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27 Commits

Author SHA1 Message Date
Michael Mayer
074cad2343
[R] Finalizes switch to markdown doc (#10733) 
---------

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2024-08-27 01:25:06 +08:00
Michael Mayer
b949a4bf7b
[R] Work on Roxygen documentation (#10674) 2024-08-20 13:33:13 +08:00
david-cortes
caabee2135
[R] remove 'reshape' argument, let shapes be handled by core cpp library (#10330) 2024-08-18 23:31:38 +08:00
david-cortes
8998733ef4
[R] Rename BIAS -> (Intercept) (#10337) 2024-05-30 19:43:32 +08:00
david-cortes
f7005d32c1
[R] Use inplace predict (#9829) 
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Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2024-02-24 02:03:54 +08:00
david-cortes
1e72dc1276
[R] Add optional check on column names matching in predict (#10020) 2024-01-31 15:43:22 +08:00
david-cortes
c5d0608057
[R] Remove parameters and attributes related to ntree and rebase iterationrange (#9935) 2024-01-21 00:56:57 +08:00
david-cortes
d3a8d284ab
[R] On-demand serialization + standardization of attributes (#9924) 
---------

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2024-01-11 05:08:42 +08:00
david-cortes
9e33a10202
[R] Replace xgboost() with xgb.train() in most tests and examples (#9941) 2024-01-02 21:20:01 +08:00
Michael Mayer
b807f3e30c
[R] improve docstrings for "xgb.Booster.R" (#9906) 2023-12-21 10:01:30 +08:00
david-cortes
ddab49a8be
[doc][R] Update arguments for ellipsis in predict (#9868) 2023-12-12 12:13:47 +08:00
Jiaming Yuan
cac2cd2e94
[R] Set number of threads in demos and tests. (#9591) 
- Restrict the number of threads in IO.
- Specify the number of threads in demos and tests.
- Add helper scripts for checks.
 2023-09-23 21:44:03 +08:00
Krzysztof Dyba
e8a69013e6
[R] update predict docs (#8886) 2023-03-09 05:58:39 +08:00
david-cortes
7f738e7f6f
[R] Accept CSR data for predictions (#7615) 2022-01-30 00:54:57 +08:00
Jiaming Yuan
b56614e9b8
[R] Use new predict function. (#6819) 
* Call new C prediction API.
* Add `strict_shape`.
* Add `iterationrange`.
* Update document.
 2021-06-11 13:03:29 +08:00
Jiaming Yuan
911a902835
Merge model compatibility fixes from 1.0rc branch. (#5305) 
* Port test model compatibility.
* Port logit model fix.

https://github.com/dmlc/xgboost/pull/5248
https://github.com/dmlc/xgboost/pull/5281
 2020-02-13 20:41:58 +08:00
Jiaming Yuan
808f61081b
Update R doc by roxygen2. (#5201) 2020-01-15 10:49:17 +08:00
Tong He
7b74b1b64d fix additional files note (#4699) 
* fix additional files note

* Trigger CI

* Trigger CI
 2019-07-25 00:37:38 -07:00
James Lamb
5e97de6a41 fixed typos in R package docs (#4345) 
* fixed typos in R package docs

* updated verbosity parameter in xgb.train docs
 2019-04-21 15:54:11 +08:00
Vadim Khotilovich
5b662cbe1c
[R] R-interface for SHAP interactions (#3636) 
* add R-interface for SHAP interactions

* update docs for new roxygen version
 2018-08-30 19:06:21 -05:00
Vadim Khotilovich
e8a6597957 [R] maintenance Nov 2017; SHAP plots (#2888) 
* [R] fix predict contributions for data with no colnames

* [R] add a render parameter for xgb.plot.multi.trees; fixes #2628

* [R] update Rd's

* [R] remove unnecessary dep-package from R cmake install

* silence type warnings; readability

* [R] silence complaint about incomplete line at the end

* [R] initial version of xgb.plot.shap()

* [R] more work on xgb.plot.shap

* [R] enforce black font in xgb.plot.tree; fixes #2640

* [R] if feature names are available, check in predict that they are the same; fixes #2857

* [R] cran check and lint fixes

* remove tabs

* [R] add references; a test for plot.shap
 2017-12-05 09:45:34 -08:00
Vadim Khotilovich
b52db87d5c adding feature contributions to R and gblinear (#2295) 
* [gblinear] add features contribution prediction; fix DumpModel bug

* [gbtree] minor changes to PredContrib

* [R] add feature contribution prediction to R

* [R] bump up version; update NEWS

* [gblinear] fix the base_margin issue; fixes #1969

* [R] list of matrices as output of multiclass feature contributions

* [gblinear] make order of DumpModel coefficients consistent: group index changes the fastest
 2017-05-21 07:41:51 -04:00
Vadim Khotilovich
b4d97d3cb8 R maintenance Feb2017 (#2045) 
* [R] better argument check in xgb.DMatrix; fixes #1480

* [R] showsd was a dummy; fixes #2044

* [R] better categorical encoding explanation in vignette; fixes #1989

* [R] new roxygen version docs update
 2017-02-20 10:02:40 -08:00
Tong He
2f3958a455 Fix for CRAN Submission (#1826) 
* fix cran check

* change required R version because of utils::globalVariables

* temporary commit, monotone not working

* fix test

* fix doc

* fix doc

* fix cran note and warning

* improve checks

* fix urls
 2016-12-02 20:19:03 -08:00
Vadim Khotilovich
11efa038bd [R-package] various fixes for R CMD check (#1328) 
* [R] fix xgb.create.features

* [R] fixes for R CMD check
 2016-07-04 10:40:35 -07:00
Vadim Khotilovich
a0aa305268 [R] docs update - callbacks and parameter style 2016-06-27 01:59:58 -05:00
Vadim Khotilovich
71f402ac16 convert S4 to S3; add some extra methods to DMatrix 2016-03-27 19:22:22 -05:00