500 Commits

Author SHA1 Message Date
amdsc21
8cad8c693c sync up May15 2023 2023-05-15 18:59:18 +02:00
Jiaming Yuan
e4129ed6ee
[jvm-packages] Remove akka in tester. (#9149) 2023-05-10 14:10:58 +08:00
dependabot[bot]
2ab6660943
Bump maven-surefire-plugin in /jvm-packages/xgboost4j-spark (#9131)
Bumps [maven-surefire-plugin](https://github.com/apache/maven-surefire) from 3.0.0 to 3.1.0.
- [Release notes](https://github.com/apache/maven-surefire/releases)
- [Commits](https://github.com/apache/maven-surefire/compare/surefire-3.0.0...surefire-3.1.0)

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updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-surefire-plugin
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  update-type: version-update:semver-minor
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2023-05-10 12:21:36 +08:00
dependabot[bot]
d21e7e5f82
Bump maven-gpg-plugin from 3.0.1 to 3.1.0 in /jvm-packages (#9136)
Bumps [maven-gpg-plugin](https://github.com/apache/maven-gpg-plugin) from 3.0.1 to 3.1.0.
- [Commits](https://github.com/apache/maven-gpg-plugin/compare/maven-gpg-plugin-3.0.1...maven-gpg-plugin-3.1.0)

---
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2023-05-10 10:21:36 +08:00
amdsc21
5446c501af merge 23Mar01 2023-05-02 00:05:58 +02:00
Jiaming Yuan
1f9a57d17b
[Breaking] Require format to be specified in input URI. (#9077)
Previously, we use `libsvm` as default when format is not specified. However, the dmlc
data parser is not particularly robust against errors, and the most common type of error
is undefined format.

Along with which, we will recommend users to use other data loader instead. We will
continue the maintenance of the parsers as it's currently used for many internal tests
including federated learning.
2023-04-28 19:45:15 +08:00
Jiaming Yuan
101a2e643d
[jvm-packages] Bump rapids version. (#9097) 2023-04-27 09:46:46 +08:00
Boris
0e7377ba9c
Updated flink 1.8 -> 1.17. Added smoke tests for Flink (#9046) 2023-04-26 18:41:11 +08:00
dependabot[bot]
49ccae7fb9
Bump spark.version from 3.1.1 to 3.4.0 in /jvm-packages (#9039)
Bumps `spark.version` from 3.1.1 to 3.4.0.

Updates `spark-mllib_2.12` from 3.1.1 to 3.4.0

Updates `spark-core_2.12` from 3.1.1 to 3.4.0

Updates `spark-sql_2.12` from 3.1.1 to 3.4.0

---
updated-dependencies:
- dependency-name: org.apache.spark:spark-mllib_2.12
  dependency-type: direct:production
  update-type: version-update:semver-minor
- dependency-name: org.apache.spark:spark-core_2.12
  dependency-type: direct:production
  update-type: version-update:semver-minor
- dependency-name: org.apache.spark:spark-sql_2.12
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  update-type: version-update:semver-minor
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2023-04-26 01:32:06 +08:00
dependabot[bot]
a2cc78c1fb
Bump scala.version from 2.12.8 to 2.12.17 in /jvm-packages (#9083)
Bumps `scala.version` from 2.12.8 to 2.12.17.

Updates `scala-compiler` from 2.12.8 to 2.12.17
- [Release notes](https://github.com/scala/scala/releases)
- [Commits](https://github.com/scala/scala/compare/v2.12.8...v2.12.17)

Updates `scala-library` from 2.12.8 to 2.12.17
- [Release notes](https://github.com/scala/scala/releases)
- [Commits](https://github.com/scala/scala/compare/v2.12.8...v2.12.17)

---
updated-dependencies:
- dependency-name: org.scala-lang:scala-compiler
  dependency-type: direct:production
  update-type: version-update:semver-patch
- dependency-name: org.scala-lang:scala-library
  dependency-type: direct:production
  update-type: version-update:semver-patch
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2023-04-25 21:30:38 +08:00
Bobby Wang
d237378452
[jvm-packages] Clean up the dependencies after removing scala versioned tracker (#9078) 2023-04-24 17:49:08 +08:00
Jiaming Yuan
c512c3f46b
[jvm-packages] Bump rapids version. (#9056) 2023-04-22 15:46:44 +08:00
austinzh
3b742dc4f1
Stop using Rabit in predition (#9054) 2023-04-21 19:38:07 +08:00
dependabot[bot]
39b0fde0e7
Bump kryo from 5.4.0 to 5.5.0 in /jvm-packages (#9070)
Bumps [kryo](https://github.com/EsotericSoftware/kryo) from 5.4.0 to 5.5.0.
- [Release notes](https://github.com/EsotericSoftware/kryo/releases)
- [Commits](https://github.com/EsotericSoftware/kryo/compare/kryo-parent-5.4.0...kryo-parent-5.5.0)

---
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2023-04-21 18:16:34 +08:00
dependabot[bot]
ee84e22c8d
Bump maven-checkstyle-plugin from 3.2.1 to 3.2.2 in /jvm-packages (#9073)
Bumps [maven-checkstyle-plugin](https://github.com/apache/maven-checkstyle-plugin) from 3.2.1 to 3.2.2.
- [Release notes](https://github.com/apache/maven-checkstyle-plugin/releases)
- [Commits](https://github.com/apache/maven-checkstyle-plugin/compare/maven-checkstyle-plugin-3.2.1...maven-checkstyle-plugin-3.2.2)

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- dependency-name: org.apache.maven.plugins:maven-checkstyle-plugin
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  update-type: version-update:semver-patch
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2023-04-21 18:16:08 +08:00
dependabot[bot]
2acd78b44b
Bump maven-project-info-reports-plugin in /jvm-packages/xgboost4j (#9049)
Bumps [maven-project-info-reports-plugin](https://github.com/apache/maven-project-info-reports-plugin) from 3.4.2 to 3.4.3.
- [Release notes](https://github.com/apache/maven-project-info-reports-plugin/releases)
- [Commits](https://github.com/apache/maven-project-info-reports-plugin/compare/maven-project-info-reports-plugin-3.4.2...maven-project-info-reports-plugin-3.4.3)

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  update-type: version-update:semver-patch
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2023-04-21 00:10:45 +08:00
Emil Ejbyfeldt
a84a1fde02
[jvm-packages] Update scalatest to 3.2.15 (#8925)
---------

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
2023-04-20 22:16:56 +08:00
Jiaming Yuan
564df59204
[breaking] [jvm-packages] Remove scala-implemented tracker. (#9045) 2023-04-20 16:29:35 +08:00
amdsc21
c50cc424bc sync Mar 27 2023 2023-03-27 18:54:41 +02:00
dependabot[bot]
90645c4957
Bump maven-resources-plugin from 3.3.0 to 3.3.1 in /jvm-packages (#8980)
Bumps [maven-resources-plugin](https://github.com/apache/maven-resources-plugin) from 3.3.0 to 3.3.1.
- [Release notes](https://github.com/apache/maven-resources-plugin/releases)
- [Commits](https://github.com/apache/maven-resources-plugin/compare/maven-resources-plugin-3.3.0...maven-resources-plugin-3.3.1)

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- dependency-name: org.apache.maven.plugins:maven-resources-plugin
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  update-type: version-update:semver-patch
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2023-03-27 16:03:45 +08:00
dependabot[bot]
43878b10b6
Bump maven-deploy-plugin in /jvm-packages/xgboost4j-spark-gpu (#8973)
Bumps [maven-deploy-plugin](https://github.com/apache/maven-deploy-plugin) from 3.0.0 to 3.1.1.
- [Release notes](https://github.com/apache/maven-deploy-plugin/releases)
- [Commits](https://github.com/apache/maven-deploy-plugin/compare/maven-deploy-plugin-3.0.0...maven-deploy-plugin-3.1.1)

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- dependency-name: org.apache.maven.plugins:maven-deploy-plugin
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  update-type: version-update:semver-minor
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2023-03-27 12:47:13 +08:00
amdsc21
7fbc561e17 initial merge 2023-03-25 04:31:55 +01:00
dependabot[bot]
cff50fe3ef
Bump hadoop.version from 3.3.4 to 3.3.5 in /jvm-packages (#8962)
Bumps `hadoop.version` from 3.3.4 to 3.3.5.

Updates `hadoop-hdfs` from 3.3.4 to 3.3.5

Updates `hadoop-common` from 3.3.4 to 3.3.5

---
updated-dependencies:
- dependency-name: org.apache.hadoop:hadoop-hdfs
  dependency-type: direct:production
  update-type: version-update:semver-patch
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  dependency-type: direct:production
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2023-03-23 16:12:04 +08:00
dependabot[bot]
34092d7fd0
Bump maven-release-plugin in /jvm-packages/xgboost4j-spark (#8952)
Bumps [maven-release-plugin](https://github.com/apache/maven-release) from 2.5.3 to 3.0.0.
- [Release notes](https://github.com/apache/maven-release/releases)
- [Commits](https://github.com/apache/maven-release/compare/maven-release-2.5.3...maven-release-3.0.0)

---
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- dependency-name: org.apache.maven.plugins:maven-release-plugin
  dependency-type: direct:production
  update-type: version-update:semver-major
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2023-03-21 15:34:43 +08:00
Philip Hyunsu Cho
36263dd109
[jvm-packages] Use akka 2.6 (#8920) 2023-03-16 20:06:42 -07:00
Jiaming Yuan
26209a42a5
Define git attributes for renormalization. (#8921) 2023-03-16 02:43:11 +08:00
dependabot[bot]
fd016e43c6
Bump maven-surefire-plugin from 2.22.2 to 3.0.0 in /jvm-packages (#8917)
Bumps [maven-surefire-plugin](https://github.com/apache/maven-surefire) from 2.22.2 to 3.0.0.
- [Release notes](https://github.com/apache/maven-surefire/releases)
- [Commits](https://github.com/apache/maven-surefire/compare/surefire-2.22.2...surefire-3.0.0)

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- dependency-name: org.apache.maven.plugins:maven-surefire-plugin
  dependency-type: direct:production
  update-type: version-update:semver-major
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2023-03-15 18:51:46 +08:00
Jiaming Yuan
f186c87cf9
Check inf in data for all types of DMatrix. (#8911) 2023-03-15 11:24:35 +08:00
amdsc21
f0b8c02f15 merge latest changes 2023-03-10 22:10:20 +01:00
dependabot[bot]
85c3334c2b
Bump hadoop-common from 3.2.4 to 3.3.4 in /jvm-packages (#8882)
Bumps hadoop-common from 3.2.4 to 3.3.4.

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2023-03-08 13:15:39 +08:00
amdsc21
ed45aa2816 Merge branch 'master' into dev-hui 2023-03-08 00:39:33 +01:00
dependabot[bot]
f53055f75e
Bump maven-assembly-plugin from 3.4.2 to 3.5.0 in /jvm-packages (#8837)
Bumps [maven-assembly-plugin](https://github.com/apache/maven-assembly-plugin) from 3.4.2 to 3.5.0.
- [Release notes](https://github.com/apache/maven-assembly-plugin/releases)
- [Commits](https://github.com/apache/maven-assembly-plugin/compare/maven-assembly-plugin-3.4.2...maven-assembly-plugin-3.5.0)

---
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- dependency-name: org.apache.maven.plugins:maven-assembly-plugin
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2023-03-08 02:20:40 +08:00
dependabot[bot]
0f6c502d36
Bump scala-maven-plugin in /jvm-packages/xgboost4j-spark (#8873)
Bumps scala-maven-plugin from 4.8.0 to 4.8.1.

---
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- dependency-name: net.alchim31.maven:scala-maven-plugin
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2023-03-07 19:31:23 +08:00
amdsc21
c51a1c9aae rename hip.cc to hip 2023-03-07 05:39:53 +01:00
amdsc21
6039a71e6c add hip structure 2023-03-07 02:17:19 +01:00
dependabot[bot]
d62daa0b32
Bump maven-javadoc-plugin from 3.4.1 to 3.5.0 in /jvm-packages (#8814)
Bumps [maven-javadoc-plugin](https://github.com/apache/maven-javadoc-plugin) from 3.4.1 to 3.5.0.
- [Release notes](https://github.com/apache/maven-javadoc-plugin/releases)
- [Commits](https://github.com/apache/maven-javadoc-plugin/compare/maven-javadoc-plugin-3.4.1...maven-javadoc-plugin-3.5.0)

---
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- dependency-name: org.apache.maven.plugins:maven-javadoc-plugin
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2023-02-16 23:16:11 +08:00
Jiaming Yuan
c1786849e3
Use array interface for CSC matrix. (#8672)
* Use array interface for CSC matrix.

Use array interface for CSC matrix and align the interface with CSR and dense.

- Fix nthread issue in the R package DMatrix.
- Unify the behavior of handling `missing` with other inputs.
- Unify the behavior of handling `missing` around R, Python, Java, and Scala DMatrix.
- Expose `num_non_missing` to the JVM interface.
- Deprecate old CSR and CSC constructors.
2023-02-05 01:59:46 +08:00
dependabot[bot]
a9c6199723
Bump maven-project-info-reports-plugin in /jvm-packages (#8662)
Bumps [maven-project-info-reports-plugin](https://github.com/apache/maven-project-info-reports-plugin) from 3.4.1 to 3.4.2.
- [Release notes](https://github.com/apache/maven-project-info-reports-plugin/releases)
- [Commits](https://github.com/apache/maven-project-info-reports-plugin/compare/maven-project-info-reports-plugin-3.4.1...maven-project-info-reports-plugin-3.4.2)

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2023-01-16 04:57:28 +08:00
dependabot[bot]
37d4482e3e
Bump maven-checkstyle-plugin from 3.2.0 to 3.2.1 in /jvm-packages (#8661)
Bumps [maven-checkstyle-plugin](https://github.com/apache/maven-checkstyle-plugin) from 3.2.0 to 3.2.1.
- [Release notes](https://github.com/apache/maven-checkstyle-plugin/releases)
- [Commits](https://github.com/apache/maven-checkstyle-plugin/compare/maven-checkstyle-plugin-3.2.0...maven-checkstyle-plugin-3.2.1)

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2023-01-16 02:02:03 +08:00
Jiaming Yuan
badeff1d74
Init estimation for regression. (#8272) 2023-01-11 02:04:56 +08:00
Bobby Wang
4e12f3e1bc
[Breaking][jvm-packages] Bump rapids version to 22.12.0 (#8648)
* [jvm-packages] Bump rapids version to 22.12.0

This PR bumps spark version to 3.1.1 and the rapids version
to 22.12.0, which results in the latest xgboost can't run
with the old rapids packages.
2023-01-07 18:59:17 +08:00
Jiaming Yuan
6eaddaa9c3
[CI] Fix CI with updated dependencies. (#8631)
* [CI] Fix CI with updated dependencies.

- Fix jvm package get iris.

* Skip SHAP test for now.

* Revert "Skip SHAP test for now."

This reverts commit 9aa28b4d8aee53fa95d92d2a879c6783ff4b2faa.

* Catch all exceptions.
2023-01-03 21:04:04 -08:00
dependabot[bot]
20e6087579
Bump kryo from 5.3.0 to 5.4.0 in /jvm-packages (#8629)
Bumps [kryo](https://github.com/EsotericSoftware/kryo) from 5.3.0 to 5.4.0.
- [Release notes](https://github.com/EsotericSoftware/kryo/releases)
- [Commits](https://github.com/EsotericSoftware/kryo/compare/kryo-parent-5.3.0...kryo-parent-5.4.0)

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2023-01-03 18:44:39 +08:00
dependabot[bot]
0c38ca7f6e
Bump nexus-staging-maven-plugin from 1.6.7 to 1.6.13 in /jvm-packages (#8600) 2022-12-15 08:44:05 +00:00
dependabot[bot]
eac980fbfc
Bump maven-checkstyle-plugin from 3.1.2 to 3.2.0 in /jvm-packages (#8594)
Bumps [maven-checkstyle-plugin](https://github.com/apache/maven-checkstyle-plugin) from 3.1.2 to 3.2.0.
- [Release notes](https://github.com/apache/maven-checkstyle-plugin/releases)
- [Commits](https://github.com/apache/maven-checkstyle-plugin/compare/maven-checkstyle-plugin-3.1.2...maven-checkstyle-plugin-3.2.0)

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2022-12-14 19:46:03 +08:00
dependabot[bot]
f64871c74a
Bump spark.version from 3.0.1 to 3.0.3 in /jvm-packages (#8593)
Bumps `spark.version` from 3.0.1 to 3.0.3.

Updates `spark-mllib_2.12` from 3.0.1 to 3.0.3

Updates `spark-core_2.12` from 3.0.1 to 3.0.3

Updates `spark-sql_2.12` from 3.0.1 to 3.0.3

---
updated-dependencies:
- dependency-name: org.apache.spark:spark-mllib_2.12
  dependency-type: direct:production
  update-type: version-update:semver-patch
- dependency-name: org.apache.spark:spark-core_2.12
  dependency-type: direct:production
  update-type: version-update:semver-patch
- dependency-name: org.apache.spark:spark-sql_2.12
  dependency-type: direct:production
  update-type: version-update:semver-patch
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2022-12-14 17:23:48 +08:00
dependabot[bot]
5aeb8f7009
Bump maven-gpg-plugin from 1.5 to 3.0.1 in /jvm-packages (#8571) 2022-12-08 06:59:11 +00:00
dependabot[bot]
f592a5125b
Bump flink.version from 1.7.2 to 1.8.3 in /jvm-packages (#8561) 2022-12-07 20:53:22 +00:00
dependabot[bot]
27aea6c7b5
Bump maven-surefire-plugin from 2.19.1 to 2.22.2 in /jvm-packages (#8562) 2022-12-07 17:56:05 +00:00
dependabot[bot]
4f1e453ff5
Bump maven-project-info-reports-plugin in /jvm-packages (#8560)
Bumps [maven-project-info-reports-plugin](https://github.com/apache/maven-project-info-reports-plugin) from 2.2 to 3.4.1.
- [Release notes](https://github.com/apache/maven-project-info-reports-plugin/releases)
- [Commits](https://github.com/apache/maven-project-info-reports-plugin/compare/maven-project-info-reports-plugin-2.2...maven-project-info-reports-plugin-3.4.1)

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updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-project-info-reports-plugin
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