6918 Commits

Author SHA1 Message Date
dependabot[bot]
e20ed8ab9c
Bump org.sonatype.plugins:nexus-staging-maven-plugin (#10335)
Bumps org.sonatype.plugins:nexus-staging-maven-plugin from 1.6.13 to 1.7.0.

---
updated-dependencies:
- dependency-name: org.sonatype.plugins:nexus-staging-maven-plugin
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

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2024-05-28 19:08:40 +08:00
Jiaming Yuan
5627af6b21
[coll] Increase timeout limit. (#10332) 2024-05-28 10:20:49 +08:00
david-cortes
949f062229
[R] Fix incorrect division of classification/ranking objectives (#10327) 2024-05-27 10:27:32 +08:00
david-cortes
b2008773bb
[R] Update docs for custom user functions (#10328) 2024-05-27 10:26:34 +08:00
Dmitry Razdoburdin
0058301e6f
[sycl] optimise hist building (#10311)
Co-authored-by: Dmitry Razdoburdin <>
2024-05-27 10:21:22 +08:00
Bobby Wang
9def441e9a
[CI] add script to generate meta info and upload to s3 (#10295)
* [CI] add script to generate meta info and upload to s3

* Write Python script to generate meta.json

* Update other pipelines

* Add wheel_name field

* Add description

---------

Co-authored-by: Hyunsu Cho <phcho@nvidia.com>
2024-05-24 10:03:28 -07:00
david-cortes
5086decb0c
[R] Reshape predictions for custom eval metric when they are 2D (#10323) 2024-05-24 17:28:30 +08:00
dependabot[bot]
95ba0998b3
Bump org.codehaus.mojo:exec-maven-plugin from 3.2.0 to 3.3.0 in /jvm-packages/xgboost4j (#10309)
updated-dependencies:
- dependency-name: org.codehaus.mojo:exec-maven-plugin
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

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2024-05-23 18:11:25 +08:00
dependabot[bot]
089bee0a00
Bump org.apache.maven.plugins:maven-deploy-plugin (#10240)
Bumps [org.apache.maven.plugins:maven-deploy-plugin](https://github.com/apache/maven-deploy-plugin) from 3.1.1 to 3.1.2.
- [Release notes](https://github.com/apache/maven-deploy-plugin/releases)
- [Commits](https://github.com/apache/maven-deploy-plugin/compare/maven-deploy-plugin-3.1.1...maven-deploy-plugin-3.1.2)

---
updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-deploy-plugin
  dependency-type: direct:production
  update-type: version-update:semver-patch
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2024-05-23 17:55:49 +08:00
dependabot[bot]
5a084fb9b3
Bump org.apache.maven.plugins:maven-jar-plugin in /jvm-packages (#10244)
Bumps [org.apache.maven.plugins:maven-jar-plugin](https://github.com/apache/maven-jar-plugin) from 3.4.0 to 3.4.1.
- [Release notes](https://github.com/apache/maven-jar-plugin/releases)
- [Commits](https://github.com/apache/maven-jar-plugin/compare/maven-jar-plugin-3.4.0...maven-jar-plugin-3.4.1)

---
updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-jar-plugin
  dependency-type: direct:production
  update-type: version-update:semver-patch
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2024-05-23 17:06:44 +08:00
dependabot[bot]
291d417f57
Bump net.alchim31.maven:scala-maven-plugin in /jvm-packages/xgboost4j (#10260)
Bumps net.alchim31.maven:scala-maven-plugin from 4.9.0 to 4.9.1.

---
updated-dependencies:
- dependency-name: net.alchim31.maven:scala-maven-plugin
  dependency-type: direct:production
  update-type: version-update:semver-patch
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2024-05-23 14:40:37 +08:00
Jiaming Yuan
15eb553c1f
[doc] Add a coarse map for XGBoost features to assist development. [skip ci] (#10310) 2024-05-23 14:25:15 +08:00
Bobby Wang
932d7201f9
[jvm-packages] refine tracker (#10313)
Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
2024-05-23 12:46:21 +08:00
Jiaming Yuan
966dc81788
[coll] Keep the tracker alive during initialization error. (#10306) 2024-05-23 11:13:59 +08:00
Jiaming Yuan
d5fcbee44b
Add timeout for distributed tests. (#10315) 2024-05-23 11:11:49 +08:00
dependabot[bot]
b8a7773736
Bump org.apache.maven.plugins:maven-deploy-plugin (#10235)
Bumps [org.apache.maven.plugins:maven-deploy-plugin](https://github.com/apache/maven-deploy-plugin) from 3.1.1 to 3.1.2.
- [Release notes](https://github.com/apache/maven-deploy-plugin/releases)
- [Commits](https://github.com/apache/maven-deploy-plugin/compare/maven-deploy-plugin-3.1.1...maven-deploy-plugin-3.1.2)

---
updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-deploy-plugin
  dependency-type: direct:production
  update-type: version-update:semver-patch
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2024-05-22 18:53:30 +08:00
dependabot[bot]
e56ca69c31
Bump dorny/paths-filter from 2 to 3 (#10276)
Bumps [dorny/paths-filter](https://github.com/dorny/paths-filter) from 2 to 3.
- [Release notes](https://github.com/dorny/paths-filter/releases)
- [Changelog](https://github.com/dorny/paths-filter/blob/master/CHANGELOG.md)
- [Commits](https://github.com/dorny/paths-filter/compare/v2...v3)

---
updated-dependencies:
- dependency-name: dorny/paths-filter
  dependency-type: direct:production
  update-type: version-update:semver-major
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2024-05-22 17:14:21 +08:00
Jiaming Yuan
1b25d23583
[JVM-packages] Prevent memory leak. (#10307) 2024-05-22 13:47:59 +08:00
dependabot[bot]
6a43a4b9d3
Bump mamba-org/provision-with-micromamba from 14 to 16 (#10275)
Bumps [mamba-org/provision-with-micromamba](https://github.com/mamba-org/provision-with-micromamba) from 14 to 16.
- [Release notes](https://github.com/mamba-org/provision-with-micromamba/releases)
- [Commits](f347426e57...3c96c0c276)

---
updated-dependencies:
- dependency-name: mamba-org/provision-with-micromamba
  dependency-type: direct:production
  update-type: version-update:semver-major
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2024-05-21 18:39:35 -07:00
Dmitry Razdoburdin
c7e7ce7569
[SYCL] Add nodes initialisation (#10269)
---------

Co-authored-by: Dmitry Razdoburdin <>
Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
2024-05-21 23:38:52 +08:00
Jiaming Yuan
7a54ca41c9
[CI] Bump checkout action version. (#10305) 2024-05-21 16:38:20 +08:00
dependabot[bot]
d66b5570f4
Bump commons-logging:commons-logging in /jvm-packages/xgboost4j (#10294)
Bumps commons-logging:commons-logging from 1.3.1 to 1.3.2.

---
updated-dependencies:
- dependency-name: commons-logging:commons-logging
  dependency-type: direct:production
  update-type: version-update:semver-patch
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2024-05-21 15:49:26 +08:00
dependabot[bot]
841867e05a
Bump actions/checkout from 2 to 4 (#10274)
Bumps [actions/checkout](https://github.com/actions/checkout) from 2 to 4.
- [Release notes](https://github.com/actions/checkout/releases)
- [Commits](https://github.com/actions/checkout/compare/v2...v4)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-type: direct:production
  update-type: version-update:semver-major
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2024-05-21 13:18:03 +08:00
dependabot[bot]
e7f8f40240
Bump ossf/scorecard-action from 2.3.1 to 2.3.3 (#10280)
Bumps [ossf/scorecard-action](https://github.com/ossf/scorecard-action) from 2.3.1 to 2.3.3.
- [Release notes](https://github.com/ossf/scorecard-action/releases)
- [Changelog](https://github.com/ossf/scorecard-action/blob/main/RELEASE.md)
- [Commits](0864cf1902...dc50aa9510)

---
updated-dependencies:
- dependency-name: ossf/scorecard-action
  dependency-type: direct:production
  update-type: version-update:semver-patch
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2024-05-21 11:56:56 +08:00
dependabot[bot]
d5c9ef64a5
Bump conda-incubator/setup-miniconda from 2.1.1 to 3.0.4 (#10278)
Bumps [conda-incubator/setup-miniconda](https://github.com/conda-incubator/setup-miniconda) from 2.1.1 to 3.0.4.
- [Release notes](https://github.com/conda-incubator/setup-miniconda/releases)
- [Commits](https://github.com/conda-incubator/setup-miniconda/compare/v2.1.1...v3.0.4)

---
updated-dependencies:
- dependency-name: conda-incubator/setup-miniconda
  dependency-type: direct:production
  update-type: version-update:semver-major
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2024-05-21 10:15:00 +08:00
Jiaming Yuan
a5a58102e5
Revamp the rabit implementation. (#10112)
This PR replaces the original RABIT implementation with a new one, which has already been partially merged into XGBoost. The new one features:
- Federated learning for both CPU and GPU.
- NCCL.
- More data types.
- A unified interface for all the underlying implementations.
- Improved timeout handling for both tracker and workers.
- Exhausted tests with metrics (fixed a couple of bugs along the way).
- A reusable tracker for Python and JVM packages.
2024-05-20 11:56:23 +08:00
Jiaming Yuan
ba9b4cb1ee
Fix pylint. (#10296) 2024-05-17 13:28:39 +08:00
Jiaming Yuan
835e59e538
Use a thread pool for external memory. (#10288) 2024-05-16 19:32:12 +08:00
Philip Hyunsu Cho
ee2afb3256
Adopt new logo (#10270) 2024-05-14 12:58:50 -07:00
Jiaming Yuan
ca1d04bcb7
Release data in cache. (#10286) 2024-05-14 14:20:19 +08:00
Jiaming Yuan
f1f69ff10e
[CI] Fixes for using the latest modin. (#10285) 2024-05-14 12:13:35 +08:00
Jiaming Yuan
871fabeee3
[doc][dask] Update notes about k8s. (#10271) 2024-05-14 04:21:02 +08:00
Christian Clauss
75fe2ff0c3
Keep GitHub Actions up to date with Dependabot (#10268)
# Fixes software supply chain safety warnings like at the bottom right of
https://github.com/dmlc/xgboost/actions/runs/9048469681

* [Keeping your actions up to date with Dependabot](https://docs.github.com/en/code-security/dependabot/working-with-dependabot/keeping-your-actions-up-to-date-with-dependabot)
* [Configuration options for the dependabot.yml file - package-ecosystem](https://docs.github.com/en/code-security/dependabot/dependabot-version-updates/configuration-options-for-the-dependabot.yml-file#package-ecosystem)
2024-05-13 01:57:13 -07:00
Jiaming Yuan
d81e319e78
Fixes for the latest pandas. (#10266)
Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
2024-05-12 11:15:46 +08:00
Jiaming Yuan
5e816e616a
[CI] Upgrade setup-r. (#10267) 2024-05-12 05:25:29 +08:00
Jiaming Yuan
5de57435c7
Be more lenient on floating point error for AUC. (#10264) 2024-05-11 08:48:11 +08:00
Dmitry Razdoburdin
f588252481
[sycl] add loss guided hist building (#10251)
Co-authored-by: Dmitry Razdoburdin <>
2024-05-10 22:35:13 +08:00
Bobby Wang
9b465052ce
[jvm-packages] fix group col for gpu packages (#10254) 2024-05-09 07:44:07 +08:00
Jiaming Yuan
8237920c48
[jvm-packagaes] Freeze spark to 3.4.1 for now. (#10253)
The newer spark version for CPU conflicts with the more conservative version used by
rapids.
2024-05-07 09:00:59 -07:00
Jiaming Yuan
73afef1a6e
Fixes for numpy 2.0. (#10252) 2024-05-07 03:54:32 +08:00
Dmitry Razdoburdin
dcc9639b91
[sycl] add data initialisation for training (#10222)
Co-authored-by: Dmitry Razdoburdin <>
Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
2024-05-05 12:07:10 +08:00
Jiaming Yuan
5e64276a9b
Update nvtx. (#10227) 2024-04-29 06:33:46 +08:00
Jiaming Yuan
837d44a345
Support more sklearn tags for testing. (#10230) 2024-04-29 06:33:23 +08:00
dependabot[bot]
f8c3d22587
Bump org.apache.spark:spark-mllib_2.12 (#10070)
Bumps org.apache.spark:spark-mllib_2.12 from 3.4.1 to 3.5.1.

---
updated-dependencies:
- dependency-name: org.apache.spark:spark-mllib_2.12
  dependency-type: direct:production
  update-type: version-update:semver-minor
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2024-04-28 15:02:14 -07:00
Jiaming Yuan
54754f29dd
[pyspark] Sort workers by task ID. (#10220) 2024-04-28 18:05:15 +08:00
dependabot[bot]
f355418186
Bump org.apache.maven.plugins:maven-gpg-plugin (#10211)
Bumps [org.apache.maven.plugins:maven-gpg-plugin](https://github.com/apache/maven-gpg-plugin) from 3.2.3 to 3.2.4.
- [Release notes](https://github.com/apache/maven-gpg-plugin/releases)
- [Commits](https://github.com/apache/maven-gpg-plugin/compare/maven-gpg-plugin-3.2.3...maven-gpg-plugin-3.2.4)

---
updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-gpg-plugin
  dependency-type: direct:production
  update-type: version-update:semver-patch
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2024-04-26 12:35:48 -07:00
dependabot[bot]
4d69ce96b3
Bump org.apache.maven.plugins:maven-jar-plugin (#10210)
Bumps [org.apache.maven.plugins:maven-jar-plugin](https://github.com/apache/maven-jar-plugin) from 3.4.0 to 3.4.1.
- [Release notes](https://github.com/apache/maven-jar-plugin/releases)
- [Commits](https://github.com/apache/maven-jar-plugin/compare/maven-jar-plugin-3.4.0...maven-jar-plugin-3.4.1)

---
updated-dependencies:
- dependency-name: org.apache.maven.plugins:maven-jar-plugin
  dependency-type: direct:production
  update-type: version-update:semver-patch
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2024-04-26 12:35:34 -07:00
dependabot[bot]
a5003fc8ce
Bump net.alchim31.maven:scala-maven-plugin in /jvm-packages/xgboost4j (#10217)
Bumps net.alchim31.maven:scala-maven-plugin from 4.8.1 to 4.9.0.

---
updated-dependencies:
- dependency-name: net.alchim31.maven:scala-maven-plugin
  dependency-type: direct:production
  update-type: version-update:semver-minor
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2024-04-26 12:35:20 -07:00
dependabot[bot]
8ed85b8ce7
Bump hadoop.version from 3.3.6 to 3.4.0 in /jvm-packages/xgboost4j (#10156)
Bumps `hadoop.version` from 3.3.6 to 3.4.0.

Updates `org.apache.hadoop:hadoop-hdfs` from 3.3.6 to 3.4.0

Updates `org.apache.hadoop:hadoop-common` from 3.3.6 to 3.4.0

---
updated-dependencies:
- dependency-name: org.apache.hadoop:hadoop-hdfs
  dependency-type: direct:production
  update-type: version-update:semver-minor
- dependency-name: org.apache.hadoop:hadoop-common
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

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2024-04-26 11:15:03 -07:00
Philip Hyunsu Cho
edb945d59b
[CI] Use native arm64 worker in GHAction to build M1 wheel (#10225)
* [CI] Use native arm64 worker in GHAction to build M1 wheel

* Set up Conda

* Use mamba

* debug

* fix

* fix

* fix

* fix

* fix

* Temporarily disable other tests

* Fix prefix

* Use micromamba

* Use conda-incubator/setup-miniconda

* Use mambaforge

* Fix

* Fix prefix

* Don't use deprecated set-output

* Add verbose output from build

* verbose

* Specify arch

* Bump setup-miniconda to v3

* Use Python 3.9

* Restore deleted files

* WAR.

---------

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
2024-04-26 10:16:55 -07:00