134 Commits

Author SHA1 Message Date
Jiaming Yuan
9b88495840
[multi] Implement weight feature importance. (#10700) 2024-08-22 02:06:47 +08:00
Jiaming Yuan
3d8107adb8
Support doc link for the sklearn module. (#10287) 2024-08-06 02:35:32 +08:00
Jiaming Yuan
a5a58102e5
Revamp the rabit implementation. (#10112)
This PR replaces the original RABIT implementation with a new one, which has already been partially merged into XGBoost. The new one features:
- Federated learning for both CPU and GPU.
- NCCL.
- More data types.
- A unified interface for all the underlying implementations.
- Improved timeout handling for both tracker and workers.
- Exhausted tests with metrics (fixed a couple of bugs along the way).
- A reusable tracker for Python and JVM packages.
2024-05-20 11:56:23 +08:00
Jiaming Yuan
73afef1a6e
Fixes for numpy 2.0. (#10252) 2024-05-07 03:54:32 +08:00
Jiaming Yuan
837d44a345
Support more sklearn tags for testing. (#10230) 2024-04-29 06:33:23 +08:00
Jiaming Yuan
8ea705e4d5
Support sample weight in sklearn custom objective. (#10050) 2024-02-21 00:43:14 +08:00
Jiaming Yuan
69a17d5114
Fix with None input. (#10052) 2024-02-20 22:34:22 +08:00
Jiaming Yuan
65d7bf2dfe
Handle np integer in model slice and prediction. (#10007) 2024-01-26 04:58:48 +08:00
Jiaming Yuan
0798e36d73
[breaking] Remove deprecated parameters in the skl interface. (#9986) 2024-01-15 20:40:05 +08:00
Jiaming Yuan
38dd91f491
Save model in ubj as the default. (#9947) 2024-01-05 17:53:36 +08:00
Jiaming Yuan
5f7b5a6921
Add tests for pickling with custom obj and metric. (#9943) 2024-01-04 14:52:48 +08:00
Jiaming Yuan
e9f149481e
[sklearn] Fix loading model attributes. (#9808) 2023-11-27 17:19:01 +08:00
Jiaming Yuan
c3a0622b49
Fix using categorical data with the score function of ranker. (#9753) 2023-11-07 07:29:11 +08:00
david-cortes
be20df8c23
[Python] Accept numpy generators as random_state (#9743)
* accept numpy generators for random_state

* make linter happy

* fix tests
2023-11-01 16:20:44 -07:00
Jiaming Yuan
7f29a238e6
Return base score as intercept. (#9486) 2023-08-19 12:28:02 +08:00
Jiaming Yuan
801116c307
Test scikit-learn model IO with gblinear. (#9459) 2023-08-13 23:41:49 +08:00
Jiaming Yuan
16eb41936d
Handle the new device parameter in dask and demos. (#9386)
* Handle the new `device` parameter in dask and demos.

- Check no ordinal is specified in the dask interface.
- Update demos.
- Update dask doc.
- Update the condition for QDM.
2023-07-15 19:11:20 +08:00
Jiaming Yuan
9da5050643
Turn warning messages into Python warnings. (#9387) 2023-07-15 07:46:43 +08:00
Jiaming Yuan
e964654b8f
[skl] Enable cat feature without specifying tree method. (#9353) 2023-07-03 22:06:17 +08:00
Jiaming Yuan
39390cc2ee
[breaking] Remove the predictor param, allow fallback to prediction using DMatrix. (#9129)
- A `DeviceOrd` struct is implemented to indicate the device. It will eventually replace the `gpu_id` parameter.
- The `predictor` parameter is removed.
- Fallback to `DMatrix` when `inplace_predict` is not available.
- The heuristic for choosing a predictor is only used during training.
2023-07-03 19:23:54 +08:00
Jiaming Yuan
f4798718c7
Use hist as the default tree method. (#9320) 2023-06-27 23:04:24 +08:00
Jiaming Yuan
1fcc26a6f8
Set ndcg to default for LTR. (#8822)
- Add document.
- Add tests.
- Use `ndcg` with `topk` as default.
2023-06-09 23:31:33 +08:00
Jiaming Yuan
e206b899ef
Rework MAP and Pairwise for LTR. (#9075) 2023-04-28 02:39:12 +08:00
Jiaming Yuan
bac22734fb
Remove ntree limit in python package. (#8345)
- Remove `ntree_limit`. The parameter has been deprecated since 1.4.0.
- The SHAP package compatibility is broken.
2023-03-31 19:01:55 +08:00
Jiaming Yuan
c2b3a13e70
[breaking][skl] Remove parameter serialization. (#8963)
- Remove parameter serialization in the scikit-learn interface.

The scikit-lear interface `save_model` will save only the model and discard all
hyper-parameters. This is to align with the native XGBoost interface, which distinguishes
the hyper-parameter and model parameters.

With the scikit-learn interface, model parameters are attributes of the estimator. For
instance, `n_features_in_`, `n_classes_` are always accessible with
`estimator.n_features_in_` and `estimator.n_classes_`, but not with the
`estimator.get_params`.

- Define a `load_model` method for classifier to load its own attributes.

- Set n_estimators to None by default.
2023-03-27 21:34:10 +08:00
Jiaming Yuan
5891f752c8
Rework the MAP metric. (#8931)
- The new implementation is more strict as only binary labels are accepted. The previous implementation converts values greater than 1 to 1.
- Deterministic GPU. (no atomic add).
- Fix top-k handling.
- Precise definition of MAP. (There are other variants on how to handle top-k).
- Refactor GPU ranking tests.
2023-03-22 17:45:20 +08:00
Jiaming Yuan
7eba285a1e
Support sklearn cross validation for ranker. (#8859)
* Support sklearn cross validation for ranker.

- Add a convention for X to include a special `qid` column.

sklearn utilities consider only `X`, `y` and `sample_weight` for supervised learning
algorithms, but we need an additional qid array for ranking.

It's important to be able to support the cross validation function in sklearn since all
other tuning functions like grid search are based on cross validation.
2023-03-07 00:22:08 +08:00
Jiaming Yuan
228a46e8ad
Support learning rate for zero-hessian objectives. (#8866) 2023-03-06 20:33:28 +08:00
Jiaming Yuan
6a892ce281
Specify src path for isort. (#8867) 2023-03-06 17:30:27 +08:00
Jiaming Yuan
225b3158f6
Support custom metric in sklearn ranker. (#8786) 2023-02-12 13:14:07 +08:00
BenEfrati
213b5602d9
Add sample_weight to eval_metric (#8706) 2023-02-05 00:06:38 +08:00
Jiaming Yuan
badeff1d74
Init estimation for regression. (#8272) 2023-01-11 02:04:56 +08:00
Jiaming Yuan
1b58d81315
[doc] Document Python inputs. (#8643) 2023-01-10 15:39:32 +08:00
Jiaming Yuan
e68a152d9e
Do not return internal value for get_params. (#8634) 2023-01-05 17:48:26 +08:00
Rong Ou
42e6fbb0db
Fix sklearn test that calls a removed field (#8579) 2022-12-09 13:06:44 -08:00
Jiaming Yuan
cfd2a9f872
Extract dask and spark test into distributed test. (#8395)
- Move test files.
- Run spark and dask separately to prevent conflicts.
- Gather common code into the testing module.
2022-10-28 16:24:32 +08:00
Jiaming Yuan
cf70864fa3
Move Python testing utilities into xgboost module. (#8379)
- Add typehints.
- Fixes for pylint.

Co-authored-by: Hyunsu Philip Cho <chohyu01@cs.washington.edu>
2022-10-26 16:56:11 +08:00
Jiaming Yuan
c884b9e888
Validate features for inplace predict. (#8359) 2022-10-19 23:05:36 +08:00
Jiaming Yuan
2176e511fc
Disable pytest-timeout for now. (#8348) 2022-10-17 23:06:10 +08:00
Rory Mitchell
ce0382dcb0
[CI] Refactor tests to reduce CI time. (#8312) 2022-10-12 11:32:06 +02:00
Jiaming Yuan
c70fa502a5
Expose feature_types to sklearn interface. (#7821) 2022-04-21 20:23:35 +08:00
Jiaming Yuan
52d4eda786
Deprecate use_label_encoder in XGBClassifier. (#7822)
* Deprecate `use_label_encoder` in XGBClassifier.

* We have removed the encoder, now prepare to remove the indicator.
2022-04-21 13:14:02 +08:00
Jiaming Yuan
3c9b04460a
Move num_parallel_tree to model parameter. (#7751)
The size of forest should be a property of model itself instead of a training
hyper-parameter.
2022-03-29 02:32:42 +08:00
Philip Hyunsu Cho
c621775f34
Replace all uses of deprecated function sklearn.datasets.load_boston (#7373)
* Replace all uses of deprecated function sklearn.datasets.load_boston

* More renaming

* Fix bad name

* Update assertion

* Fix n boosted rounds.

* Avoid over regularization.

* Rebase.

* Avoid over regularization.

* Whac-a-mole

Co-authored-by: fis <jm.yuan@outlook.com>
2022-01-30 04:27:57 -08:00
Philip Hyunsu Cho
b4340abf56
Add special handling for multi:softmax in sklearn predict (#7607)
* Add special handling for multi:softmax in sklearn predict

* Add test coverage
2022-01-29 15:54:49 -08:00
Jiaming Yuan
001503186c
Rewrite approx (#7214)
This PR rewrites the approx tree method to use codebase from hist for better performance and code sharing.

The rewrite has many benefits:
- Support for both `max_leaves` and `max_depth`.
- Support for `grow_policy`.
- Support for mono constraint.
- Support for feature weights.
- Support for easier bin configuration (`max_bin`).
- Support for categorical data.
- Faster performance for most of the datasets. (many times faster)
- Support for prediction cache.
- Significantly better performance for external memory.
- Unites the code base between approx and hist.
2022-01-10 21:15:05 +08:00
Jiaming Yuan
eb1efb54b5
Define feature_names_in_. (#7526)
* Define `feature_names_in_`.
* Raise attribute error if it's not defined.
2022-01-05 01:35:34 +08:00
Jiaming Yuan
8f0a42a266
Initial support for multi-label classification. (#7521)
* Add support in sklearn classifier.
2022-01-04 23:58:21 +08:00
Jiaming Yuan
58a6723eb1
Initial support for multioutput regression. (#7514)
* Add num target model parameter, which is configured from input labels.
* Change elementwise metric and indexing for weights.
* Add demo.
* Add tests.
2021-12-18 09:28:38 +08:00
Jiaming Yuan
8cc75f1576
Cleanup Python tests. (#7426) 2021-11-14 15:47:05 +08:00