05 +08:00
Jiaming Yuan 5d7cdf2e36 [Breaking] Rename Quantile DMatrix C API. (#7082) 
The role of ProxyDMatrix is going beyond what it was designed.  Now it's used by both
QuantileDeviceDMatrix and inplace prediction.  After the refactoring of sparse DMatrix it
will also be used for external memory.  Renaming the C API to extract it from
QuantileDeviceDMatrix.
 2021-07-08 11:34:14 +08:00
Jiaming Yuan f937f514aa Remove lz4 compression with external memory. (#7076) 2021-07-06 14:46:43 +08:00
Jiaming Yuan b56d3d5d5c Fix with latest panda range index. (#7074) 2021-07-03 16:43:52 +08:00
Jiaming Yuan 93f3acdef9 Fix with latest pylint. (#7071) 2021-07-02 21:26:00 +08:00
Jiaming Yuan a5d222fcdb Handle categorical split in model histogram and dataframe. (#7065) 
* Error on get_split_value_histogram when feature is categorical
* Add a category column to output dataframe
 2021-07-02 13:10:36 +08:00
Philip Hyunsu Cho dd4db347f3 Fix early stopping behavior with MAPE metric (#7061) 2021-06-26 03:02:33 +08:00
Jiaming YuanandPhilip Hyunsu Cho 663136aa08 Implement feature score for linear model. (#7048) 
* Add feature score support for linear model.
* Port R interface to the new implementation.
* Add linear model support in Python.

Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2021-06-25 14:34:02 +08:00
Jiaming Yuan 1d4d345634 Tests for dask skl categorical data support. (#7054) 2021-06-24 16:33:57 +08:00
Jiaming Yuan da1ad798ca Convert numpy float to Python float in feat score. (#7047) 2021-06-21 20:58:43 +08:00
Jiaming Yuan 29f8fd6fee Support categorical split in tree model dump. (#7036) 2021-06-18 16:46:20 +08:00
Jiaming Yuan 86715e4cd4 Support categorical data for dask functional interface and DQM. (#7043) 
* Support categorical data for dask functional interface and DQM.

* Implement categorical data support for GPU GK-merge.
* Add support for dask functional interface.
* Add support for DQM.

* Get newer cupy.
 2021-06-18 13:06:52 +08:00
Jiaming Yuan 7dd29ffd47 Implement feature score in GBTree. (#7041) 
* Categorical data support.
* Eliminate text parsing during feature score computation.
 2021-06-18 11:53:16 +08:00
Jiaming Yuan d9799b09d0 Categorical data support for cuDF. (#7042) 
* Add support in DMatrix.
* Add support in DQM, except for iterator.
 2021-06-17 13:54:33 +08:00
Jiaming Yuan b56614e9b8 [R] Use new predict function. (#6819) 
* Call new C prediction API.
* Add `strict_shape`.
* Add `iterationrange`.
* Update document.
 2021-06-11 13:03:29 +08:00
Jiaming Yuan c4b9f4f622 Add enable_categorical to sklearn. (#7011) 2021-06-04 02:29:14 +08:00
Jiaming Yuan ee4f51a631 Support for all primitive types from array. (#7003) 
* Change C API name.
* Test for all primitive types from array.
* Add native support for CPU 128 float.
* Convert boolean and float16 in Python.

* Fix dask version for now.
 2021-06-01 08:34:48 +08:00
Jiaming Yuan 816b789bf0 Add predictor to skl constructor. (#7000) 2021-05-29 04:52:56 +08:00
Jiaming Yuan 89a49cf30e Fix dask predict on DaskDMatrix with iteration_range. (#7005) 2021-05-29 04:43:12 +08:00
Jiaming Yuan 4cf95a6041 Support numpy array interface (#6998) 2021-05-27 16:08:22 +08:00
Jiaming Yuan ab6fd304c4 [Python] Change development release postfix to dev (#6988) 2021-05-27 16:06:51 +08:00
Jiaming Yuan 86e60e3ba8 Guard against index error in prediction. (#6982) 
* Remove `best_ntree_limit` from documents.
 2021-05-25 23:24:59 +08:00
Mads R. B. Kristensen 81bdfb835d lazy_isinstance(): use .__class__ for type check (#6974) 2021-05-21 11:33:08 +08:00
Jiaming Yuan 7e846bb965 Fix prediction on df with latest dask. (#6969) 2021-05-19 12:23:03 +08:00
Jiaming Yuan d245bc891e Add tolerance to early stopping. (#6942) 2021-05-14 00:19:51 +08:00
Jiaming Yuan 05ac415780 [dask] Set dataframe index in predict. (#6944) 2021-05-12 13:24:21 +08:00
vslaykovsky 2a9979e256 Fixed incorrect feature mismatch error message (#6949) 
data.shape[0] denotes the number of samples, data.shape[1] is the number of features
 2021-05-11 13:52:11 +08:00
Daniel Saxton e41619b1fc Link to valid tree_method values in docs (#6935) 2021-05-06 17:33:18 +08:00
Jose Manuel Llorens 4ddbaeea32 Improve warning when using np.ndarray subsets (#6934) 2021-05-04 13:24:41 +08:00
Jiaming Yuan 37ad60fe25 Enforce input data is not object. (#6927) 
* Check for object data type.
* Allow strided arrays with greater underlying buffer size.
 2021-05-02 00:09:01 +08:00
Jiaming Yuan ef473b1f09 Disable pylint error. (#6911) 2021-04-29 01:01:37 +08:00
Jiaming Yuan a2ecbdaa31 Add an API guard to prevent global variables being changed. (#6891) 2021-04-23 10:27:57 +08:00
Jiaming Yuan 233bdf105f Remove setDaemon in tracker. (#6872) 2021-04-22 01:57:13 +08:00
Jiaming Yuan 146549260a Bump version to 1.5.0 snapshot in master. (#6875) 2021-04-22 01:53:44 +08:00
Jiaming Yuan a5d7094a45 Update documents. (#6856) 
* Add early stopping section to prediction doc.
* Remove best_ntree_limit.
* Better doxygen output.
 2021-04-16 12:41:03 +08:00
Jiaming Yuan dee5ef2dfd Typehint for Sklearn. (#6799) 2021-04-14 06:55:21 +08:00
giladmayaandfis aa0d8f20c1 Support configuring constraints by feature names (#6783) 
Co-authored-by: fis <jm.yuan@outlook.com>
 2021-04-04 06:53:33 +08:00
Jiaming Yuan 7e06c81894 Fix approximated predict contribution. (#6811) 2021-04-03 02:15:03 +08:00
Jiaming Yuan 0cced530ea [doc] Clarify prediction function. (#6813) 2021-04-03 02:12:04 +08:00
Jiaming YuanandPhilip Hyunsu Cho 47b62480af More general predict proba. (#6817) 
* Use `output_margin` for `softmax`.
* Add test for dask binary cls.

Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2021-04-01 19:52:12 +08:00
Jiaming Yuan a5c852660b Update document for sklearn model IO. (#6809) 
* Update the use of JSON.
* Remove unnecessary type cast.
 2021-04-01 15:52:36 +08:00
Jiaming Yuan 10ae0f9511 Fix doc for apply method. (#6796) 2021-03-31 15:28:31 +08:00
James Lamb f01af43eb0 [dask] disable work stealing explicitly for training tasks (#6794) 2021-03-29 16:47:56 +08:00
Jiaming Yuan 4ee8340e79 Support column major array. (#6765) 2021-03-20 05:19:46 +08:00
Jiaming Yuan 325bc93e16 [dask] Use distributed.MultiLock (#6743) 
* [dask] Use `distributed.MultiLock`

This enables training multiple models in parallel.

* Conditionally import `MultiLock`.
* Use async train directly in scikit learn interface.
* Use `worker_client` when available.
 2021-03-16 14:19:41 +08:00
Jiaming Yuan a9b4a95225 Fix learning rate scheduler with cv. (#6720) 
* Expose more methods in cvpack and packed booster.
* Fix cv context in deprecated callbacks.
* Fix document.
 2021-02-28 13:57:42 +08:00
Jiaming Yuan 9da2287ab8 [breaking] Save booster feature info in JSON, remove feature name generation. (#6605) 
* Save feature info in booster in JSON model.
* [breaking] Remove automatic feature name generation in `DMatrix`.

This PR is to enable reliable feature validation in Python package.
 2021-02-25 18:54:16 +08:00
capybaraandfis b6167cd2ff [dask] Use client to persist collections (#6722) 
Co-authored-by: fis <jm.yuan@outlook.com>
 2021-02-25 16:40:38 +08:00
Jiaming Yuan c375173dca Support pylint 2.7.0 (#6726) 2021-02-25 12:49:58 +08:00