This commit is contained in:
tqchen 2014-11-23 14:08:34 -08:00
parent 5f08313cb2
commit 373620503a
4 changed files with 55 additions and 0 deletions

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Distributed XGBoost: Column Split Version
====
* run ```bash mushroom-col.sh <n-mpi-process>```
- mushroom-col.sh starts xgboost-mpi job
* run ```bash mushroom-col-tcp.sh <n-process>```
- mushroom-col-tcp.sh starts xgboost job using xgboost's buildin allreduce
* run ```bash mushroom-col-python.sh <n-process>```

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#!/bin/bash
if [[ $# -ne 1 ]]
then
echo "Usage: nprocess"
exit -1
fi
#
# This script is same as mushroom-col except that we will be using xgboost instead of xgboost-mpi
# xgboost used built in tcp-based allreduce module, and can be run on more enviroment, so long as we know how to start job by modifying ../submit_job_tcp.py
#
rm -rf train.col* *.model
k=$1
# split the lib svm file into k subfiles
python splitsvm.py ../../demo/data/agaricus.txt.train train $k
# run xgboost mpi
../submit_job_tcp.py $k ../../xgboost mushroom-col.conf dsplit=col
# the model can be directly loaded by single machine xgboost solver, as usuall
../../xgboost mushroom-col.conf task=dump model_in=0002.model fmap=../../demo/data/featmap.txt name_dump=dump.nice.$k.txt
# run for one round, and continue training
../submit_job_tcp.py $k ../../xgboost mushroom-col.conf dsplit=col num_round=1
../submit_job_tcp.py $k ../../xgboost mushroom-col.conf dsplit=col model_in=0001.model
cat dump.nice.$k.txt

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* Mushroom: run ```bash mushroom-row.sh <n-mpi-process>```
* Machine: run ```bash machine-row.sh <n-mpi-process>```
- Machine case also include example to continue training from existing model
* Machine TCP: run ```bash machine-row-tcp.sh <n-mpi-process>```
- machine-col-tcp.sh starts xgboost job using xgboost's buildin allreduce
How to Use
====

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#!/bin/bash
if [[ $# -ne 1 ]]
then
echo "Usage: nprocess"
exit -1
fi
rm -rf train-machine.row* *.model
k=$1
# make machine data
cd ../../demo/regression/
python mapfeat.py
python mknfold.py machine.txt 1
cd -
# split the lib svm file into k subfiles
python splitrows.py ../../demo/regression/machine.txt.train train-machine $k
# run xgboost mpi
../submit_job_tcp.py $k ../../xgboost machine-row.conf dsplit=row num_round=3
# run xgboost-mpi save model 0001, continue to run from existing model
../submit_job_tcp.py $k ../../xgboost machine-row.conf dsplit=row num_round=1
../submit_job_tcp.py $k ../../xgboost machine-row.conf dsplit=row num_round=2 model_in=0001.model