Commit Graph

6353 Commits

Author SHA1 Message Date
Jiaming Yuan
3913ff470f Import data lazily during tests. (#9176) 2023-05-23 03:58:31 +08:00
Bobby Wang
6274fba0a5 [pyspark] support tying (#9172) 2023-05-19 14:39:26 +08:00
Bobby Wang
caf326d508 [pyspark] Refactor and typing support for models (#9156) 2023-05-17 16:38:51 +08:00
Bobby Wang
cb370c4f7d [jvm] separate spark.version for cpu and gpu (#9166) 2023-05-17 07:12:20 +08:00
Stephan T. Lavavej
7375bd058b Fix IndexTransformIter. (#9155) 2023-05-12 21:25:54 +08:00
Stephan T. Lavavej
59edfdb315 Fix typo: _defined => defined (#9153) 2023-05-11 16:34:45 -07:00
Stephan T. Lavavej
779b82c098 Avoid redefining macros. (#9154) 2023-05-11 15:59:25 -07:00
Rong Ou
603f8ce2fa Support hist in the partition builder under column split (#9120) 2023-05-11 05:24:29 +08:00
Rong Ou
52311dcec9 Fix multi-threaded gtests (#9148) 2023-05-10 19:15:32 +08:00
Jiaming Yuan
e4129ed6ee [jvm-packages] Remove akka in tester. (#9149) 2023-05-10 14:10:58 +08:00
dependabot[bot]
2ab6660943 Bump maven-surefire-plugin in /jvm-packages/xgboost4j-spark (#9131)
Bumps [maven-surefire-plugin](https://github.com/apache/maven-surefire) from 3.0.0 to 3.1.0.
- [Release notes](https://github.com/apache/maven-surefire/releases)
- [Commits](https://github.com/apache/maven-surefire/compare/surefire-3.0.0...surefire-3.1.0)

---
updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-surefire-plugin
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-05-10 12:21:36 +08:00
dependabot[bot]
d21e7e5f82 Bump maven-gpg-plugin from 3.0.1 to 3.1.0 in /jvm-packages (#9136)
Bumps [maven-gpg-plugin](https://github.com/apache/maven-gpg-plugin) from 3.0.1 to 3.1.0.
- [Commits](https://github.com/apache/maven-gpg-plugin/compare/maven-gpg-plugin-3.0.1...maven-gpg-plugin-3.1.0)

---
updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-gpg-plugin
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-05-10 10:21:36 +08:00
Philip Hyunsu Cho
0cd4382d72 Fix config-settings handling in pip install (#9115)
* Fix config_settings handling in pip install

* Fix formatting

* Fix flag use_system_libxgboost

* Add setuptools to doc requirements.txt

* Fix mypy
2023-05-09 17:54:20 -07:00
Jiaming Yuan
09b44915e7 [doc] Replace recommonmark with myst-parser. (#9125) 2023-05-10 08:11:36 +08:00
Jiaming Yuan
85988a3178 Wait for data CUDA stream instead of sync. (#9144)
---------

Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
2023-05-09 09:52:21 +08:00
Uriya Harpeness
a075aa24ba Move python tool configurations to pyproject.toml, and add the python 3.11 classifier. (#9112) 2023-05-06 02:59:06 +08:00
Jiaming Yuan
55968ed3fa Fix monotone constraints on CPU. (#9122) 2023-05-06 01:07:54 +08:00
Rong Ou
250b22dd22 Fix nvflare horizontal demo (#9124) 2023-05-05 16:48:22 +08:00
Jiaming Yuan
47b3cb6fb7 Remove unused parameters in RABIT. (#9108) 2023-05-05 05:26:24 +08:00
Philip Hyunsu Cho
07b2d5a26d Add useful links to pyproject.toml (#9114) 2023-05-02 12:47:15 -07:00
Jiaming Yuan
08ce495b5d Use Booster context in DMatrix. (#8896)
- Pass context from booster to DMatrix.
- Use context instead of integer for `n_threads`.
- Check the consistency configuration for `max_bin`.
- Test for all combinations of initialization options.
2023-04-28 21:47:14 +08:00
Jiaming Yuan
1f9a57d17b [Breaking] Require format to be specified in input URI. (#9077)
Previously, we use `libsvm` as default when format is not specified. However, the dmlc
data parser is not particularly robust against errors, and the most common type of error
is undefined format.

Along with which, we will recommend users to use other data loader instead. We will
continue the maintenance of the parsers as it's currently used for many internal tests
including federated learning.
2023-04-28 19:45:15 +08:00
Bobby Wang
e922004329 [doc] fix the cudf installation [skip ci] (#9106) 2023-04-28 19:43:58 +08:00
Jiaming Yuan
17ff471616 Optimize array interface input. (#9090) 2023-04-28 18:01:58 +08:00
Rong Ou
fb941262b4 Add demo for vertical federated learning (#9103) 2023-04-28 16:03:21 +08:00
Jiaming Yuan
e206b899ef Rework MAP and Pairwise for LTR. (#9075) 2023-04-28 02:39:12 +08:00
Jiaming Yuan
0e470ef606 Optimize prediction with QuantileDMatrix. (#9096)
- Reduce overhead in `FVecDrop`.
- Reduce overhead caused by `HostVector()` calls.
2023-04-28 00:51:41 +08:00
Jiaming Yuan
fa267ad093 [CI] Freeze R version to 4.2.0 with MSVC. (#9104) 2023-04-27 22:48:31 +08:00
Jiaming Yuan
96d3f8a6f3 [doc] Update document. (#9098)
- Mention flink is still under construction.
- Update doxygen version.
- Fix warnings from doxygen about defgroup title and mismatched parameter name.
2023-04-27 19:29:03 +08:00
Rong Ou
511d4996b5 Rely on gRPC to generate random port (#9102) 2023-04-27 09:48:26 +08:00
Jiaming Yuan
101a2e643d [jvm-packages] Bump rapids version. (#9097) 2023-04-27 09:46:46 +08:00
Scott Gustafson
353ed5339d Convert `DaskXGBClassifier.classes_` to an array (#8452)
---------

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
2023-04-27 02:23:35 +08:00
Boris
0e7377ba9c Updated flink 1.8 -> 1.17. Added smoke tests for Flink (#9046) 2023-04-26 18:41:11 +08:00
Rong Ou
a320b402a5 More refactoring to take advantage of collective aggregators (#9081) 2023-04-26 03:36:09 +08:00
dependabot[bot]
49ccae7fb9 Bump spark.version from 3.1.1 to 3.4.0 in /jvm-packages (#9039)
Bumps `spark.version` from 3.1.1 to 3.4.0.

Updates `spark-mllib_2.12` from 3.1.1 to 3.4.0

Updates `spark-core_2.12` from 3.1.1 to 3.4.0

Updates `spark-sql_2.12` from 3.1.1 to 3.4.0

---
updated-dependencies:
- dependency-name: org.apache.spark:spark-mllib_2.12
  dependency-type: direct:production
  update-type: version-update:semver-minor
- dependency-name: org.apache.spark:spark-core_2.12
  dependency-type: direct:production
  update-type: version-update:semver-minor
- dependency-name: org.apache.spark:spark-sql_2.12
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-04-26 01:32:06 +08:00
Bobby Wang
17add4776f [pyspark] Don't stack for non feature columns (#9088) 2023-04-25 23:09:12 +08:00
dependabot[bot]
a2cc78c1fb Bump scala.version from 2.12.8 to 2.12.17 in /jvm-packages (#9083)
Bumps `scala.version` from 2.12.8 to 2.12.17.

Updates `scala-compiler` from 2.12.8 to 2.12.17
- [Release notes](https://github.com/scala/scala/releases)
- [Commits](https://github.com/scala/scala/compare/v2.12.8...v2.12.17)

Updates `scala-library` from 2.12.8 to 2.12.17
- [Release notes](https://github.com/scala/scala/releases)
- [Commits](https://github.com/scala/scala/compare/v2.12.8...v2.12.17)

---
updated-dependencies:
- dependency-name: org.scala-lang:scala-compiler
  dependency-type: direct:production
  update-type: version-update:semver-patch
- dependency-name: org.scala-lang:scala-library
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-04-25 21:30:38 +08:00
Bobby Wang
339f21e1bf [pyspark] fix a type hint with old pyspark release (#9079) 2023-04-24 20:04:14 +08:00
Bobby Wang
d237378452 [jvm-packages] Clean up the dependencies after removing scala versioned tracker (#9078) 2023-04-24 17:49:08 +08:00
Jiaming Yuan
c512c3f46b [jvm-packages] Bump rapids version. (#9056) 2023-04-22 15:46:44 +08:00
Rong Ou
8dbe0510de More collective aggregators (#9060) 2023-04-22 03:32:05 +08:00
Jiaming Yuan
7032981350 Fix timer annotation. (#9057) 2023-04-21 22:53:58 +08:00
austinzh
3b742dc4f1 Stop using Rabit in predition (#9054) 2023-04-21 19:38:07 +08:00
dependabot[bot]
39b0fde0e7 Bump kryo from 5.4.0 to 5.5.0 in /jvm-packages (#9070)
Bumps [kryo](https://github.com/EsotericSoftware/kryo) from 5.4.0 to 5.5.0.
- [Release notes](https://github.com/EsotericSoftware/kryo/releases)
- [Commits](https://github.com/EsotericSoftware/kryo/compare/kryo-parent-5.4.0...kryo-parent-5.5.0)

---
updated-dependencies:
- dependency-name: com.esotericsoftware:kryo
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-04-21 18:16:34 +08:00
dependabot[bot]
ee84e22c8d Bump maven-checkstyle-plugin from 3.2.1 to 3.2.2 in /jvm-packages (#9073)
Bumps [maven-checkstyle-plugin](https://github.com/apache/maven-checkstyle-plugin) from 3.2.1 to 3.2.2.
- [Release notes](https://github.com/apache/maven-checkstyle-plugin/releases)
- [Commits](https://github.com/apache/maven-checkstyle-plugin/compare/maven-checkstyle-plugin-3.2.1...maven-checkstyle-plugin-3.2.2)

---
updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-checkstyle-plugin
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-04-21 18:16:08 +08:00
Jiaming Yuan
b908680bec Fix race condition in cpp metric tests. (#9058) 2023-04-21 05:24:10 +08:00
Philip Hyunsu Cho
a5cd2412de Replace setup.py with pyproject.toml (#9021)
* Create pyproject.toml
* Implement a custom build backend (see below) in packager directory. Build logic from setup.py has been refactored and migrated into the new backend.
* Tested: pip wheel . (build wheel), python -m build --sdist . (source distribution)
2023-04-20 13:51:39 -07:00
Jiaming Yuan
a7b3dd3176 Fix compiler warnings. (#9055) 2023-04-21 02:26:47 +08:00
dependabot[bot]
2acd78b44b Bump maven-project-info-reports-plugin in /jvm-packages/xgboost4j (#9049)
Bumps [maven-project-info-reports-plugin](https://github.com/apache/maven-project-info-reports-plugin) from 3.4.2 to 3.4.3.
- [Release notes](https://github.com/apache/maven-project-info-reports-plugin/releases)
- [Commits](https://github.com/apache/maven-project-info-reports-plugin/compare/maven-project-info-reports-plugin-3.4.2...maven-project-info-reports-plugin-3.4.3)

---
updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-project-info-reports-plugin
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-04-21 00:10:45 +08:00
Emil Ejbyfeldt
a84a1fde02 [jvm-packages] Update scalatest to 3.2.15 (#8925)
---------

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
2023-04-20 22:16:56 +08:00