100 Commits

Author SHA1 Message Date
AbdealiJK
fa865564f6 tests/cpp: Add tests for GammaRegression 2016-12-04 11:25:57 -08:00
AbdealiJK
401e4b5220 tests/cpp: Add tests for PoissonRegression 2016-12-04 11:25:57 -08:00
AbdealiJK
d41aab4f61 tests/cpp: Add tests for regression_obj.cc
Test the objective functions in regression_obj.cc

tests/cpp: Add tests for objective.cc and RegLossObj
2016-12-04 11:25:57 -08:00
AbdealiJK
fd99d39372 tests/cpp: Add tests for SplitEntry 2016-12-04 11:25:57 -08:00
AbdealiJK
62e3468603 tests/cpp: Add tests for param.h 2016-12-04 11:25:57 -08:00
AbdealiJK
d6407c3746 tests/cpp: Add tests for SparsePageDMatrix
The SparsePageDMatrix or external memory DMatrix reads data from the
file IO rather than load it into RAM.
2016-12-04 11:25:57 -08:00
AbdealiJK
c3629c91d3 tests/cpp: Add tests for SimpleCSRSource
Test the binary format saved and read by a SimpleDMatrix, which is
internally the SimpleCSRSource.
2016-12-04 11:25:57 -08:00
AbdealiJK
be0f55d563 tests/cpp: Add tests for SimpleDMatrix 2016-12-04 11:25:57 -08:00
AbdealiJK
ef7fe06cf8 tests/cpp/test_metainfo: Add tests to save and load 2016-12-04 11:25:57 -08:00
AbdealiJK
8eb69e0677 travis: Add code coverage on success
Update the code coverage of the project on codecov for easy viewing.

Also the gcov on travis uses a different version which cannot
find the directory of the given files, and it needs to be specified
in the -o flag. Hence now we loop over the list of files and
run them independently.
2016-12-04 11:25:57 -08:00
AbdealiJK
61a9b3a49e travis: Run CPP tests 2016-12-04 11:25:57 -08:00
AbdealiJK
006f9e0760 Makefile: Add CPP code coverage 2016-12-04 11:25:57 -08:00
AbdealiJK
1f2ad36bad Add make commands for tests
This adds the make commands required to build and run tests.
2016-12-04 11:25:57 -08:00
Yuan (Terry) Tang
090b37e85d Bumped up err assert in glm test (#1792) 2016-11-20 18:23:19 -06:00
Tianqi Chen
060a0ac396 Update setup.sh 2016-11-19 17:57:47 -08:00
Tianqi Chen
aa841ee58d Update setup.sh 2016-11-19 17:56:36 -08:00
AbdealiJK
b94fcab4dc Add dump_format=json option (#1726)
* Add format to the params accepted by DumpModel

Currently, only the test format is supported when trying to dump
a model. The plan is to add more such formats like JSON which are
easy to read and/or parse by machines. And to make the interface
for this even more generic to allow other formats to be added.

Hence, we make some modifications to make these function generic
and accept a new parameter "format" which signifies the format of
the dump to be created.

* Fix typos and errors in docs

* plugin: Mention all the register macros available

Document the register macros currently available to the plugin
writers so they know what exactly can be extended using hooks.

* sparce_page_source: Use same arg name in .h and .cc

* gbm: Add JSON dump

The dump_format argument can be used to specify what type
of dump file should be created. Add functionality to dump
gblinear and gbtree into a JSON file.

The JSON file has an array, each item is a JSON object for the tree.
For gblinear:
 - The item is the bias and weights vectors
For gbtree:
 - The item is the root node. The root node has a attribute "children"
   which holds the children nodes. This happens recursively.

* core.py: Add arg dump_format for get_dump()
2016-11-04 09:55:25 -07:00
Yuan (Terry) Tang
63829d656c Fix mknfold using new StratifiedKFold API (#1660) 2016-10-12 14:43:37 -07:00
Yuan (Terry) Tang
a64fd74421 Fix wrong expected feature types (#1646) 2016-10-08 21:16:29 -07:00
Vadim Khotilovich
693ddb860e More robust DMatrix creation from a sparse matrix (#1606)
* [CORE] DMatrix from sparse w/ explicit #col #row; safer arg types

* [python-package] c-api change for _init_from_csr _init_from_csc

* fix spaces

* [R-package] adopt the new XGDMatrixCreateFromCSCEx interface

* [CORE] redirect old sparse creators to new ones
2016-09-25 10:01:22 -07:00
RAMitchell
93196eb811 cmake build system (#1314)
* Changed c api to compile under MSVC

* Include functional.h header for MSVC

* Add cmake build
2016-07-02 19:07:35 -07:00
Yoshinori Nakano
949d1e3027 add Dart booster (#1220) 2016-06-08 14:04:01 -07:00
Vadim Khotilovich
9a48a40cf1 Fixes for multiple and default metric (#1239)
* fix multiple evaluation metrics

* create DefaultEvalMetric only when really necessary

* py test for #1239

* make travis happy
2016-06-04 22:17:35 -07:00
tqchen
149589c583 [PYTHON] Refactor trainnig API to use callback 2016-05-19 21:31:23 -07:00
Alistair Johnson
6750c8b743 Added other feature importances in python package (#1135)
* added new function to calculate other feature importances

* added capability to plot other feature importance measures

* changed plotting default to fscore

* added info on importance_type to boilerplate comment

* updated text of error statement

* added self module name to fix call

* added unit test for feature importances

* style fixes
2016-05-02 12:25:24 -05:00
sinhrks
9da2f3e613 DOC/TST: Fix Python sklearn dep 2016-05-01 17:27:43 +09:00
Faron
ad3f49e881 [py] eta decay bugfix 2016-04-30 15:51:57 +02:00
sinhrks
6bab164d80 Bug mixing DMatrix's with and without feature names 2016-04-30 14:42:57 +09:00
Faron
cf607e2448 [py] split value histograms 2016-04-28 20:26:21 +02:00
sinhrks
c55cc809e5 BUG: XGBClassifier.feature_importances_ raises ValueError if input is pandas DataFrame 2016-04-27 21:50:03 +09:00
sinhrks
8fc2456c87 Enable flake8 2016-04-24 17:32:31 +09:00
CodingCat
a31a978471 run native lib building command from maven 2016-03-16 16:47:08 -04:00
tqchen
ec2fb5bc48 Fix multi-class loading 2016-03-10 19:22:26 -08:00
tqchen
ced6d45e01 Update rabit 2016-03-02 20:53:34 -08:00
CodingCat
f8fff6c6fc rename files/packages 2016-03-01 23:48:35 -05:00
CodingCat
55e36893cd add style check for java and scala code 2016-03-01 20:53:50 -05:00
CodingCat
3b246c2420 re-structure Java API, add Scala API and consolidate the names of Java/Scala API 2016-03-01 20:53:41 -05:00
tqchen
ecb3a271be [PYTHON-DIST] Distributed xgboost python training API. 2016-02-29 16:54:13 -08:00
terrytangyuan
803a6fe474 Separate dependencies and lightweight test env for Python 2016-02-28 20:11:10 -06:00
tqchen
4a16b729fc [PYTHON] Simplify training logic, update rabit lib 2016-02-28 13:20:55 -08:00
tqchen
90bc7f8f6b [TEST] Fix travis test when reading hdfs 2016-02-27 18:15:32 -08:00
Tianqi Chen
758a77de9c Fix testcase after update and allow hdfs load 2016-02-26 17:04:51 -08:00
tqchen
80239aaf00 [TRAVIS] Fix script 2016-02-25 12:17:40 -08:00
ivallesp
ed5c98f0ee re-using the verbose-eval parameter in the cv and aggcv methods and tests adapted 2016-02-19 17:14:57 +01:00
Alexis Mignon
52e9085579 Merge branch 'master' of github.com:AlexisMignon/xgboost 2016-02-16 11:00:57 +01:00
Alexis Mignon
6e27d7539f - Added test cases for the use of custom objective functions
- Made the indentation more consistent with pep8
2016-02-16 10:59:25 +01:00
Faron
4b3a053913 stratified cv for python wrapper
finalize docstring
2016-02-15 16:06:17 +01:00
tqchen
1495a43cea [R] make all customizations to meet strict standard of cran 2016-01-16 10:25:12 -08:00
tqchen
634db18a0f [TRAVIS] cleanup travis script 2016-01-16 10:25:12 -08:00
FrozenFingerz
177259a0a7 unittest for cv bugfixes added 2015-12-29 14:13:40 +01:00