require(DiagrammeR) require(stringr) require(data.table) require(magrittr) text <- readLines('xgb.model.dump') %>% str_trim(side = "both") position <- str_match(text, "booster") %>% is.na %>% not %>% which %>% c(length(text)+1) extract <- function(x, pattern) str_extract(x, pattern) %>% str_split("=") %>% lapply(function(x) x[2] %>% as.numeric) %>% unlist addTreeId <- function(x, i) paste(i,x,sep = "-") allTrees <- data.table() for(i in 1:(length(position)-1)){ tree <- text[(position[i]+1):(position[i+1]-1)] notLeaf <- str_match(tree, "leaf") %>% is.na leaf <- notLeaf %>% not %>% tree[.] branch <- notLeaf %>% tree[.] idBranch <- str_extract(branch, "\\d*:") %>% str_replace(":", "") %>% addTreeId(i) idLeaf <- str_extract(leaf, "\\d*:") %>% str_replace(":", "") %>% addTreeId(i) featureBranch <- str_extract(branch, "f\\d*<") %>% str_replace("<", "") %>% str_replace("f", "") %>% as.numeric featureLeaf <- rep("Leaf", length(leaf)) splitBranch <- str_extract(branch, "<\\d*\\.*\\d*\\]") %>% str_replace("<", "") %>% str_replace("\\]", "") splitLeaf <- rep(NA, length(leaf)) yesBranch <- extract(branch, "yes=\\d*") %>% addTreeId(i) yesLeaf <- rep(NA, length(leaf)) noBranch <- extract(branch, "no=\\d*") %>% addTreeId(i) noLeaf <- rep(NA, length(leaf)) missingBranch <- extract(branch, "missing=\\d+") %>% addTreeId(i) missingLeaf <- rep(NA, length(leaf)) qualityBranch <- extract(branch, "gain=\\d*\\.*\\d*") qualityLeaf <- extract(leaf, "leaf=\\-*\\d*\\.*\\d*") coverBranch <- extract(branch, "cover=\\d*\\.*\\d*") coverLeaf <- extract(leaf, "cover=\\d*\\.*\\d*") dt <- data.table(ID = c(idBranch, idLeaf), Feature = c(featureBranch, featureLeaf), Split = c(splitBranch, splitLeaf), Yes = c(yesBranch, yesLeaf), No = c(noBranch, noLeaf), Missing = c(missingBranch, missingLeaf), Quality = c(qualityBranch, qualityLeaf), Cover = c(coverBranch, coverLeaf))[order(ID)][,Tree:=i] set(dt, i = which(dt[,Feature]!= "Leaf"), j = "YesFeature", value = dt[ID == dt[,Yes], Feature]) set(dt, i = which(dt[,Feature]!= "Leaf"), j = "NoFeature", value = dt[ID == dt[,No], Feature]) dt[Feature!="Leaf" ,yesPath:= paste(ID,"[", Feature, "]-->|< ", Split, "|", Yes, "[", YesFeature, "]", sep = "")] dt[Feature!="Leaf" ,noPath:= paste(ID,"[", Feature, "]-->|> ", Split, "|", No, "[", NoFeature, "]", sep = "")] #missingPath <- paste(dtBranch[,ID], "-->|Missing|", dtBranch[,Missing], sep = "") allTrees <- rbindlist(list(allTrees, dt), use.names = T, fill = F) } styles <- "classDef greenNode fill:#A2EB86, stroke:#04C4AB, stroke-width:2px;classDef redNode fill:#FFA070, stroke:#FF5E5E, stroke-width:2px;" yes <- allTrees[Feature!="Leaf", c(Yes)] %>% paste(collapse = ",") %>% paste("class ", ., " greenNode;", sep = "") no <- allTrees[Feature!="Leaf", c(No)] %>% paste(collapse = ",") %>% paste("class ", ., " redNode;", sep = "") path <- allTrees[Feature!="Leaf", c(yesPath, noPath)] %>% .[order(.)] %>% paste(sep = "", collapse = ";") %>% paste("graph LR", .,collapse = "", sep = ";") %>% paste(";", styles, yes, no, collapse = ";", sep = "") DiagrammeR(path, height =700) #}