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1238 Commits

Author SHA1 Message Date
Bobby Wang
72ec0c5484
[pyspark] support pred_contribs (#8633) 2023-01-11 16:51:12 +08:00
Jiaming Yuan
cfa994d57f
Multi-target support for L1 error. (#8652) 
- Add matrix support to the median function.
- Iterate through each target for quantile computation.
 2023-01-11 05:51:14 +08:00
Jiaming Yuan
badeff1d74
Init estimation for regression. (#8272) 2023-01-11 02:04:56 +08:00
Jiaming Yuan
1b58d81315
[doc] Document Python inputs. (#8643) 2023-01-10 15:39:32 +08:00
Bobby Wang
4e12f3e1bc
[Breaking][jvm-packages] Bump rapids version to 22.12.0 (#8648) 
* [jvm-packages] Bump rapids version to 22.12.0

This PR bumps spark version to 3.1.1 and the rapids version
to 22.12.0, which results in the latest xgboost can't run
with the old rapids packages.
 2023-01-07 18:59:17 +08:00
Jiaming Yuan
e68a152d9e
Do not return internal value for get_params. (#8634) 2023-01-05 17:48:26 +08:00
Jiaming Yuan
d308124910
Refactor PySpark tests. (#8605) 
- Convert classifier tests to pytest tests.
- Replace hardcoded tests.
 2023-01-04 17:05:16 +08:00
Jiaming Yuan
6eaddaa9c3
[CI] Fix CI with updated dependencies. (#8631) 
* [CI] Fix CI with updated dependencies.

- Fix jvm package get iris.

* Skip SHAP test for now.

* Revert "Skip SHAP test for now."

This reverts commit 9aa28b4d8aee53fa95d92d2a879c6783ff4b2faa.

* Catch all exceptions.
 2023-01-03 21:04:04 -08:00
Jiaming Yuan
8d545ab2a2
Implement fit stump. (#8607) 2023-01-04 04:14:51 +08:00
James Lamb
9a98c3726c
[R] [CI] add more linting checks (#8624) 2022-12-29 18:20:36 +08:00
James Lamb
b05abfc494
[CI] remove unused cpp test helper function (#8625) 2022-12-28 02:47:52 +08:00
Rong Ou
3ceeb8c61c
Add data split mode to DMatrix MetaInfo (#8568) 2022-12-25 20:37:37 +08:00
Rong Ou
77b069c25d
Support bitwise allreduce operations in the communicator (#8623) 2022-12-25 06:40:05 +08:00
James Lamb
c7e82b5914
[R] enforce lintr checks (fixes #8012) (#8613) 2022-12-25 05:02:56 +08:00
Philip Hyunsu Cho
5bf9e79413
[CI] Disable gtest with RMM (#8620) 2022-12-21 01:41:34 -08:00
Jiaming Yuan
c6a8754c62
Define CUDA Context. (#8604) 
We will transition to non-default and non-blocking CUDA stream.
 2022-12-20 15:15:07 +08:00
Jiaming Yuan
f6effa1734
Support Series and Python primitives in inplace_predict and QDM (#8547) 2022-12-17 00:15:15 +08:00
Jiaming Yuan
38887a1876
Fix windows build on buildkite. (#8602) 2022-12-16 21:12:24 +08:00
Jiaming Yuan
43a647a4dd
Fix inference with categorical feature. (#8591) 2022-12-15 17:57:26 +08:00
James Lamb
7a07dcf651
[R] resolve line_length_linter warnings (#8565) 
Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2022-12-14 21:04:24 +08:00
Jiaming Yuan
40343c8ee1
Test dask demos. (#8557) 
Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2022-12-13 18:37:31 +08:00
Philip Hyunsu Cho
35d8447282
[CI] Use conda-forge channel in conda (#8583) 2022-12-11 23:25:29 -08:00
Rong Ou
42e6fbb0db
Fix sklearn test that calls a removed field (#8579) 2022-12-09 13:06:44 -08:00
Jiaming Yuan
deb3edf562
Support list and tuple for QDM. (#8542) 2022-12-10 01:14:44 +08:00
Jiaming Yuan
8824b40961
Update date in release script. [skip ci] (#8574) 2022-12-09 23:16:10 +08:00
James Lamb
ffee35e0f0
[R] [ci] remove dependency on {devtools} (#8563) 2022-12-09 01:21:28 +08:00
Jiaming Yuan
3e26107a9c
Rename and extract Context. (#8528) 
* Rename `GenericParameter` to `Context`.
* Rename header file to reflect the change.
* Rename all references.
 2022-12-07 04:58:54 +08:00
James Lamb
05fc6f3ca9
[R] [ci] move linting code out of package (#8545) 2022-12-07 03:18:17 +08:00
Jiaming Yuan
d99bdd1b1e
[CI] Fix github action mismatched glibcxx. (#8551) 
* [CI] Fix github action mismatched glibcxx.

Split up the Linux test to use the toolchain from conda forge.
 2022-12-06 17:42:15 +08:00
Jiaming Yuan
e143a4dd7e
[pyspark] Refactor local tests. (#8525) 
- Use pytest fixture for spark session.
- Replace hardcoded results.
 2022-12-05 23:49:54 +08:00
Jiaming Yuan
e3bf5565ab
Extract transform iterator. (#8498) 2022-12-05 21:37:07 +08:00
Rong Ou
78d65a1928
Initial support for column-wise data split (#8468) 2022-12-04 01:37:51 +08:00
Bobby Wang
8e41ad24f5
[pyspark] sort qid for SparkRanker (#8497) 
* [pyspark] sort qid for SparkRandker

* resolve comments
 2022-12-01 16:40:35 -08:00
Rong Ou
a8255ea678
Add an in-memory collective communicator (#8494) 2022-12-01 00:24:12 +08:00
Jiaming Yuan
157e98edf7
Support half type from cupy. (#8487) 2022-11-30 17:56:42 +08:00
Jiaming Yuan
addaa63732
Support null value in CUDA array interface. (#8486) 
* Support null value in CUDA array interface.

- Fix for potential null value in array interface.
- Fix incorrect check on mask stride.

* Simple tests.

* Extract mask.
 2022-11-28 17:48:25 -08:00
Jiaming Yuan
d666ba775e
Support all pandas nullable integer types. (#8480) 
- Enumerate all pandas integer types.
- Tests for `None`, `nan`, and `pd.NA`
 2022-11-28 22:38:16 +08:00
Jiaming Yuan
f2209c1fe4
Don't shuffle columns in categorical tests. (#8446) 2022-11-28 20:28:06 +08:00
Jiaming Yuan
8f97c92541
Support half type for pandas. (#8481) 2022-11-24 12:47:40 +08:00
Jiaming Yuan
e07245f110
Take datatable as row major input. (#8472) 
* Take datatable as row major input.

Try to avoid a transform with dense table.
 2022-11-24 09:20:13 +08:00
Jiaming Yuan
284dcf8d22
Add script for change version. (#8443) 
- Replace jvm regex replacement script with mvn command.
- Replace cmake script for python version with python script.
- Automate rest of the manual steps.

The script can handle dev branch, rc release, and formal release version.
 2022-11-24 00:06:39 +08:00
Jiaming Yuan
5f1a6fca0d
[R] Use new interface for creating DMatrix from CSR. (#8455) 
* [R] Use new interface for creating DMatrix from CSR.

- CSC is still using the old API.

The old API is not aware of `nthread` parameter, which makes DMatrix to use all available
thread during construction and during transformation lie `SparsePage` -> `CSCPage`.
 2022-11-23 21:36:43 +08:00
Bobby Wang
2dde65f807
[ci] reduce pyspark test time (#8324) 2022-11-21 16:58:00 +08:00
Jiaming Yuan
0252d504d8
Fix R package build on CI. (#8445) 
Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2022-11-09 12:18:36 +08:00
Jiaming Yuan
a83748eb45
[CI] Revise R tests. (#8430) 
- Use the standard package check (check on the tarball instead of the source tree).
- Run commands in parallel.
- Cleanup dependencies installation.
- Replace makefile.
- Documentation.
- Test using the image from rhub.
 2022-11-09 09:12:13 +08:00
Rong Ou
8e76f5f595
Use DataSplitMode to configure data loading (#8434) 
* Use `DataSplitMode` to configure data loading
 2022-11-08 16:21:50 +08:00
Jiaming Yuan
0d3da9869c
Require isort on all Python files. (#8420) 2022-11-08 12:59:06 +08:00
Rong Ou
99fa8dad2d
Add back xgboost.rabit for backwards compatibility (#8408) 
* Add back xgboost.rabit for backwards compatibility

* fix my errors

* Fix lint

* Use FutureWarning

Co-authored-by: Hyunsu Philip Cho <chohyu01@cs.washington.edu>
 2022-11-01 21:47:41 -07:00
Jiaming Yuan
2ed3c29c8a
[CI] Cleanup github action tests. (#8397) 
- Merge doxygen build with sphinx.
- Use mamba on non-windows Github Action.
 2022-10-29 06:04:27 +08:00
Jiaming Yuan
a408c34558
Update JSON parser demo with categorical feature. (#8401) 
- Parse categorical features in the Python example.
- Add tests.
- Update document.
 2022-10-28 20:57:43 +08:00