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dependabot[bot]
e93b805a75
Bump scala.version from 2.12.17 to 2.12.18 in /jvm-packages (#9230) 
Bumps `scala.version` from 2.12.17 to 2.12.18.

Updates `scala-compiler` from 2.12.17 to 2.12.18
- [Release notes](https://github.com/scala/scala/releases)
- [Commits](https://github.com/scala/scala/compare/v2.12.17...v2.12.18)

Updates `scala-library` from 2.12.17 to 2.12.18
- [Release notes](https://github.com/scala/scala/releases)
- [Commits](https://github.com/scala/scala/compare/v2.12.17...v2.12.18)

---
updated-dependencies:
- dependency-name: org.scala-lang:scala-compiler
  dependency-type: direct:production
  update-type: version-update:semver-patch
- dependency-name: org.scala-lang:scala-library
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2023-06-01 10:44:43 -07:00
ZHAOKAI WANG
fa2ab1f021
TreeRefresher note word spelling modification (#9223) 2023-05-31 20:27:27 +08:00
Jiaming Yuan
aba4559c4f
[doc] Update dask demo. (#9201) 2023-05-31 05:01:02 +08:00
Jiaming Yuan
7f20eaed93
[doc] Troubleshoot nccl shared memory. [skip ci] (#9206) 2023-05-31 05:00:02 +08:00
Jiaming Yuan
62e9387cd5
[ci] Update PySpark version. (#9214) 2023-05-31 03:00:44 +08:00
Jiaming Yuan
17fd3f55e9
Optimize adapter element counting on GPU. (#9209) 
- Implement a simple `IterSpan` for passing iterators with size.
- Use shared memory for column size counts.
- Use one thread for each sample in row count to reduce atomic operations.
 2023-05-30 23:28:43 +08:00
Jiaming Yuan
097f11b6e0
Support CUDA f16 without transformation. (#9207) 
- Support f16 from cupy.
- Include CUDA header explicitly.
- Cleanup cmake nvtx support.
 2023-05-30 20:54:31 +08:00
dependabot[bot]
6f83d9c69a
Bump maven-project-info-reports-plugin in /jvm-packages (#9219) 
Bumps [maven-project-info-reports-plugin](https://github.com/apache/maven-project-info-reports-plugin) from 3.4.3 to 3.4.4.
- [Commits](https://github.com/apache/maven-project-info-reports-plugin/compare/maven-project-info-reports-plugin-3.4.3...maven-project-info-reports-plugin-3.4.4)

---
updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-project-info-reports-plugin
  dependency-type: direct:production
  update-type: version-update:semver-patch
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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2023-05-30 19:10:07 +08:00
Jiaming Yuan
ae7450ce54
Skip optional synchronization in thrust. (#9212) 2023-05-30 17:23:09 +08:00
Jean Lescut-Muller
ddec0f378c
[doc] Show derivative of the custom objective (#9213) 
---------

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2023-05-30 04:07:12 +08:00
Bobby Wang
320323f533
[pyspark] add parameters in the ctor of all estimators. (#9202) 
---------

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2023-05-29 05:58:16 +08:00
Jiaming Yuan
03bc6e6427
Remove unused variables. (#9210) 
- remove used variables.
- Remove signed comparison warnings.
 2023-05-28 05:24:15 +08:00
dependabot[bot]
d563d6d8f4
Bump scala-collection-compat_2.12 from 2.9.0 to 2.10.0 in /jvm-packages (#9208) 
Bumps [scala-collection-compat_2.12](https://github.com/scala/scala-collection-compat) from 2.9.0 to 2.10.0.
- [Release notes](https://github.com/scala/scala-collection-compat/releases)
- [Commits](https://github.com/scala/scala-collection-compat/compare/v2.9.0...v2.10.0)

---
updated-dependencies:
- dependency-name: org.scala-lang.modules:scala-collection-compat_2.12
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

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 2023-05-28 00:22:28 +08:00
Boris
a01df102c9
Scala 2.13 support. (#9099) 
1. Updated the test logic
2. Added smoke tests for Spark examples.
3. Added integration tests for Spark with Scala 2.13
 2023-05-27 19:34:02 +08:00
Jiaming Yuan
8c174ef2d3
[CI] Update images that are not related to binary release. (#9205) 
* [CI] Update images that are not related to the binary release.

- Update clang-tidy, prefer tools from the Ubuntu repository.
- Update GPU image to 22.04.
- Small cleanup to the tidy script.
- Remove gpu_jvm, which seems to be unused.
 2023-05-27 17:40:46 +08:00
michael-gendy-mention-me
c5677a2b2c
Remove type: ignore hints (#9197) 2023-05-27 07:48:28 +08:00
Jiaming Yuan
053aababd4
Avoid thrust logical operation. (#9199) 
Thrust implementation of `thrust::all_of/any_of/none_of` adopts an early stopping strategy
to bailout early by dividing the input into small batches. This is not ideal for data
validation as we expect all data to be valid. The strategy leads to excessive kernel
launches and stream synchronization.

* Use reduce from dh instead.
 2023-05-27 01:36:58 +08:00
dependabot[bot]
614f47c477
Bump flink-clients from 1.17.0 to 1.17.1 in /jvm-packages (#9203) 
Bumps [flink-clients](https://github.com/apache/flink) from 1.17.0 to 1.17.1.
- [Commits](https://github.com/apache/flink/compare/release-1.17.0...release-1.17.1)

---
updated-dependencies:
- dependency-name: org.apache.flink:flink-clients
  dependency-type: direct:production
  update-type: version-update:semver-patch
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 2023-05-26 18:42:24 +08:00
Rong Ou
5b69534b43
Support column split in multi-target hist (#9171) 2023-05-26 16:56:05 +08:00
Rong Ou
acd363033e
Fix running MGPU gtests (#9200) 2023-05-26 05:26:38 +08:00
dependabot[bot]
5d99b441d5
Bump scalatest_2.12 from 3.2.15 to 3.2.16 in /jvm-packages/xgboost4j (#9160) 
Bumps [scalatest_2.12](https://github.com/scalatest/scalatest) from 3.2.15 to 3.2.16.
- [Release notes](https://github.com/scalatest/scalatest/releases)
- [Commits](https://github.com/scalatest/scalatest/compare/release-3.2.15...release-3.2.16)

---
updated-dependencies:
- dependency-name: org.scalatest:scalatest_2.12
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

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 2023-05-24 09:09:25 +08:00
dependabot[bot]
e38e94ba4d
Bump rapids-4-spark_2.12 from 23.04.0 to 23.04.1 in /jvm-packages (#9158) 
Bumps rapids-4-spark_2.12 from 23.04.0 to 23.04.1.

---
updated-dependencies:
- dependency-name: com.nvidia:rapids-4-spark_2.12
  dependency-type: direct:production
...

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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2023-05-24 07:15:46 +08:00
dependabot[bot]
d6d83c818f
Bump maven-assembly-plugin from 3.5.0 to 3.6.0 in /jvm-packages (#9163) 
Bumps [maven-assembly-plugin](https://github.com/apache/maven-assembly-plugin) from 3.5.0 to 3.6.0.
- [Commits](https://github.com/apache/maven-assembly-plugin/compare/maven-assembly-plugin-3.5.0...maven-assembly-plugin-3.6.0)

---
updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-assembly-plugin
  dependency-type: direct:production
  update-type: version-update:semver-minor
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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2023-05-23 13:56:12 -07:00
dependabot[bot]
22b0fc0992
Bump maven-source-plugin from 3.2.1 to 3.3.0 in /jvm-packages (#9184) 
Bumps [maven-source-plugin](https://github.com/apache/maven-source-plugin) from 3.2.1 to 3.3.0.
- [Commits](https://github.com/apache/maven-source-plugin/compare/maven-source-plugin-3.2.1...maven-source-plugin-3.3.0)

---
updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-source-plugin
  dependency-type: direct:production
  update-type: version-update:semver-minor
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 2023-05-24 03:29:44 +08:00
dependabot[bot]
e67a0b8599
Bump maven-checkstyle-plugin from 3.2.2 to 3.3.0 in /jvm-packages (#9192) 
Bumps [maven-checkstyle-plugin](https://github.com/apache/maven-checkstyle-plugin) from 3.2.2 to 3.3.0.
- [Commits](https://github.com/apache/maven-checkstyle-plugin/compare/maven-checkstyle-plugin-3.2.2...maven-checkstyle-plugin-3.3.0)

---
updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-checkstyle-plugin
  dependency-type: direct:production
  update-type: version-update:semver-minor
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 2023-05-24 01:43:47 +08:00
Jiaming Yuan
3913ff470f
Import data lazily during tests. (#9176) 2023-05-23 03:58:31 +08:00
Bobby Wang
6274fba0a5
[pyspark] support tying (#9172) 2023-05-19 14:39:26 +08:00
Bobby Wang
caf326d508
[pyspark] Refactor and typing support for models (#9156) 2023-05-17 16:38:51 +08:00
Bobby Wang
cb370c4f7d
[jvm] separate spark.version for cpu and gpu (#9166) 2023-05-17 07:12:20 +08:00
Stephan T. Lavavej
7375bd058b
Fix IndexTransformIter. (#9155) 2023-05-12 21:25:54 +08:00
Stephan T. Lavavej
59edfdb315
Fix typo: _defined => defined (#9153) 2023-05-11 16:34:45 -07:00
Stephan T. Lavavej
779b82c098
Avoid redefining macros. (#9154) 2023-05-11 15:59:25 -07:00
Rong Ou
603f8ce2fa
Support hist in the partition builder under column split (#9120) 2023-05-11 05:24:29 +08:00
Rong Ou
52311dcec9
Fix multi-threaded gtests (#9148) 2023-05-10 19:15:32 +08:00
Jiaming Yuan
e4129ed6ee
[jvm-packages] Remove akka in tester. (#9149) 2023-05-10 14:10:58 +08:00
dependabot[bot]
2ab6660943
Bump maven-surefire-plugin in /jvm-packages/xgboost4j-spark (#9131) 
Bumps [maven-surefire-plugin](https://github.com/apache/maven-surefire) from 3.0.0 to 3.1.0.
- [Release notes](https://github.com/apache/maven-surefire/releases)
- [Commits](https://github.com/apache/maven-surefire/compare/surefire-3.0.0...surefire-3.1.0)

---
updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-surefire-plugin
  dependency-type: direct:production
  update-type: version-update:semver-minor
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Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2023-05-10 12:21:36 +08:00
dependabot[bot]
d21e7e5f82
Bump maven-gpg-plugin from 3.0.1 to 3.1.0 in /jvm-packages (#9136) 
Bumps [maven-gpg-plugin](https://github.com/apache/maven-gpg-plugin) from 3.0.1 to 3.1.0.
- [Commits](https://github.com/apache/maven-gpg-plugin/compare/maven-gpg-plugin-3.0.1...maven-gpg-plugin-3.1.0)

---
updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-gpg-plugin
  dependency-type: direct:production
  update-type: version-update:semver-minor
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 2023-05-10 10:21:36 +08:00
Philip Hyunsu Cho
0cd4382d72
Fix config-settings handling in pip install (#9115) 
* Fix config_settings handling in pip install

* Fix formatting

* Fix flag use_system_libxgboost

* Add setuptools to doc requirements.txt

* Fix mypy
 2023-05-09 17:54:20 -07:00
Jiaming Yuan
09b44915e7
[doc] Replace recommonmark with myst-parser. (#9125) 2023-05-10 08:11:36 +08:00
Jiaming Yuan
85988a3178
Wait for data CUDA stream instead of sync. (#9144) 
---------

Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2023-05-09 09:52:21 +08:00
Uriya Harpeness
a075aa24ba
Move python tool configurations to pyproject.toml, and add the python 3.11 classifier. (#9112) 2023-05-06 02:59:06 +08:00
Jiaming Yuan
55968ed3fa
Fix monotone constraints on CPU. (#9122) 2023-05-06 01:07:54 +08:00
Rong Ou
250b22dd22
Fix nvflare horizontal demo (#9124) 2023-05-05 16:48:22 +08:00
Jiaming Yuan
47b3cb6fb7
Remove unused parameters in RABIT. (#9108) 2023-05-05 05:26:24 +08:00
Philip Hyunsu Cho
07b2d5a26d
Add useful links to pyproject.toml (#9114) 2023-05-02 12:47:15 -07:00
Jiaming Yuan
08ce495b5d
Use Booster context in DMatrix. (#8896) 
- Pass context from booster to DMatrix.
- Use context instead of integer for `n_threads`.
- Check the consistency configuration for `max_bin`.
- Test for all combinations of initialization options.
 2023-04-28 21:47:14 +08:00
Jiaming Yuan
1f9a57d17b
[Breaking] Require format to be specified in input URI. (#9077) 
Previously, we use `libsvm` as default when format is not specified. However, the dmlc
data parser is not particularly robust against errors, and the most common type of error
is undefined format.

Along with which, we will recommend users to use other data loader instead. We will
continue the maintenance of the parsers as it's currently used for many internal tests
including federated learning.
 2023-04-28 19:45:15 +08:00
Bobby Wang
e922004329
[doc] fix the cudf installation [skip ci] (#9106) 2023-04-28 19:43:58 +08:00
Jiaming Yuan
17ff471616
Optimize array interface input. (#9090) 2023-04-28 18:01:58 +08:00
Rong Ou
fb941262b4
Add demo for vertical federated learning (#9103) 2023-04-28 16:03:21 +08:00