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dependabot[bot]
2790e3091f
Bump maven-assembly-plugin from 2.6 to 3.4.2 in /jvm-packages (#8521) 
Bumps [maven-assembly-plugin](https://github.com/apache/maven-assembly-plugin) from 2.6 to 3.4.2.
- [Release notes](https://github.com/apache/maven-assembly-plugin/releases)
- [Commits](https://github.com/apache/maven-assembly-plugin/compare/maven-assembly-plugin-2.6...maven-assembly-plugin-3.4.2)

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 2022-12-06 04:07:04 +08:00
dependabot[bot]
0c1769b3a5
Bump maven-javadoc-plugin in /jvm-packages/xgboost4j (#8534) 
Bumps [maven-javadoc-plugin](https://github.com/apache/maven-javadoc-plugin) from 2.10.3 to 3.4.1.
- [Release notes](https://github.com/apache/maven-javadoc-plugin/releases)
- [Commits](https://github.com/apache/maven-javadoc-plugin/compare/maven-javadoc-plugin-2.10.3...maven-javadoc-plugin-3.4.1)

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 2022-12-06 02:30:46 +08:00
dependabot[bot]
67752e3967
Bump scala-maven-plugin from 3.2.2 to 4.8.0 in /jvm-packages (#8532) 
Bumps scala-maven-plugin from 3.2.2 to 4.8.0.

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 2022-12-06 00:58:30 +08:00
Philip Hyunsu Cho
42c5ee5588
[jvm-packages] Bump version of akka packages (#8524) 2022-12-05 22:45:00 +08:00
dependabot[bot]
d8d2eefa63
Bump junit from 4.13.1 to 4.13.2 in /jvm-packages/xgboost4j-gpu (#8516) 
Bumps [junit](https://github.com/junit-team/junit4) from 4.13.1 to 4.13.2.
- [Release notes](https://github.com/junit-team/junit4/releases)
- [Changelog](https://github.com/junit-team/junit4/blob/main/doc/ReleaseNotes4.13.1.md)
- [Commits](https://github.com/junit-team/junit4/compare/r4.13.1...r4.13.2)

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  update-type: version-update:semver-patch
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 2022-12-05 19:11:33 +08:00
dependabot[bot]
8e8d3ac708
Bump kryo from 4.0.2 to 5.3.0 in /jvm-packages (#8503) 
Bumps [kryo](https://github.com/EsotericSoftware/kryo) from 4.0.2 to 5.3.0.
- [Release notes](https://github.com/EsotericSoftware/kryo/releases)
- [Commits](https://github.com/EsotericSoftware/kryo/compare/kryo-parent-4.0.2...kryo-parent-5.3.0)

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 2022-12-05 18:01:59 +08:00
dependabot[bot]
3bfe90c183
Bump exec-maven-plugin in /jvm-packages/xgboost4j-gpu (#8531) 
Bumps [exec-maven-plugin](https://github.com/mojohaus/exec-maven-plugin) from 1.6.0 to 3.1.0.
- [Release notes](https://github.com/mojohaus/exec-maven-plugin/releases)
- [Commits](https://github.com/mojohaus/exec-maven-plugin/compare/exec-maven-plugin-1.6.0...exec-maven-plugin-3.1.0)

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 2022-12-05 17:41:41 +08:00
dependabot[bot]
a903241fbf
Bump maven-javadoc-plugin in /jvm-packages/xgboost4j-gpu (#8530) 
Bumps [maven-javadoc-plugin](https://github.com/apache/maven-javadoc-plugin) from 2.10.3 to 3.4.1.
- [Release notes](https://github.com/apache/maven-javadoc-plugin/releases)
- [Commits](https://github.com/apache/maven-javadoc-plugin/compare/maven-javadoc-plugin-2.10.3...maven-javadoc-plugin-3.4.1)

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 2022-12-05 16:32:08 +08:00
Bobby Wang
f1e9bbcee5
[breakinig] [jvm-packages] change DeviceQuantileDmatrix into QuantileDMatrix (#8461) 2022-12-05 12:23:21 +08:00
dependabot[bot]
c0609b98f1
Bump exec-maven-plugin from 1.6.0 to 3.1.0 in /jvm-packages/xgboost4j (#8518) 
Bumps [exec-maven-plugin](https://github.com/mojohaus/exec-maven-plugin) from 1.6.0 to 3.1.0.
- [Release notes](https://github.com/mojohaus/exec-maven-plugin/releases)
- [Commits](https://github.com/mojohaus/exec-maven-plugin/compare/exec-maven-plugin-1.6.0...exec-maven-plugin-3.1.0)

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 2022-12-02 17:24:22 -08:00
dependabot[bot]
fcafd3a777
Bump maven-jar-plugin from 3.0.2 to 3.3.0 in /jvm-packages (#8506) 
Bumps [maven-jar-plugin](https://github.com/apache/maven-jar-plugin) from 3.0.2 to 3.3.0.
- [Release notes](https://github.com/apache/maven-jar-plugin/releases)
- [Commits](https://github.com/apache/maven-jar-plugin/compare/maven-jar-plugin-3.0.2...maven-jar-plugin-3.3.0)

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 2022-12-02 17:21:01 -08:00
dependabot[bot]
b23e97f8b0
Bump maven-resources-plugin from 3.1.0 to 3.3.0 in /jvm-packages (#8504) 
Bumps [maven-resources-plugin](https://github.com/apache/maven-resources-plugin) from 3.1.0 to 3.3.0.
- [Release notes](https://github.com/apache/maven-resources-plugin/releases)
- [Commits](https://github.com/apache/maven-resources-plugin/compare/maven-resources-plugin-3.1.0...maven-resources-plugin-3.3.0)

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 2022-12-02 17:20:37 -08:00
dependabot[bot]
f747e05eac
Bump maven-deploy-plugin from 2.8.2 to 3.0.0 in /jvm-packages (#8502) 
Bumps [maven-deploy-plugin](https://github.com/apache/maven-deploy-plugin) from 2.8.2 to 3.0.0.
- [Release notes](https://github.com/apache/maven-deploy-plugin/releases)
- [Commits](https://github.com/apache/maven-deploy-plugin/compare/maven-deploy-plugin-2.8.2...maven-deploy-plugin-3.0.0)

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 2022-12-01 16:39:59 -08:00
Philip Hyunsu Cho
2546d139d6
[jvm-packages] Add missing commons-lang3 dependency to xgboost4j-gpu (#8508) 
* [jvm-packages] Add missing commons-lang3 dependency to xgboost4j-gpu

* Update commons-lang3
 2022-12-01 16:27:11 -08:00
Philip Hyunsu Cho
f550109641
Bump some old dependencies of JVM packages (#8456) 2022-11-30 23:04:08 -08:00
Jiaming Yuan
284dcf8d22
Add script for change version. (#8443) 
- Replace jvm regex replacement script with mvn command.
- Replace cmake script for python version with python script.
- Automate rest of the manual steps.

The script can handle dev branch, rc release, and formal release version.
 2022-11-24 00:06:39 +08:00
Robert Maynard
16f96b6cfb
Work with newer thrust and libcudacxx (#8454) 
* Thrust 1.17 removes the experimental/pinned_allocator.

When xgboost is brought into a large project it can
be compiled against Thrust 1.17+ which don't offer
this experimental allocator.

To ensure that going forward xgboost works in all environments we provide a xgboost namespaced version of
the pinned_allocator that previously was in Thrust.
 2022-11-11 04:22:53 +08:00
Jiaming Yuan
f73520bfff
Bump development version to 2.0. (#8390) 2022-10-28 15:21:19 +08:00
Rong Ou
668b8a0ea4
[Breaking] Switch from rabit to the collective communicator (#8257) 
* Switch from rabit to the collective communicator

* fix size_t specialization

* really fix size_t

* try again

* add include

* more include

* fix lint errors

* remove rabit includes

* fix pylint error

* return dict from communicator context

* fix communicator shutdown

* fix dask test

* reset communicator mocklist

* fix distributed tests

* do not save device communicator

* fix jvm gpu tests

* add python test for federated communicator

* Update gputreeshap submodule

Co-authored-by: Hyunsu Philip Cho <chohyu01@cs.washington.edu>
 2022-10-05 14:39:01 -08:00
Jiaming Yuan
f835368bcf
Mark next release as 1.7 instead of 2.0 (#8281) 2022-09-28 14:33:37 +08:00
Bobby Wang
8d247f0d64
[jvm-packages] fix spark-rapids compatibility issue (#8240) 
* [jvm-packages] fix spark-rapids compatibility issue

spark-rapids (from 22.10) has shimmed GpuColumnVector, which means
we can't call it directly. So this PR call the UnshimmedGpuColumnVector
 2022-09-22 23:31:29 +08:00
Rong Ou
7d43e74e71
JNI wrapper for the collective communicator (#8242) 2022-09-21 04:20:25 +08:00
dependabot[bot]
93966b0d19
Bump hadoop-common from 3.2.3 to 3.2.4 in /jvm-packages/xgboost4j-flink (#8157) 
Bumps hadoop-common from 3.2.3 to 3.2.4.

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 2022-08-15 06:47:27 -08:00
Bobby Wang
a68580e2a7
[jvm-packages] fix executor crashing issue when transforming on xgboost4j-spark-gpu (#8025) 
* [jvm-packages] fix executor crashing issue when transforming on xgboost4j-spark-gpu

the API XGBoosterSetParam is not thread-safe. Dring the phase of transforming,
XGBoost runs several transforming tasks at a time, and each of them will set
the "gpu_id" and "predictor" parameters, so if several tasks (multi-threads)
all XGBoosterSetParam simultaneously, it may cause the memory to be corrupted
and cause SIGSEGV.

This PR first get the booster from broadcast and set to the correct gpu_id
and predictor, and then all transforming taskes will use the same booster to
do the transforming.
 2022-06-24 01:18:41 +08:00
Rong Ou
e5ec546da5
[Breaking] Remove rabit support for custom reductions and grow_local_histmaker updater (#7992) 2022-06-21 15:08:23 +08:00
Jiaming Yuan
bb47fd8c49
[jvm-packages] Change log level for tracker message. (#7968) 2022-06-09 18:15:08 +08:00
Bobby Wang
78694405a6
[jvm-packages] add jni for setting feature name and type (#7966) 2022-06-03 11:09:48 +08:00
Bobby Wang
545fd4548e
[jvm-packages] refactor xgboost read/write (#7956) 
1. Removed the duplicated Default XGBoost read/write which is copied from
  spark 2.3.x
2. Put some utils into util package
 2022-06-01 11:38:49 +08:00
Yang Jiandan
27c66f12d1
set log level as ERROR for trackerProcess has some stderr output (#7952) 2022-05-31 22:54:38 +08:00
Bobby Wang
6275cdc486
[jvm-packages] add format option when saving a model (#7940) 2022-05-30 15:49:59 +08:00
Bobby Wang
fbc3d861bb
[jvm-packages] remove default parameters (#7938) 2022-05-28 10:31:19 +08:00
Daniel Clausen
755d9d4609
[JVM-Packages] Auto-detection of MUSL is replaced by system properties (#7921) 
This PR removes auto-detection of MUSL-based Linux systems in favor of system properties the user can set to configure a specific path for a native library.
 2022-05-26 10:53:15 +08:00
Bobby Wang
5ef33adf68
[jvm-packges] set the correct objective if user doesn't explicitly set it (#7781) 2022-05-18 14:05:18 +08:00
Bobby Wang
b41cf92dc2
[jvm-packages] move dmatrix building into rabit context for cpu pipeline (#7908) 2022-05-17 14:52:25 +08:00
Bobby Wang
11e46e4bc0
[Breaking][jvm-packages] make classification model be xgboost-compatible (#7896) 2022-05-14 15:43:05 +08:00
Bobby Wang
9fa7ed1743
[Breaking][jvm-packages] remove timeoutRequestWorkers parameter (#7839) 2022-05-13 16:26:25 +08:00
Michael Allman
f7db16add1
Ignore all Java exceptions when looking for Linux musl support (#7844) 2022-04-28 15:44:30 +08:00
Bobby Wang
a94e1b172e
[jvm-packages] Fix model compatibility (#7845) 2022-04-28 02:05:38 +08:00
Bobby Wang
686caad40c
[jvm-package] remove the coalesce in barrier mode (#7846) 2022-04-27 23:34:22 +08:00
Bobby Wang
dc2e699656
[Breaking][jvm-packages] Use barrier execution mode (#7836) 
With the introduction of the barrier execution mode. we don't need to kill SparkContext when some xgboost tasks failed. Instead, Spark will handle the errors for us. So in this PR, `killSparkContextOnWorkerFailure` parameter is deleted.
 2022-04-25 17:09:52 +08:00
Bobby Wang
c45665a55a
[jvm-packages] move the dmatrix building into rabit context (#7823) 
This fixes the QuantileDeviceDMatrix in distributed environment.
 2022-04-23 00:06:50 +08:00
Bobby Wang
2d83b2ad8f
[jvm-packages] add hostIp and python exec for rabit tracker (#7808) 2022-04-15 16:28:43 +08:00
dependabot[bot]
1bb1913811
Bump hadoop-common from 2.10.1 to 3.2.3 in /jvm-packages/xgboost4j-flink (#7801) 
Bumps hadoop-common from 2.10.1 to 3.2.3.

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 2022-04-13 22:24:44 +08:00
Bobby Wang
3f536b5308
[jvm-packages] fix evaluation when featuresCols is used (#7798) 2022-04-13 12:52:50 +08:00
Bobby Wang
118192f116
[jvm-packages] xgboost4j-spark should work when featuresCols is specified (#7789) 2022-04-08 13:21:04 +08:00
Bobby Wang
729d227b89
[jvm-packages] remove the dep of com.fasterxml.jackson (#7791) 2022-04-08 13:04:34 +08:00
Bobby Wang
2454407f3a
[jvm-packages] unify setFeaturesCol API for XGBoostRegressor (#7784) 2022-04-05 13:35:33 +08:00
Jiaming Yuan
522636cb52
Bump version. (#7769) 2022-03-31 06:33:22 +08:00
Oleksandr Pryimak
f5b20286e2
[jvm-packages] Launch dev jvm image under my user (#4676) 
Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2022-03-23 10:39:51 -07:00
Aging
f20ffa8db3
Update JVM dev build Dockerfile and shell script (#6792) 
Co-authored-by: Zhuo Yuzhen <yuzhuo@paypal.com>
 2022-03-22 16:39:10 -07:00