xgboost/tracker/rabit_hadoop.py
2014-12-29 06:21:34 -08:00

75 lines
3.1 KiB
Python
Executable File

#!/usr/bin/python
"""
This is a script to submit rabit job using hadoop streaming
submit the rabit process as mappers of MapReduce
"""
import argparse
import sys
import os
import time
import subprocess
import rabit_tracker as tracker
#!!! Set path to hadoop and hadoop streaming jar here
hadoop_binary = None
hadoop_streaming_jar = None
# code
hadoop_home = os.getenv('HADOOP_HOME')
if hadoop_home != None:
if hadoop_binary == None:
hadoop_binary = hadoop_home + '/bin/hadoop'
assert os.path.exists(hadoop_binary), "HADDOP_HOME does not contain the hadoop binary"
if hadoop_streaming_jar == None:
hadoop_streaming_jar = hadoop_home + '/lib/hadoop-streaming.har'
assert os.path.exists(hadoop_streaming_jar), "HADDOP_HOME does not contain the haddop streaming jar"
if hadoop_binary == None or hadoop_streaming_jar == None:
print 'Warning: Cannot auto-detect path to hadoop and streaming jar, need to set them via arguments -hs and -hb'
print '\tTo enable auto-detection, you can set enviroment variable HADOOP_HOME or modify rabit_hadoop.py line 14'
parser = argparse.ArgumentParser(description='Rabit script to submit rabit jobs using Hadoop Streaming')
parser.add_argument('-n', '--nslaves', required=True, type=int,
help = 'number of slaves proccess to be launched')
parser.add_argument('-v', '--verbose', default=0, choices=[0, 1], type=int,
help = 'print more messages into the console')
parser.add_argument('-i', '--input', required=True,
help = 'input path in HDFS')
parser.add_argument('-o', '--output', required=True,
help = 'output path in HDFS')
parser.add_argument('-f', '--files', nargs = '*',
help = 'the cached file list in mapreduce')
parser.add_argument('command', nargs='+',
help = 'command for rabit program')
if hadoop_binary == None:
parser.add_argument('-hb', '--hadoop_binary', required = True,
help="path-to-hadoop binary folder")
else:
parser.add_argument('-hb', '--hadoop_binary', default = hadoop_binary,
help="path-to-hadoop binary folder")
if hadoop_streaming_jar == None:
parser.add_argument('-jar', '--hadoop_streaming_jar', required = True,
help='path-to hadoop streamimg jar file')
else:
parser.add_argument('-jar', '--hadoop_streaming_jar', default = hadoop_streaming_jar,
help='path-to hadoop streamimg jar file')
args = parser.parse_args()
def hadoop_streaming(nslaves, slave_args):
cmd = '%s jar %s -D mapred.map.tasks=%d' % (args.hadoop_binary, args.hadoop_streaming_jar, nslaves)
cmd += ' -input %s -output %s' % (args.input, args.output)
cmd += ' -mapper \"%s\" -reducer \"/bin/cat\" ' % (' '.join(args.command + slave_args))
fset = set()
if os.path.exists(args.command[0]):
fset.add(args.command[0])
for flst in args.files:
for f in flst.split('#'):
fset.add(f)
for f in fset:
cmd += ' -file %s' % f
print cmd
subprocess.check_call(cmd, shell = True)
tracker.submit(args.nslaves, [], fun_submit = hadoop_streaming, verbose = args.verbose)