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67 Commits

Author SHA1 Message Date
Jiaming Yuan
ccfc90e4c6
[rabit] Improved connection handling. (#9531) 
- Enable timeout.
- Report connection error from the system.
- Handle retry for both tracker connection and peer connection.
 2023-08-30 13:00:04 +08:00
Jiaming Yuan
90ef250ea1
[rabit] Drop support for MPI backend. (#9525) 
- Add checks in cmake.
- Remove mpi related code.
 2023-08-28 21:01:22 +08:00
Jiaming Yuan
1b87a1d8f8
[rabit] Small cleanup to tracker initialization. (#9524) 
- Remove recover related code.
- Clean startup, no need to consider previously connected nodes.
 2023-08-27 05:10:59 +08:00
Jiaming Yuan
bc267dd729
Use ptr from mmap for GHistIndexMatrix and ColumnMatrix. (#9315) 
* Use ptr from mmap for `GHistIndexMatrix` and `ColumnMatrix`.

- Define a resource for holding various types of memory pointers.
- Define ref vector for holding resources.
- Swap the underlying resources for GHist and ColumnM.
- Add documentation for current status.
- s390x support is removed. It should work if you can compile XGBoost, all the old workaround code does is to get GCC to compile.
 2023-06-27 19:05:46 +08:00
Jiaming Yuan
ee6809e642
Use mmap for external memory. (#9282) 
- Have basic infrastructure for mmap.
- Release file write handle.
 2023-06-19 18:52:55 +08:00
Jiaming Yuan
fc8110ef79
Remove document and demo in RABIT. (#9246) 2023-06-06 08:20:10 +08:00
Jiaming Yuan
47b3cb6fb7
Remove unused parameters in RABIT. (#9108) 2023-05-05 05:26:24 +08:00
Philip Hyunsu Cho
6d8afb2218
[CI] Require C++17 + CMake 3.18; Use CUDA 11.8 in CI (#8853) 
* Update to C++17

* Turn off unity build

* Update CMake to 3.18

* Use MSVC 2022 + CUDA 11.8

* Re-create stack for worker images

* Allocate more disk space for Windows

* Tempiorarily disable clang-tidy

* RAPIDS now requires Python 3.10+

* Unpin cuda-python

* Use latest NCCL

* Use Ubuntu 20.04 in RMM image

* Mark failing mgpu test as xfail
 2023-03-01 09:22:24 -08:00
Rong Ou
77b069c25d
Support bitwise allreduce operations in the communicator (#8623) 2022-12-25 06:40:05 +08:00
Christian Clauss
ae27e228c4
xrange() was removed in Python 3 in favor or range() (#8371) 2022-10-27 16:36:14 +08:00
Rong Ou
668b8a0ea4
[Breaking] Switch from rabit to the collective communicator (#8257) 
* Switch from rabit to the collective communicator

* fix size_t specialization

* really fix size_t

* try again

* add include

* more include

* fix lint errors

* remove rabit includes

* fix pylint error

* return dict from communicator context

* fix communicator shutdown

* fix dask test

* reset communicator mocklist

* fix distributed tests

* do not save device communicator

* fix jvm gpu tests

* add python test for federated communicator

* Update gputreeshap submodule

Co-authored-by: Hyunsu Philip Cho <chohyu01@cs.washington.edu>
 2022-10-05 14:39:01 -08:00
Jiaming Yuan
b791446623
Initial support for IPv6 (#8225) 
- Merge rabit socket into XGBoost.
- Dask interface support.
- Add test to the socket.
 2022-09-21 18:06:50 +08:00
Jiaming Yuan
bc818316f2
Prepare for improving Windows networking compatibility. (#8234) 
* Prepare for improving Windows networking compatibility.

* Include dmlc filesystem indirectly as dmlc/filesystem.h includes windows.h, which
  conflicts with winsock2.h
* Define `NOMINMAX` conditionally.
* Link the winsock library when mysys32 is used.
* Add config file for read the doc.
 2022-09-10 15:16:49 +08:00
Jiaming Yuan
142a208a90
Fix compiler warnings. (#8022) 
- Remove/fix unused parameters
- Remove deprecated code in rabit.
- Update dmlc-core.
 2022-06-22 21:29:10 +08:00
Rong Ou
e5ec546da5
[Breaking] Remove rabit support for custom reductions and grow_local_histmaker updater (#7992) 2022-06-21 15:08:23 +08:00
Rong Ou
14ef38b834
Initial support for federated learning (#7831) 
Federated learning plugin for xgboost:
* A gRPC server to aggregate MPI-style requests (allgather, allreduce, broadcast) from federated workers.
* A Rabit engine for the federated environment.
* Integration test to simulate federated learning.

Additional followups are needed to address GPU support, better security, and privacy, etc.
 2022-05-05 21:49:22 +08:00
Louis Desreumaux
3886c3dd8f
Remove macro definitions of snprintf and vsnprintf (#7536) 2021-12-26 08:05:59 +08:00
Jiaming Yuan
345796825f
Optional find dependency in installed cmake config. (#7099) 
* Find dependency only when xgboost is built as static library.
* Resolve msvc warning.
* Add test for linking shared library.
 2021-07-11 17:20:55 +08:00
Andrew Ziem
3e7e426b36
Fix spelling in documents (#6948) 
* Update roxygen2 doc.

Co-authored-by: fis <jm.yuan@outlook.com>
 2021-05-11 20:44:36 +08:00
Jiaming Yuan
8747885a8b
Support Solaris. (#6578) 
* Add system header.

* Remove use of TR1 on Solaris

Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2021-01-07 09:05:05 +08:00
Jiaming Yuan
42d31d9dcb
Fix MPI build. (#6403) 2020-11-21 13:38:21 +08:00
Jiaming Yuan
debeae2509
[R] Fix warnings from R check --as-cran (#6374) 
* Remove exit and printf.

* Fix warnings.
 2020-11-11 18:39:37 +08:00
Sergio Gavilán
b181a88f9f
Reduced some C++ compiler warnings (#6197) 
* Removed some warnings

* Rebase with master

* Solved C++ Google Tests errors made by refactoring in order to remove warnings

* Undo renaming path -> path_

* Fix style check

Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2020-10-29 12:36:00 -07:00
Jiaming Yuan
b180223d18
Cleanup RABIT. (#6290) 
* Remove recovery and MPI speed tests.
* Remove readme.
* Remove Python binding.
* Add checks in C API.
 2020-10-27 08:48:22 +08:00
Jiaming Yuan
d61b628bf5
Remove RABIT CMake targets. (#6275) 
* Now it's built as part of libxgboost.
* Set correct C API error in RABIT initialization and finalization.
* Remove redundant message.
* Guard the tracker print C API.
 2020-10-27 01:30:20 +08:00
Jiaming Yuan
b5c2a47b20
Drop single point model recovery (#6262) 
* Pass rabit params in JVM package.
* Implement timeout using poll timeout parameter.
* Remove OOB data check.
 2020-10-21 15:27:03 +08:00
Jiaming Yuan
07945290a2
Remove unused RABIT targets. (#6110) 
* Remove rabit mock.
* Remove rabit base.
 2020-09-11 14:09:44 +08:00
Jiaming Yuan
c92d751ad1
Enable building rabit on Windows (#6105) 2020-09-11 11:54:46 +08:00
Jiaming Yuan
3dcd85fab5
Refactor rabit tests (#6096) 
* Merge rabit tests into XGBoost.
* Run them On CI.
* Simplification for CMake scripts.
 2020-09-09 12:30:29 +08:00
Jiaming Yuan
b0001a6e29
Correct style warnings from clang-tidy for rabit. (#6095) 2020-09-08 12:13:58 +08:00
fis
111968ca58 Merge rabit 2020-08-18 03:52:33 +08:00
fis
1c5904df3f Remove rabit. 2020-08-18 03:48:36 +08:00
Jiaming Yuan
f93f1c03fc
Rabit update. (#5978) 
* Remove parameter on JVM Packages.
 2020-08-11 09:17:32 +08:00
Philip Hyunsu Cho
23e2c6ec91
Upgrade Rabit (#5876) 2020-07-09 16:18:33 -07:00
Jiaming Yuan
26143ad0b1
Update rabit. (#5680) 2020-06-22 14:32:43 +08:00
Philip Hyunsu Cho
ef26bc45bf
Hide C++ symbols in libxgboost.so when building Python wheel (#5590) 
* Hide C++ symbols in libxgboost.so when building Python wheel

* Update Jenkinsfile

* Add test

* Upgrade rabit

* Add setup.py option.

Co-authored-by: fis <jm.yuan@outlook.com>
 2020-04-24 13:32:05 -07:00
Philip Hyunsu Cho
f7105fa44f
Update Rabit (#5237) 2020-01-28 02:05:01 -08:00
Chen Qin
b29b8c2f34 [jvm-packages] update rabit, surface new changes to spark, add parity and failure tests (#4966) 
* [phase 1] expose sets of rabit configurations to spark layer

* add back mutable import

* disable ring_mincount till https://github.com/dmlc/rabit/pull/106d

* Revert "disable ring_mincount till https://github.com/dmlc/rabit/pull/106d"

This reverts commit 65e95a98e24f5eb53c6ba9ef9b2379524258984d.

* apply latest rabit

* fix build error

* apply https://github.com/dmlc/xgboost/pull/4880

* downgrade cmake in rabit

* point to rabit with DMLC_ROOT fix

* relative path of rabit install prefix

* split rabit parameters to another trait

* misc

* misc

* Delete .classpath

* Delete .classpath

* Delete .classpath

* Update XGBoostClassifier.scala

* Update XGBoostRegressor.scala

* Update GeneralParams.scala

* Update GeneralParams.scala

* Update GeneralParams.scala

* Update GeneralParams.scala

* Delete .classpath

* Update RabitParams.scala

* Update .gitignore

* Update .gitignore

* apply rabitParams to training

* use string as rabit parameter value type

* cleanup

* add rabitEnv check

* point to dmlc/rabit

* per feedback

* update private scope

* misc

* update rabit

* add rabit_timtout, fix failing test.

* split tests

* allow build jvm with rabit mock

* pass mock failures to rabit with test

* add mock error and graceful handle rabit assertion error test

* split mvn test

* remove sign for test

* update rabit

* build jvm_packages with rabit mock

* point back to dmlc/rabit

* per feedback, update scala header

* cleanup pom

* per feedback

* try fix lint

* fix lint

* per feedback, remove bootstrap_cache

* per feedback 2

* try replace dev profile with passing mvn property

* fix build error

* remove mvn property and replace with env setting to build test jar

* per feedback

* revert copyright headlines, point to dmlc/rabit

* revert python lint

* remove multiple failure test case as retry is not enabled in spark

* Update core.py

* Update core.py

* per feedback, style fix
 2019-11-01 14:21:19 -07:00
Jiaming Yuan
010b8f1428 Revert "[jvm-packages] update rabit, surface new changes to spark, add parity and failure tests (#4876)" (#4965) 
This reverts commit 86ed01c4bbecef66e1bc4d02fb13116bd6130fae.
 2019-10-18 14:02:35 -07:00
Chen Qin
86ed01c4bb [jvm-packages] update rabit, surface new changes to spark, add parity and failure tests (#4876) 
* Expose sets of rabit configurations to spark layer
 2019-10-18 15:07:31 -04:00
Chen Qin
512f037e55 [rabit_bootstrap_cache ] failed xgb worker recover from other workers (#4808) 
* Better recovery support.  Restarting only the failed workers.
 2019-09-16 23:31:52 -04:00
Matthew Jones
b43f08bea5 updating rabit commit hash (#4718) 2019-07-30 06:51:54 -04:00
Nan Zhu
01b0c9047c
[jvm-packages] allowing chaining prediction (#4667) 
* add test for chaining prediction

* update rabit

* Update XGBoostGeneralSuite.scala
 2019-07-17 08:50:27 -07:00
Nan Zhu
abffbe014e
[jvm-packages] delete all constraints from spark layer about obj and eval metrics and handle error in jvm layer (#4560) 
* temp

* prediction part

* remove supported*

* add for test

* fix param name

* add rabit

* update rabit

* return value of rabit init

* eliminate compilation warnings

* update rabit

* shutdown

* update rabit again

* check sparkcontext shutdown

* fix logic

* sleep

* fix tests

* test with relaxed threshold

* create new thread each time

* stop for job quitting

* udpate rabit

* update rabit

* update rabit

* update git modules
 2019-06-27 08:47:37 -07:00
Nan Zhu
37dc82c3ff
[jvm-packages] allow partial evaluation of dataframe before prediction (#4407) 
* allow partial evaluation of dataframe before prediction

* resume spark test

* comments

* Run unit tests after building JVM packages
 2019-04-26 21:02:40 -07:00
Jiaming Yuan
0ff84d950e
Upgrade rabit. (#4159) 2019-02-18 22:16:58 +08:00
Chen Qin
87f49995be update rabit (#3835) 2018-10-30 09:15:19 -07:00
Tong He
e6696337e4 Fix CRAN check for lintr (#3372) 
* fix CRAN check

* Update submodules dmlc-core and rabit

* Add kintr to rmingw test
 2018-06-18 12:53:52 -07:00
Dave Challis
8efbadcde4 Point rabit submodule at latest commit from master. (#3330) 2018-05-28 10:21:10 -07:00
Rory Mitchell
a185ddfe03
Implement GPU accelerated coordinate descent algorithm (#3178) 
* Implement GPU accelerated coordinate descent algorithm. 

* Exclude external memory tests for GPU
 2018-04-20 14:56:35 +12:00