748 Commits

Author SHA1 Message Date
Hyunsu Cho
4bc59ef7c3 Release 1.7 2022-10-31 10:53:07 -07:00
Jiaming Yuan
e43cd60c0e
[backport] Type fix for WebAssembly. (#8369) (#8394)
Co-authored-by: Yizhi Liu <liuyizhi@apache.org>
2022-10-26 20:47:16 +08:00
Jiaming Yuan
7cf58a2c65
Make 1.7.0rc1. (#8365) 2022-10-20 12:01:18 +08:00
Jiaming Yuan
c884b9e888
Validate features for inplace predict. (#8359) 2022-10-19 23:05:36 +08:00
luca-s
c47c71e34f
XGBRanker documentation: few clarifications (#8356) 2022-10-19 01:54:14 +08:00
Bobby Wang
76f95a6667
[pyspark] Filter out the unsupported train parameters (#8355) 2022-10-18 23:26:02 +08:00
Jiaming Yuan
3901f5d9db
[pyspark] Cleanup data processing. (#8344)
* Enable additional combinations of ctor parameters.
* Unify procedures for QuantileDMatrix and DMatrix.
2022-10-18 14:56:23 +08:00
luca-s
5647fc6542
XGBRanker documentation: missing default objective (#8347) 2022-10-18 10:43:29 +08:00
Rong Ou
8f3dee58be
Speed up tests with federated learning enabled (#8350)
* Speed up tests with federated learning enabled

* Re-enable timeouts

Co-authored-by: Hyunsu Philip Cho <chohyu01@cs.washington.edu>
2022-10-17 15:17:04 -07:00
Jiaming Yuan
2176e511fc
Disable pytest-timeout for now. (#8348) 2022-10-17 23:06:10 +08:00
Jiaming Yuan
fcddbc9264
FIx incorrect function name. (#8346) 2022-10-17 19:28:20 +08:00
Rong Ou
80e10e02ab
Avoid blank lines with federated training (#8342) 2022-10-14 14:55:01 +08:00
Jiaming Yuan
97a5b088a5
[pyspark] Use quantile dmatrix. (#8284) 2022-10-12 20:38:53 +08:00
Jiaming Yuan
c68684ff4c
Update parameter for categorical feature. (#8285) 2022-10-10 19:48:29 +08:00
Jiaming Yuan
5545c49cfc
Require keyword args for data iterator. (#8327) 2022-10-10 17:47:13 +08:00
Rong Ou
668b8a0ea4
[Breaking] Switch from rabit to the collective communicator (#8257)
* Switch from rabit to the collective communicator

* fix size_t specialization

* really fix size_t

* try again

* add include

* more include

* fix lint errors

* remove rabit includes

* fix pylint error

* return dict from communicator context

* fix communicator shutdown

* fix dask test

* reset communicator mocklist

* fix distributed tests

* do not save device communicator

* fix jvm gpu tests

* add python test for federated communicator

* Update gputreeshap submodule

Co-authored-by: Hyunsu Philip Cho <chohyu01@cs.washington.edu>
2022-10-05 14:39:01 -08:00
Jiaming Yuan
e47b3a3da3
Upgrade mypy. (#8302)
Some breaking changes were made in mypy.
2022-10-05 14:31:59 +08:00
Jiaming Yuan
97c3a80a34
Add C document to sphinx, fix arrow. (#8300)
- Group C API.
- Add C API sphinx doc.
- Consistent use of `OptionalArg` and the parameter name `config`.
- Remove call to deprecated functions in demo.
- Fix some formatting errors.
- Add links to c examples in the document (only visible with doxygen pages)
- Fix arrow.
2022-10-05 09:52:15 +08:00
Jiaming Yuan
55cf24cc32
Obtain CSR matrix from DMatrix. (#8269) 2022-09-29 20:41:43 +08:00
Bobby Wang
c91fed083d
[pyspark] disable repartition_random_shuffle by default (#8283) 2022-09-29 10:50:51 +08:00
Jiaming Yuan
6925b222e0
Fix mixed types with cuDF. (#8280) 2022-09-29 00:57:52 +08:00
Jiaming Yuan
f835368bcf
Mark next release as 1.7 instead of 2.0 (#8281) 2022-09-28 14:33:37 +08:00
Jiaming Yuan
fcab51aa82
Support more pandas nullable types (#8262)
- Float32/64
- Category.
2022-09-27 01:59:50 +08:00
WeichenXu
ff71c69adf
[pyspark] Add validation for param 'early_stopping_rounds' and 'validation_indicator_col' (#8250)
Signed-off-by: Weichen Xu <weichen.xu@databricks.com>
2022-09-26 17:43:03 +08:00
WeichenXu
ab342af242
[pyspark] Fix xgboost spark estimator dataset repartition issues (#8231) 2022-09-22 21:31:41 +08:00
Jiaming Yuan
b791446623
Initial support for IPv6 (#8225)
- Merge rabit socket into XGBoost.
- Dask interface support.
- Add test to the socket.
2022-09-21 18:06:50 +08:00
Bobby Wang
4f42aa5f12
[pyspark] make the model saved by pyspark compatible (#8219)
Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
2022-09-20 16:43:49 +08:00
Bobby Wang
520586ffa7
[pyspark] fix empty data issue when constructing DMatrix (#8245)
Co-authored-by: Hyunsu Philip Cho <chohyu01@cs.washington.edu>
2022-09-20 16:43:20 +08:00
Jiaming Yuan
bdf265076d
Make QuantileDMatrix default to sklearn esitmators. (#8220) 2022-09-13 13:52:19 +08:00
Rong Ou
a2686543a9
Common interface for collective communication (#8057)
* implement broadcast for federated communicator

* implement allreduce

* add communicator factory

* add device adapter

* add device communicator to factory

* add rabit communicator

* add rabit communicator to the factory

* add nccl device communicator

* add synchronize to device communicator

* add back print and getprocessorname

* add python wrapper and c api

* clean up types

* fix non-gpu build

* try to fix ci

* fix std::size_t

* portable string compare ignore case

* c style size_t

* fix lint errors

* cross platform setenv

* fix memory leak

* fix lint errors

* address review feedback

* add python test for rabit communicator

* fix failing gtest

* use json to configure communicators

* fix lint error

* get rid of factories

* fix cpu build

* fix include

* fix python import

* don't export collective.py yet

* skip collective communicator pytest on windows

* add review feedback

* update documentation

* remove mpi communicator type

* fix tests

* shutdown the communicator separately

Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
2022-09-12 15:21:12 -07:00
Bobby Wang
7ee10e3dbd
[pyspark] Cleanup the comments (#8217) 2022-09-05 16:20:12 +08:00
Jiaming Yuan
ada4a86d1c
Fix dask interface with latest cupy. (#8210) 2022-09-03 03:10:43 +08:00
Rong Ou
b78bc734d9
Fix dask.py lint error (#8216) 2022-09-02 16:30:01 +08:00
WeichenXu
651f0a8889
[pyspark] Fixing xgboost.spark python doc (#8200)
Signed-off-by: Weichen Xu <weichen.xu@databricks.com>
2022-08-25 14:41:48 +08:00
WeichenXu
d03794ce7a
[pyspark] Add param validation for "objective" and "eval_metric" param, and remove invalid booster params (#8173)
Signed-off-by: Weichen Xu <weichen.xu@databricks.com>
2022-08-24 15:29:43 +08:00
Jiaming Yuan
9b32e6e2dc
Fix release script. (#8187) (#8195) 2022-08-23 15:08:30 +08:00
WeichenXu
f4628c22a4
[pyspark] Implement SparkXGBRanker estimator (#8172)
Signed-off-by: Weichen Xu <weichen.xu@databricks.com>
2022-08-23 02:35:19 +08:00
Rong Ou
ad3bc0edee
Allow insecure gRPC connections for federated learning (#8181)
* Allow insecure gRPC connections for federated learning

* format
2022-08-19 12:16:14 +08:00
WeichenXu
53d2a733b0
[pyspark] Make Xgboost estimator support using sparse matrix as optimization (#8145)
Signed-off-by: Weichen Xu <weichen.xu@databricks.com>
2022-08-19 01:57:28 +08:00
Gavin Zhang
40a10c217d
Use make on i system (#8178)
Co-authored-by: GavinZhang <zhanggan@cn.ibm.com>
2022-08-18 12:55:32 +08:00
Jiaming Yuan
36e7c5364d
[dask] Deterministic rank assignment. (#8018) 2022-08-11 19:17:58 +08:00
Jiaming Yuan
570f8ae4ba
Use black on more Python files. (#8137) 2022-08-11 01:38:11 +08:00
Jiaming Yuan
bdb291f1c2
[doc] Clarification for feature importance. (#8151) 2022-08-11 00:30:42 +08:00
Jiaming Yuan
9ae547f994
Use config_context in sklearn interface. (#8141) 2022-08-09 14:48:54 +08:00
Bobby Wang
03cc3b359c
[pyspark] support a list of feature column names (#8117) 2022-08-08 17:05:27 +08:00
Jiaming Yuan
d87f69215e
Quantile DMatrix for CPU. (#8130)
- Add a new `QuantileDMatrix` that works for both CPU and GPU.
- Deprecate `DeviceQuantileDMatrix`.
2022-08-02 15:51:23 +08:00
Jiaming Yuan
2cba1d9fcc
Fix compatibility with latest cupy. (#8129)
* Fix compatibility with latest cupy.

* Freeze mypy.
2022-08-01 15:24:42 +08:00
Jiaming Yuan
546de5efd2
[pyspark] Cleanup data processing. (#8088)
- Use numpy stack for handling list of arrays.
- Reuse concat function from dask.
- Prepare for `QuantileDMatrix`.
- Remove unused code.
- Use iterator for prediction to avoid initializing xgboost model
2022-07-26 15:00:52 +08:00
Jiaming Yuan
8bdea72688
[Python] Require black and isort for new Python files. (#8096)
* [Python] Require black and isort for new Python files.

- Require black and isort for spark and dask module.

These files are relatively new and are more conform to the black formatter. We will
convert the rest of the library as we move forward.

Other libraries including dask/distributed and optuna use the same formatting style and
have a more strict standard. The black formatter is indeed quite nice, automating it can
help us unify the code style.

- Gather Python checks into a single script.
2022-07-20 10:25:24 +08:00
WeichenXu
f23cc92130
[pyspark] User guide doc and tutorials (#8082)
Co-authored-by: Bobby Wang <wbo4958@gmail.com>
2022-07-19 22:25:14 +08:00