Commit Graph
605 Commits
Author SHA1 Message Date
Jiaming Yuan 317d7be6ee Always use partition based categorical splits. (#7857) 2022-05-03 22:30:32 +08:00
Rory Mitchell 90cce38236 Remove single_precision_histogram for gpu_hist (#7828) 2022-05-03 14:53:19 +02:00
Jiaming Yuan fdf533f2b9 [POC] Experimental support for l1 error. (#7812)
Support adaptive tree, a feature supported by both sklearn and lightgbm.  The tree leaf is recomputed based on residue of labels and predictions after construction.

For l1 error, the optimal value is the median (50 percentile).

This is marked as experimental support for the following reasons:
- The value is not well defined for distributed training, where we might have empty leaves for local workers. Right now I just use the original leaf value for computing the average with other workers, which might cause significant errors.
- Some follow-ups are required, for exact, pruner, and optimization for quantile function. Also, we need to calculate the initial estimation.
2022-04-26 21:41:55 +08:00
Bobby Wang bef1f939ce [doc] remove the doc about killing SparkContext [skip ci] (#7840) 2022-04-25 19:29:16 +08:00
Bobby Wang 6ece549a90 [doc] update the jvm tutorial to 1.6.1 [skip ci] (#7834) 2022-04-24 14:25:22 +08:00
forestkey c13a2a3114 [doc] "irrevelant" to "irrelevant" (#7832) 2022-04-22 16:54:30 +08:00
Jiaming Yuan 52d4eda786 Deprecate use_label_encoder in XGBClassifier. (#7822)
* Deprecate `use_label_encoder` in XGBClassifier.

* We have removed the encoder, now prepare to remove the indicator.
2022-04-21 13:14:02 +08:00
Bobby Wang 6f032b7152 [doc] fix a typo in jvm/index.rst (#7806) 2022-04-13 17:02:42 -07:00
Ikko Ashimine 56e4baff7c [doc] Fix typo in build.rst (#7800)
avaiable -> available
2022-04-13 16:45:26 +08:00
Bobby WangandSameer Raheja 4b00c64d96 [doc] improve xgboost4j-spark-gpu doc [skip ci] (#7793)
Co-authored-by: Sameer Raheja <sameerz@users.noreply.github.com>
2022-04-12 12:02:16 +08:00
Bobby WangandJiaming Yuan 89d6419fd5 [jvm-packages] add doc for xgboost4j-spark-gpu (#7779)
Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
2022-04-07 11:35:01 +08:00
Jiaming Yuan bcce17e688 Remove text loading in basic walk through demo. (#7753) 2022-04-01 00:59:42 +08:00
giuliohome c467e90ac1 [doc] Update doc for Kubernetes Operator (#7777) 2022-03-31 23:10:49 +08:00
Jiaming Yuan 522636cb52 Bump version. (#7769) 2022-03-31 06:33:22 +08:00
Jiaming Yuan a50b84244e Cleanup configuration for constraints. (#7758) 2022-03-29 04:22:46 +08:00
Jiaming Yuan 3c9b04460a Move num_parallel_tree to model parameter. (#7751)
The size of forest should be a property of model itself instead of a training
hyper-parameter.
2022-03-29 02:32:42 +08:00
Philip Hyunsu Cho 66cb4afc6c Update install doc (#7747) 2022-03-23 17:20:01 +08:00
Jiaming Yuan 4d81c741e9 External memory support for hist (#7531)
* Generate column matrix from gHistIndex.
* Avoid synchronization with the sparse page once the cache is written.
* Cleanups: Remove member variables/functions, change the update routine to look like approx and gpu_hist.
* Remove pruner.
2022-03-22 00:13:20 +08:00
Jiaming Yuan 98d6faefd6 Implement slope for Pseduo-Huber. (#7727)
* Add objective and metric.
* Some refactoring for CPU/GPU dispatching using linalg module.
2022-03-14 21:42:38 +08:00
Jiaming Yuan 18a4af63aa Update documents and tests. (#7659)
* Revise documents after recent refactoring and cat support.
* Add tests for behavior of max_depth and max_leaves.
2022-02-26 03:57:47 +08:00
Jiaming Yuan 83a66b4994 Support categorical data for hist. (#7695)
* Extract partitioner from hist.
* Implement categorical data support by passing the gradient index directly into the partitioner.
* Organize/update document.
* Remove code for negative hessian.
2022-02-25 03:47:14 +08:00
Jiaming Yuan 49c74a5369 Update R package description. (#7691)
* Change role.
* Remove cmake file when building the package.
2022-02-23 08:36:37 +08:00
Jiaming Yuan 584bae1fc6 Fix document build with scikit-learn (#7684)
* Require sphinx >= 4.4 for RTD.

* Install sklearn.
2022-02-22 08:58:54 +08:00
Jiaming Yuan 14d61b0141 [doc] Update document for building from source. (#7664)
- Mention standard install command for R package.
- Remove repeated "get source" step.
- Remove troubleshooting on Windows.  It's outdated considering VS 2022 is already out.
2022-02-19 04:57:03 +08:00
Jiaming Yuan 12949c6b31 [R] Implement feature weights. (#7660) 2022-02-16 22:20:52 +08:00
Jiaming Yuan 93eebe8664 [doc] Fix broken link. [skip ci] (#7655) 2022-02-15 14:07:34 +08:00
Jiaming Yuan 0da7d872ef [doc] Update for prediction. (#7648) 2022-02-15 05:01:55 +08:00
Jiaming Yuan 0d0abe1845 Support optimal partitioning for GPU hist. (#7652)
* Implement `MaxCategory` in quantile.
* Implement partition-based split for GPU evaluation.  Currently, it's based on the existing evaluation function.
* Extract an evaluator from GPU Hist to store the needed states.
* Added some CUDA stream/event utilities.
* Update document with references.
* Fixed a bug in approx evaluator where the number of data points is less than the number of categories.
2022-02-15 03:03:12 +08:00
Jiaming Yuan 5cd1f71b51 [dask] Improve configuration for port. (#7645)
- Try port 0 to let the OS return the available port.
- Add port configuration.
2022-02-14 21:34:34 +08:00
Philip Hyunsu Cho f6e6d0b2c0 [CI] Build Python wheels for MacOS (x86_64 and arm64) (#7621)
* Build Python wheels for OSX (x86_64 and arm64)

* Use Conda's libomp when running Python tests

* fix

* Add comment to explain CIBW_TARGET_OSX_ARM64

* Update release script

* Add comments in build_python_wheels.sh

* Document wheel pipeline
2022-02-02 17:35:48 -08:00
Philip Hyunsu Cho 271a7c5d43 [Doc] fix typo in install doc (#7623) 2022-01-31 13:35:56 -08:00
Philip Hyunsu Cho f21301c749 [Doc] Add instruction to install XGBoost for Apple Silicon using Conda (#7612) 2022-01-28 01:06:39 -08:00
Jiaming Yuan ef4dae4c0e [dask] Add scheduler address to dask config. (#7581)
- Add user configuration.
- Bring back to the logic of using scheduler address from dask.  This was removed when we were trying to support GKE, now we bring it back and let xgboost try it if direct guess or host IP from user config failed.
2022-01-22 01:56:32 +08:00
Jiaming Yuan b4ec1682c6 Update document for multi output and categorical. (#7574)
* Group together categorical related parameters.
* Update documents about multioutput and categorical.
2022-01-19 04:35:17 +08:00
Jiaming Yuan dac9eb13bd Implement new save_raw in Python. (#7572)
* Expose the new C API function to Python.
* Remove old document and helper script.
* Small optimization to the `save_raw` and Json ctors.
2022-01-19 02:27:51 +08:00
Jiaming Yuan deab0e32ba Validate out of range categorical value. (#7576)
* Use float in CPU categorical set to preserve the input value.
* Check out of range values.
2022-01-18 20:16:19 +08:00
Jiaming Yuan a1bcd33a3b [breaking] Change internal model serialization to UBJSON. (#7556)
* Use typed array for models.
* Change the memory snapshot format.
* Add new C API for saving to raw format.
2022-01-16 02:11:53 +08:00
Jiaming Yuan e5e47c3c99 Clarify the behavior of invalid categorical value handling. (#7529) 2022-01-13 16:11:52 +08:00
Jiaming Yuan 001503186c Rewrite approx (#7214)
This PR rewrites the approx tree method to use codebase from hist for better performance and code sharing.

The rewrite has many benefits:
- Support for both `max_leaves` and `max_depth`.
- Support for `grow_policy`.
- Support for mono constraint.
- Support for feature weights.
- Support for easier bin configuration (`max_bin`).
- Support for categorical data.
- Faster performance for most of the datasets. (many times faster)
- Support for prediction cache.
- Significantly better performance for external memory.
- Unites the code base between approx and hist.
2022-01-10 21:15:05 +08:00
Jiaming Yuan ec56d5869b [doc] Include dask examples into doc. (#7530) 2022-01-05 03:27:22 +08:00
Jiaming Yuan 54582f641a [doc] Use cross references in sphinx doc. (#7522)
* Use cross references instead of URL.
* Fix auto doc for callback.
2022-01-05 03:21:25 +08:00
Jiaming Yuan 8f0a42a266 Initial support for multi-label classification. (#7521)
* Add support in sklearn classifier.
2022-01-04 23:58:21 +08:00
Randall Britten a4a0ebb85d [doc] Lowercase omega for per tree complexity (#7532)
As suggested on issue #7480
2021-12-29 23:05:54 +08:00
Jiaming Yuan a512b4b394 [doc] Promote dask from experimental. [skip ci] (#7509) 2021-12-16 14:17:06 +08:00
Harvey 1864fab592 Minor edits to Parameters doc page. (#7500)
* bost -> both

* doc improvement

* use original filename

* syntax highlight false

* missed a few highlights
2021-12-07 15:46:44 +08:00
danmarinescu 6f38f5affa Updated CMake version requirement in build.rst (#7487)
The documentation states that to build from source you need CMake 3.13 or higher. However, according to https://github.com/dmlc/xgboost/blob/master/CMakeLists.txt#L1 CMake 3.14 or higher is required.
2021-11-27 09:58:01 +08:00
Jiaming Yuan c024c42dce Modernize XGBoost Python document. (#7468)
* Use sphinx gallery to integrate examples.
* Remove mock objects.
* Add dask doc inventory.
2021-11-23 23:24:52 +08:00
Jiaming Yuan d33854af1b [Breaking] Accept multi-dim meta info. (#7405)
This PR changes base_margin into a 3-dim array, with one of them being reserved for multi-target classification. Also, a breaking change is made for binary serialization due to extra dimension along with a fix for saving the feature weights. Lastly, it unifies the prediction initialization between CPU and GPU. After this PR, the meta info setter in Python will be based on array interface.
2021-11-18 23:02:54 +08:00
Philip Hyunsu Cho 2adf222fb2 [CI] CI cost saving (#7407)
* [CI] Drop CUDA 10.1; Require 11.0

* Change NCCL version

* Use CUDA 10.1 for clang-tidy, for now

* Remove JDK 11 and 12

* Fix NCCL version

* Don't require 11.0 just yet, until clang-tidy is fixed

* Skip MultiClassesSerializationTest.GpuHist
2021-11-17 21:02:20 -08:00
Jiaming Yuan 97d7582457 Delay breaking changes to 1.6. (#7420)
The patch is too big to be backported.
2021-11-12 16:46:03 +08:00