xgboost/src/data/sparse_page_writer.cc
Jiaming Yuan 45876bf41b
Fix external memory for get column batches. (#4622)
* Fix external memory for get column batches.

This fixes two bugs:

* Use PushCSC for get column batches.
* Don't remove the created temporary directory before finishing test.

* Check all pages.
2019-06-30 09:56:49 +08:00

76 lines
2.3 KiB
C++

/*!
* Copyright (c) 2015 by Contributors
* \file sparse_batch_writer.cc
* \param Writer class sparse page.
*/
#include <xgboost/base.h>
#include <xgboost/logging.h>
#include "./sparse_page_writer.h"
#if DMLC_ENABLE_STD_THREAD
namespace xgboost {
namespace data {
SparsePageWriter::SparsePageWriter(
const std::vector<std::string>& name_shards,
const std::vector<std::string>& format_shards,
size_t extra_buffer_capacity)
: num_free_buffer_(extra_buffer_capacity + name_shards.size()),
clock_ptr_(0),
workers_(name_shards.size()),
qworkers_(name_shards.size()) {
CHECK_EQ(name_shards.size(), format_shards.size());
// start writer threads
for (size_t i = 0; i < name_shards.size(); ++i) {
std::string name_shard = name_shards[i];
std::string format_shard = format_shards[i];
auto* wqueue = &qworkers_[i];
workers_[i].reset(new std::thread(
[this, name_shard, format_shard, wqueue] () {
std::unique_ptr<dmlc::Stream> fo(
dmlc::Stream::Create(name_shard.c_str(), "w"));
std::unique_ptr<SparsePageFormat> fmt(
SparsePageFormat::Create(format_shard));
fo->Write(format_shard);
std::shared_ptr<SparsePage> page;
while (wqueue->Pop(&page)) {
if (page == nullptr) break;
fmt->Write(*page, fo.get());
qrecycle_.Push(std::move(page));
}
fo.reset(nullptr);
LOG(INFO) << "SparsePage::Writer Finished writing to " << name_shard;
}));
}
}
SparsePageWriter::~SparsePageWriter() {
for (auto& queue : qworkers_) {
// use nullptr to signal termination.
std::shared_ptr<SparsePage> sig(nullptr);
queue.Push(std::move(sig));
}
for (auto& thread : workers_) {
thread->join();
}
}
void SparsePageWriter::PushWrite(std::shared_ptr<SparsePage>&& page) {
qworkers_[clock_ptr_].Push(std::move(page));
clock_ptr_ = (clock_ptr_ + 1) % workers_.size();
}
void SparsePageWriter::Alloc(std::shared_ptr<SparsePage>* out_page) {
CHECK(*out_page == nullptr);
if (num_free_buffer_ != 0) {
out_page->reset(new SparsePage());
--num_free_buffer_;
} else {
CHECK(qrecycle_.Pop(out_page));
}
}
} // namespace data
} // namespace xgboost
#endif // DMLC_ENABLE_STD_THREAD