Commit Graph
5643 Commits
Author SHA1 Message Date
Jiaming Yuan 3a4f51f39f Avoid calling CUDA code on CPU for linear model. (#7154) 2021-09-01 10:45:31 +08:00
Jiaming Yuan ba69244a94 Restore the custom double atomic add. (#7198) 2021-08-28 18:30:42 +08:00
Jiaming YuanandAndy Adinets 7a1d67f9cb [breaking] Use integer atomic for GPU histogram. (#7180)
On GPU we use rouding factor to truncate the gradient for deterministic results. This PR changes the gradient representation to fixed point number with exponent aligned with rounding factor.

    [breaking] Drop non-deterministic histogram.
    Use fixed point for shared memory.

This PR is to improve the performance of GPU Hist. 

Co-authored-by: Andy Adinets <aadinets@nvidia.com>
2021-08-28 05:17:05 +08:00
Jiaming Yuan e7d7ab6bc3 Better error message for ncclUnhandledCudaError. (#7190) 2021-08-27 10:29:22 +08:00
Philip Hyunsu Cho b70e07da1f [CI] Clean up in beginning of each task in Win CI (#7189) 2021-08-25 04:15:22 -07:00
Jiaming Yuan cdfaa705f3 Fix building on CUDA 11.0. (#7187) 2021-08-25 02:57:53 -07:00
Philip Hyunsu Cho 3060f0b562 [CI] Automatically build GPU-enabled R package for Windows (#7185)
* [CI] Automatically build GPU-enabled R package for Windows

* Update Jenkinsfile-win64

* Build R package for the release branch only

* Update install doc
2021-08-25 02:11:01 -07:00
Jiaming Yuan 9c64618cb6 [breaking] Remove CUDA sm_35, add sm_86 (#7182) 2021-08-25 16:04:23 +08:00
Philip Hyunsu Cho d04312b9c0 [CI] Fix hanging Python setup in Windows CI (#7186) 2021-08-24 22:03:51 -07:00
Jiaming Yuan ee8d1f5ed8 Fix histogram truncation. (#7181)
* Fix truncation.

* Lint.

* lint.
2021-08-24 18:34:32 -07:00
Jiaming Yuan 3290a4f3ed Re-enable feature validation in predict proba. (#7177) 2021-08-22 15:28:08 +08:00
Jiaming Yuan bf562bd33c Remove unused code. (#7175) 2021-08-18 14:02:19 +08:00
Anton Kostin 01b7acba30 Update conf.py (#7174) 2021-08-17 03:38:26 +08:00
Anton Kostin ec849ec335 Update README.md (#7173) 2021-08-17 03:37:53 +08:00
Martin Petříček 46c46829ce Fix model loading from stream (#7067)
Fix bug introduced in 17913713b5 (allow loading from byte array)

When loading model from stream, only last buffer read from the input stream is used to construct the model.

This may work for models smaller than 1 MiB (if you are lucky enough to read the whole model at once), but will always fail if the model is larger.
2021-08-15 21:04:33 +08:00
Jiaming Yuan 6bcbc77226 [doc] Fix typo. [skip ci] (#7170) 2021-08-13 03:48:16 +08:00
Jiaming Yuan 3f38d983a6 Fix prediction configuration. (#7159)
After the predictor parameter was added to the constructor, this configuration was broken.
2021-08-11 16:34:36 +08:00
Jiaming Yuan 9600ca83f3 Remove synchronization in monitor. (#7164)
* Remove synchronization in monitor.

Calling rabit functions during destruction is flaky.

* Add xgboost prefix to nvtx marker.
2021-08-11 16:33:53 +08:00
Jiaming Yuan 149f209af6 Extract histogram builder from CPU Hist. (#7152)
* Extract the CPU histogram builder.
* Fix tests.
* Reduce number of histograms being built.
2021-08-09 21:15:21 +08:00
Philip Hyunsu Cho 336af4f974 Work around a segfault observed in SparsePage::Push() (#7161)
* Work around a segfault observed in SparsePage::Push()

* Revert "Work around a segfault observed in SparsePage::Push()"

This reverts commit 30934844d00908750a5442082eb4769b1489f6a9.

* Don't call vector::resize() inside OpenMP block

* Set GITHUB_PAT env var to fix R tests

* Use built-in GITHUB_TOKEN
2021-08-08 02:12:30 -07:00
AJ Schmidtandptaylor f7003dc819 Include cpack (#7160)
Co-authored-by: ptaylor <paul.e.taylor@me.com>
2021-08-07 00:57:34 +08:00
Jiaming Yuan 8a84be37b8 Pass scikit learn estimator checks for regressor. (#7130)
* Check data shape.
* Check labels.
2021-08-03 18:58:20 +08:00
Jiaming Yuan 8ee127469f [R] Fix nthread in DMatrix constructor. (#7127)
* Break the R C API for nthread.
2021-08-03 17:39:25 +08:00
Jiaming Yuan ba47eda61b [doc] Use figure directive. (#7143) 2021-08-03 15:56:25 +08:00
Jiaming Yuan e2c406f5c8 Support min_delta in early stopping. (#7137)
* Support `min_delta` in early stopping.

* Remove abs_tol.
2021-08-03 14:29:17 +08:00
Jiaming Yuan 7bdedacb54 Document for process_type. (#7135)
* Update document for prune and refresh.

* Add demo.
2021-08-03 13:11:52 +08:00
Jiaming Yuan d080b5a953 Fix model slicing. (#7149)
* Use correct pointer.
* Remove best_iteration/best_score.
2021-08-03 11:51:56 +08:00
Jiaming Yuan 36346f8f56 C API demo for inference. (#7151) 2021-08-03 00:46:47 +08:00
Jiaming Yuan 1369133916 [dask] Remove the workaround for segfault. (#7146) 2021-07-30 03:57:53 +08:00
Philip Hyunsu Cho f1a4a1ac95 [CI] Upgrade build image to CentOS 7 + GCC 8; require CUDA 10.1 and later (#7141) 2021-07-29 10:54:33 -07:00
graue70 dfdf0b08fc Fix typo and grammatical mistake in error message (#7134) 2021-07-28 17:17:05 +08:00
Gil Forsyth 92ae3abc97 [dask] Disallow importing non-dask estimators from xgboost.dask (#7133)
* Disallow importing non-dask estimators from xgboost.dask

This is mostly a style change, but also avoids a user error (that I have
committed on a few occasions).  Since `XGBRegressor` and `XGBClassifier`
are imported as parent classes for the `dask` estimators, without
defining an `__all__`, autocomplete (or muscle) memory will produce the
following with little prompting:

```
from xgboost.dask import XGBClassifier
```

There's nothing inherently wrong with that, but given that
`XGBClassifier` is not `dask` enabled, it can lead to confusing behavior
until you figure out you should've typed

```
from xgboost.dask import DaskXGBClassifier
```

Another option is to alias import the existing non-dask estimators.

* Remove base/iter class, add train predict funcs
2021-07-28 02:07:23 +08:00
Robert Maynard 1a75f43304 Allow compilation with nvcc 11.4 (#7131)
* Use type aliases for discard iterators

* update to include host_vector as thrust 1.12 doesn't bring it in as a side-effect

* cub::DispatchRadixSort requires signed offset types
2021-07-27 20:05:33 +08:00
Jiaming Yuan 7017dd5a26 [JVM-Packages] Use Python tracker in XGBoost for JVM package. (#7132) 2021-07-27 16:20:42 +08:00
Jiaming Yuan 48d5de80a2 [R] Fix softprob reshape. (#7126) 2021-07-27 15:25:17 +08:00
Jiaming Yuan 7ee7a95b84 Use upstream URI in distributed quantile tests. (#7129)
* Use upstream URI in distributed quantile tests.

* Fix test cv `PytestAssertRewriteWarning`.
2021-07-27 14:09:49 +08:00
Jiaming Yuan e88ac9cc54 [dask] Extend tree stats tests. (#7128)
* Add tests to GPU.
* Assert cover in children sums up to the parent.
2021-07-27 12:22:13 +08:00
Jiaming Yuan 778135f657 Fix parameter loading with training continuation. (#7121)
* Add a demo for training continuation.
2021-07-23 10:51:47 +08:00
Taewoo KimandTaewoo Kim 41e882f80b Check input value is duplicated when quantile queue is full (#7091)
Co-authored-by: Taewoo Kim <taewoo@layer6.com>
2021-07-23 03:07:01 +08:00
ShvetsKSandSHVETS, KIRILL <kirill.shvets@intel.com> caa9e527dd Remove extra sync for dense data (#7120)
Co-authored-by: SHVETS, KIRILL <kirill.shvets@intel.com>
2021-07-22 19:02:31 +08:00
Jiaming Yuan e6088366df Export Python Interface for external memory. (#7070)
* Add Python iterator interface.
* Add tests.
* Add demo.
* Add documents.
* Handle empty dataset.
2021-07-22 15:15:53 +08:00
farfarawayzyt e64ee6592f fix typo in src/common/hist.cc BuildHistKernel (#7116) 2021-07-21 19:53:05 +08:00
naveenkb 9f7f8b976d [XGBoost4J-Spark] bestIteration and bestScore for early stopping (#7095) 2021-07-19 18:46:49 +08:00
farfarawayzytandYuntian Zhang d7c14496d2 fix typo in arguments of PartitionBuilder::Init (#7113)
Co-authored-by: Yuntian Zhang <zhangyt@lamda.nju.edu.cn>
2021-07-16 15:46:22 +08:00
Jiaming Yuan bd1f3a38f0 Rewrite sparse dmatrix using callbacks. (#7092)
- Reduce dependency on dmlc parsers and provide an interface for users to load data by themselves.
- Remove use of threaded iterator and IO queue.
- Remove `page_size`.
- Make sure the number of pages in memory is bounded.
- Make sure the cache can not be violated.
- Provide an interface for internal algorithms to process data asynchronously.
2021-07-16 12:33:31 +08:00
Jiaming Yuan 2f524e9f41 [dask] Work around segfault in prediction. (#7112) 2021-07-16 04:27:05 +08:00
Jiaming Yuan abec3dbf6d Fix thread safety of softmax prediction. (#7104) 2021-07-16 02:06:55 +08:00
Philip Hyunsu Cho 2801d69fb7 [CI] Pin libomp to 11.1.0 (#7107) 2021-07-15 11:16:51 +08:00
Jiaming Yuan 8e8232fb4c [CI] Update R cache. (#7102) 2021-07-14 03:15:35 +08:00
Jiaming Yuan 345796825f Optional find dependency in installed cmake config. (#7099)
* Find dependency only when xgboost is built as static library.
* Resolve msvc warning.
* Add test for linking shared library.
2021-07-11 17:20:55 +08:00