############################################ Using XGBoost External Memory Version (beta) ############################################ There is no big difference between using external memory version and in-memory version. The only difference is the filename format. The external memory version takes in the following `URI `_ format: .. code-block:: none filename#cacheprefix The ``filename`` is the normal path to libsvm format file you want to load in, and ``cacheprefix`` is a path to a cache file that XGBoost will use for caching preprocessed data in binary form. .. note:: External memory is also available with GPU algorithms (i.e. when ``tree_method`` is set to ``gpu_hist``) To provide a simple example for illustration, extracting the code from `demo/guide-python/external_memory.py `_. If you have a dataset stored in a file similar to ``agaricus.txt.train`` with libSVM format, the external memory support can be enabled by: .. code-block:: python dtrain = DMatrix('../data/agaricus.txt.train#dtrain.cache') XGBoost will first load ``agaricus.txt.train`` in, preprocess it, then write to a new file named ``dtrain.cache`` as an on disk cache for storing preprocessed data in a internal binary format. For more notes about text input formats, see :doc:`/tutorials/input_format`. .. code-block:: python dtrain = xgb.DMatrix('../data/agaricus.txt.train#dtrain.cache') For CLI version, simply add the cache suffix, e.g. ``"../data/agaricus.txt.train#dtrain.cache"``. **************** Performance Note **************** * the parameter ``nthread`` should be set to number of **physical** cores - Most modern CPUs use hyperthreading, which means a 4 core CPU may carry 8 threads - Set ``nthread`` to be 4 for maximum performance in such case ******************* Distributed Version ******************* The external memory mode naturally works on distributed version, you can simply set path like .. code-block:: none data = "hdfs://path-to-data/#dtrain.cache" XGBoost will cache the data to the local position. When you run on YARN, the current folder is temporal so that you can directly use ``dtrain.cache`` to cache to current folder. ********** Usage Note ********** * This is an experimental version * Currently only importing from libsvm format is supported * OSX is not tested. - Contribution of ingestion from other common external memory data source is welcomed