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1482 Commits

Author SHA1 Message Date
Jiaming Yuan
2e4ea5ecc0
Support f64 for ubjson. (#10055) 2024-02-21 02:18:42 +08:00
Jiaming Yuan
8ea705e4d5
Support sample weight in sklearn custom objective. (#10050) 2024-02-21 00:43:14 +08:00
Jiaming Yuan
69a17d5114
Fix with None input. (#10052) 2024-02-20 22:34:22 +08:00
Jiaming Yuan
d37b83e8d9
Fix UBJSON with boolean value. (#10054) 2024-02-20 22:13:51 +08:00
Louis Desreumaux
edf501d227
Implement contribution prediction with QuantileDMatrix (#10043) 
---------

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2024-02-19 21:03:29 +08:00
Dmitry Razdoburdin
057f03cacc
[SYCL] Initial implementation of GHistIndexMatrix (#10045) 
Co-authored-by: Dmitry Razdoburdin <>
 2024-02-19 04:27:15 +08:00
github-actions[bot]
c182c584ca
[CI] Update RAPIDS to latest stable (#10042) 
Co-authored-by: hcho3 <hcho3@users.noreply.github.com>
 2024-02-13 15:29:09 -08:00
Philip Hyunsu Cho
4dfbe2a893
[CI] Test building for 32-bit arch (#10021) 
* [CI] Test building for 32-bit arch

* Update CMakeLists.txt

* Fix yaml

* Use Debian container

* Remove -Werror for 32-bit

* Revert "Remove -Werror for 32-bit"

This reverts commit c652bc6a037361bcceaf56fb01863210b462793d.

* Don't error for overloaded-virtual warning

* Ignore some warnings from dmlc-core

* Fix compiler warnings

* Fix formatting

* Apply suggestions from code review

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>

* Add more cast

---------

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2024-01-31 13:20:51 -08:00
Dmitry Razdoburdin
234674a0a6
[sync]. Add partition builder. (#10011) 
---------

Co-authored-by: Dmitry Razdoburdin <>
 2024-01-31 17:39:48 +08:00
Jiaming Yuan
54b71c8fba
Fix with black 24.1.1. (#10014) 2024-01-30 17:24:11 +08:00
Jiaming Yuan
65d7bf2dfe
Handle np integer in model slice and prediction. (#10007) 2024-01-26 04:58:48 +08:00
Philip Hyunsu Cho
c8f5d190c6
[CI] Stop Windows pipeline upon a failing pytest (#10003) 2024-01-24 22:54:21 -08:00
Jiaming Yuan
d12cc1090a
Refactor tests for training continuation. (#9997) 2024-01-24 16:07:19 +08:00
Philip Hyunsu Cho
2c8fa8b8b9
[CI] Skip MSVC when building R package (#9995) 
* [CI] Skip MSVC when building R package

* [CI] Stop building binary tarball for Windows

* Remove unused script
 2024-01-18 08:09:53 -08:00
Jiaming Yuan
bde20dd897
Remove benchmark scripts. (#9992) 2024-01-17 13:19:34 +08:00
Jiaming Yuan
cacb4b1fdd
Fix gain calculation in multi-target tree. (#9978) 2024-01-17 13:18:44 +08:00
Jiaming Yuan
0798e36d73
[breaking] Remove deprecated parameters in the skl interface. (#9986) 2024-01-15 20:40:05 +08:00
greydoubt
2de85d3241
[doc] slight cleanup (#9988) 2024-01-15 19:09:20 +08:00
Philip Hyunsu Cho
1168a68872
[jvm-packages] Update release scripts (#9983) 
* [jvm-packages] Add Scala version suffix to xgboost-jvm package (#9776)

* Update JVM script (#9714)

* Revamp pom.xml

* Update instructions in prepare_jvm_release.py

* Fix formatting

* [jvm-packages] Fix POM for xgboost-jvm metapackage (#9893)

* [jvm-packages] Fix POM for xgboost-jvm metapackage

* Add script for updating the Scala version

* Update change_scala_version.py to also change scala.version property (#9897)

* Remove 'release-cpu-only' profile

* Remove scala-2.13 profile; enable gpu package for Scala 2.13
 2024-01-12 10:37:55 -08:00
Jiaming Yuan
2f57bbde3c
Additional tests for attributes and model booosted rounds. (#9962) 2024-01-09 09:54:39 +08:00
Jiaming Yuan
b3eb5d0945
Use UBJ in Python checkpoint. (#9958) 2024-01-09 03:22:15 +08:00
Jiaming Yuan
9a30bdd313
Test loading models with invalid file extensions. (#9955) 2024-01-08 19:26:24 +08:00
Jiaming Yuan
38dd91f491
Save model in ubj as the default. (#9947) 2024-01-05 17:53:36 +08:00
Jiaming Yuan
c03a4d5088
Check support status for categorical features. (#9946) 2024-01-04 16:51:33 +08:00
Jiaming Yuan
621348abb3
Fix multi-output with alternating strategies. (#9933) 
---------

Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2024-01-04 16:41:13 +08:00
Jiaming Yuan
5f7b5a6921
Add tests for pickling with custom obj and metric. (#9943) 2024-01-04 14:52:48 +08:00
Jiaming Yuan
9f73127a23
Cleanup Python GPU tests. (#9934) 
* Cleanup Python GPU tests.

- Remove the use of `gpu_hist` and `gpu_id` in cudf/cupy tests.
- Move base margin test into the testing directory.
 2024-01-04 13:15:18 +08:00
Philip Hyunsu Cho
ef8bdaa047
[CI] Update machine images (#9932) 2023-12-29 11:15:38 -08:00
Jiaming Yuan
a7226c0222
Fix feature names with special characters. (#9923) 2023-12-28 22:45:13 +08:00
Jiaming Yuan
6a5f6ba694
[CI] Add timeout for distributed GPU tests. (#9917) 2023-12-24 00:09:05 +08:00
Jiaming Yuan
1aa8c8d9be
Support more scipy types. (#9881) 2023-12-14 18:28:37 +08:00
Philip Hyunsu Cho
936b22fdf3
[CI] Upload libxgboost4j.dylib (M1) to S3 bucket (#9886) 
* [CI] Upload libxgboost4j.dylib (M1) to S3 bucket

* Fix typo
 2023-12-13 15:25:51 -08:00
github-actions[bot]
d530d37707
[CI] Update RAPIDS to latest stable (#9857) 2023-12-12 22:58:03 +09:00
Dmitry Razdoburdin
43897b8296
Sycl implementation for objective functions (#9846) 
---------

Co-authored-by: Dmitry Razdoburdin <>
 2023-12-12 14:41:50 +08:00
Jiaming Yuan
faf0f2df10
Support dataframe data format in native XGBoost. (#9828) 
- Implement a columnar adapter.
- Refactor Python pandas handling code to avoid converting into a single numpy array.
- Add support in R for transforming columns.
- Support R data.frame and factor type.
 2023-12-12 09:56:31 +08:00
Jiaming Yuan
42de9206fc
Support multi-target, fit intercept for hinge. (#9850) 2023-12-08 05:50:41 +08:00
Jiaming Yuan
4bc1f3a388
[R] Bump requirement to 4.3.0. (#9847) 2023-12-07 00:12:45 +08:00
Dmitry Razdoburdin
381f1d3dc9
Add support inference on SYCL devices (#9800) 
---------

Co-authored-by: Dmitry Razdoburdin <>
Co-authored-by: Nikolay Petrov <nikolay.a.petrov@intel.com>
Co-authored-by: Alexandra <alexandra.epanchinzeva@intel.com>
 2023-12-04 16:15:57 +08:00
Jiaming Yuan
e78b46046e
[CI] Update R version on Linux. (#9835) 2023-12-02 11:03:17 +08:00
Jiaming Yuan
e9f149481e
[sklearn] Fix loading model attributes. (#9808) 2023-11-27 17:19:01 +08:00
Jiaming Yuan
3f4e22015a
Mark NCCL python test optional. (#9804) 
Skip the tests if XGBoost is not compiled with dlopen.
 2023-11-25 11:25:47 +08:00
Jiaming Yuan
8fe1a2213c
Cleanup code for distributed training. (#9805) 
* Cleanup code for distributed training.

- Merge `GetNcclResult` into nccl stub.
- Split up utilities from the main dask module.
- Let Channel return `Result` to accommodate nccl channel.
- Remove old `use_label_encoder` parameter.
 2023-11-25 09:10:56 +08:00
Jiaming Yuan
e9260de3f3
[breaking] Remove dense libsvm parser plugin. (#9799) 2023-11-23 00:12:39 +08:00
Jiaming Yuan
0715ab3c10
Use dlopen to load NCCL. (#9796) 
This PR adds optional support for loading nccl with `dlopen` as an alternative of compile time linking. This is to address the size bloat issue with the PyPI binary release.
- Add CMake option to load `nccl` at runtime.
- Add an NCCL stub.

After this, `nccl` will be fetched from PyPI when using pip to install XGBoost, either by a user or by `pyproject.toml`. Others who want to link the nccl at compile time can continue to do so without any change.

At the moment, this is Linux only since we only support MNMG on Linux.
 2023-11-22 19:27:31 +08:00
Jiaming Yuan
fedd9674c8
Implement column sampler in CUDA. (#9785) 
- CUDA implementation.
- Extract the broadcasting logic, we will need the context parameter after revamping the collective implementation.
- Some changes to the event loop for fixing a deadlock in CI.
- Move argsort into algorithms.cuh, add support for cuda stream.
 2023-11-17 04:29:08 +08:00
Bobby Wang
178cfe70a8
[pyspark][doc] Test and doc for stage-level scheduling. (#9786) 2023-11-16 18:15:59 +08:00
Jiaming Yuan
ada377c57e
[coll] Reduce the scope of lock in the event loop. (#9784) 2023-11-15 14:16:19 +08:00
Jiaming Yuan
6fd4a30667
[coll] Increase timeout for allgather test. (#9777) 2023-11-09 05:26:40 +08:00
Jiaming Yuan
44099f585d
[coll] Add C API for the tracker. (#9773) 2023-11-08 18:17:14 +08:00
Jiaming Yuan
06bdc15e9b
[coll] Pass context to various functions. (#9772) 
* [coll] Pass context to various functions.

In the future, the `Context` object would be required for collective operations, this PR
passes the context object to some required functions to prepare for swapping out the
implementation.
 2023-11-08 09:54:05 +08:00