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153 Commits

Author SHA1 Message Date
Jiaming Yuan
718472dbe2
[CI] Upgrade GitHub action Windows workers. (#7739) 2022-03-20 01:44:33 +08:00
Jiaming Yuan
1441a6cd27
[CI] Update R cache. (#7646) 2022-02-11 19:50:11 +08:00
Philip Hyunsu Cho
34a238ca98
[CI] Clean up Python wheel build pipeline (#7626) 
* [CI] Always upload artifacts to [branch_name]/

* [CI] Move detailed setup inside build_python_wheels.sh

* Fix typo
 2022-02-03 00:55:44 -08:00
Philip Hyunsu Cho
f6e6d0b2c0
[CI] Build Python wheels for MacOS (x86_64 and arm64) (#7621) 
* Build Python wheels for OSX (x86_64 and arm64)

* Use Conda's libomp when running Python tests

* fix

* Add comment to explain CIBW_TARGET_OSX_ARM64

* Update release script

* Add comments in build_python_wheels.sh

* Document wheel pipeline
 2022-02-02 17:35:48 -08:00
Philip Hyunsu Cho
619c450a49
[CI] Add missing step extract_branch (#7479) 2021-11-24 17:35:59 +08:00
Jiaming Yuan
820e1c01ef
Fix macos package upload. (#7475) 
* Split up the tests.
 2021-11-24 03:43:49 +08:00
Jiaming Yuan
488f12a996
Fix github macos package upload. (#7474) 2021-11-24 00:29:11 +08:00
Philip Hyunsu Cho
96a9848c9e
[CI] Fix continuous delivery pipeline for MacOS (#7472) 2021-11-23 22:22:08 +08:00
Jiaming Yuan
38ca96c9fc
[CI] Install igraph as binary. (#7417) 2021-11-12 19:04:28 +08:00
Jiaming Yuan
239dbb3c0a
Move macos test to github action. (#7382) 
Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2021-10-30 14:40:32 +08:00
Philip Hyunsu Cho
336af4f974
Work around a segfault observed in SparsePage::Push() (#7161) 
* Work around a segfault observed in SparsePage::Push()

* Revert "Work around a segfault observed in SparsePage::Push()"

This reverts commit 30934844d00908750a5442082eb4769b1489f6a9.

* Don't call vector::resize() inside OpenMP block

* Set GITHUB_PAT env var to fix R tests

* Use built-in GITHUB_TOKEN
 2021-08-08 02:12:30 -07:00
Jiaming Yuan
e6088366df
Export Python Interface for external memory. (#7070) 
* Add Python iterator interface.
* Add tests.
* Add demo.
* Add documents.
* Handle empty dataset.
 2021-07-22 15:15:53 +08:00
Philip Hyunsu Cho
2801d69fb7
[CI] Pin libomp to 11.1.0 (#7107) 2021-07-15 11:16:51 +08:00
Jiaming Yuan
8e8232fb4c
[CI] Update R cache. (#7102) 2021-07-14 03:15:35 +08:00
Jiaming Yuan
345796825f
Optional find dependency in installed cmake config. (#7099) 
* Find dependency only when xgboost is built as static library.
* Resolve msvc warning.
* Add test for linking shared library.
 2021-07-11 17:20:55 +08:00
Jiaming Yuan
f937f514aa
Remove lz4 compression with external memory. (#7076) 2021-07-06 14:46:43 +08:00
Jiaming Yuan
29d6a5e2b8
[CI] Move appveyor tests to action (#6986) 
* Drop support for VS14, use VS15 instead.
* Drop support for mingw.
* Remove debug build.
* Split up jvm tests.
* Split up Python tests.
 2021-05-27 04:49:45 +08:00
Jiaming Yuan
a4bc7ecf27
Restore R cache on github action. (#6985) 2021-05-25 18:53:44 +08:00
James Lamb
894e9bc5d4
[R-package] remove dependency on {magrittr} (#6928) 
Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2021-05-13 04:34:59 +08:00
Jiaming Yuan
db6285fb55
[CI] Skip external memory gtest on osx. (#6901) 2021-04-30 08:59:33 +08:00
Jiaming Yuan
74b41637de
Revert "[jvm-packages] Add XGBOOST_RABIT_TRACKER_IP_FOR_TEST to set rabit tracker IP. (#6869)" (#6886) 
This reverts commit 2828da3c4c951baa45d1bb6f85c7b3a6657cd607.
 2021-04-21 11:20:10 -07:00
Bobby Wang
2828da3c4c
[jvm-packages] Add XGBOOST_RABIT_TRACKER_IP_FOR_TEST to set rabit tracker IP. (#6869) 
* Add `XGBOOST_RABIT_TRACKER_IP_FOR_TEST` to set rabit tracker IP

* change spark and rabit tracker IP to 127.0.0.1on GitHub Action.

Co-authored-by: fis <jm.yuan@outlook.com>
 2021-04-22 02:00:22 +08:00
Jiaming Yuan
bccb7e87d1
Update dmlc-core. (#6862) 
* Install pandoc, pandoc-citeproc on CI.
 2021-04-16 00:14:17 +08:00
Philip Hyunsu Cho
878b990fcd
[CI] Upload Doxygen to correct destination (#6854) 2021-04-13 16:18:13 -07:00
Jiaming Yuan
dee5ef2dfd
Typehint for Sklearn. (#6799) 2021-04-14 06:55:21 +08:00
Philip Hyunsu Cho
744c46995c
[CI] Upload xgboost4j.dll to S3 (#6781) 2021-03-25 11:34:34 -07:00
Philip Hyunsu Cho
5ae7f9944b
[CI] Clear R package cache (#6746) 2021-03-06 08:37:16 -08:00
Jiaming Yuan
dbf7e9d3cb
Remove R cache in github action. (#6695) 
The cache stores outdated packages with wrong linkage.  Right now there's no way to clear the cache.
 2021-02-09 18:53:20 +08:00
Jiaming Yuan
d19a0ddacf
Move sdist test to action. (#6635) 
* Move x86 linux and osx sdist test to action.

* Add Windows.
 2021-01-26 08:25:59 +08:00
Jiaming Yuan
f8bb678c67
Exclude dmlc test on github action. (#6625) 2021-01-20 18:50:20 +08:00
Jiaming Yuan
96d3d32265
[dask] Add shap tests. (#6575) 2021-01-08 14:59:27 +08:00
Jiaming Yuan
de8fd852a5
[dask] Add type hints. (#6519) 
* Add validate_features.
* Show type hints in doc.

Co-authored-by: Hyunsu Cho <chohyu01@cs.washington.edu>
 2020-12-29 19:41:02 +08:00
Jiaming Yuan
d8d684538c
[CI] Split up main.yml, add mypy. (#6515) 2020-12-17 00:15:44 +08:00
Philip Hyunsu Cho
5a33c2f3a0
[CI] Add noLD R test (#6382) 
* [CI] Add noLD test

* Make noLD test only trigger with a PR comment

* [CI] Don't install stringi

* Add the Titanic example as a unit test

* Document trigger

* add to index

* Clarify that it needs to be a review comment
 2020-11-12 12:41:25 -08:00
Philip Hyunsu Cho
7f101d1b33
[CI] Remove R check from Jenkins (#6372) 
* Remove R check from Jenkins

* Print stacktrace when CRAN test fail in GitHub Actions

* Add verbose flag in tests/ci_build/print_r_stacktrace.sh

* Fix path in tests/ci_build/print_r_stacktrace.sh
 2020-11-10 22:46:54 -08:00
Jiaming Yuan
a5cfa7841e
Run R check as cran on action. [skip ci] (#6371) 
Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2020-11-11 12:02:53 +08:00
Yuan Tang
cdcdab98b8
Add sponsors link to FUNDING.yml (#6252) 2020-10-18 19:17:11 -07:00
Jiaming Yuan
4cfdcaaf7b
Move non-OpenMP gtest to GitHub Actions (#6210) 2020-10-08 00:58:21 -07:00
Philip Hyunsu Cho
2c4dedb7a0
[CI] Test C API demo (#6159) 
* Fix CMake install config to use dependencies

* [CI] Test C API demo

* Explicitly cast num_feature, to avoid warning in Linux
 2020-09-25 14:49:01 -07:00
Jiaming Yuan
c92d751ad1
Enable building rabit on Windows (#6105) 2020-09-11 11:54:46 +08:00
Philip Hyunsu Cho
d0ccb13d09
Work around a compiler bug in MacOS AppleClang 11 (#6103) 
* Workaround a compiler bug in MacOS AppleClang

* [CI] Run C++ test with MacOS Catalina + AppleClang 11.0.3

* [CI] Migrate cmake_test on MacOS from Travis CI to GitHub Actions

* Install OpenMP runtime

* [CI] Use CMake to locate lz4 lib
 2020-09-09 21:21:55 -07:00
Tong He
3912f3de06
Updates from 1.2.0 cran submission (#6077) 
* update for 1.2.0 cran submission

* recover cmakelists

* fix unittest from the shap PR

* trigger CI
 2020-09-02 20:50:23 +08:00
Philip Hyunsu Cho
9c14e430af
[CI] Improve JVM test in GitHub Actions (#5930) 
* [CI] Improve JVM test in GitHub Actions

* Use env var for Wagon options [skip ci]

* Move the retry flag to pom.xml [skip ci]

* Export env var RABIT_MOCK to run Spark tests [skip ci]

* Correct location of env var

* Re-try up to 5 times [skip ci]

* Don't run distributed training test on Windows

* Fix typo

* Update main.yml
 2020-08-25 10:14:46 -07:00
Jiaming Yuan
7a46515d3d
Remove win2016 jvm github action test. (#6042) 2020-08-20 19:39:46 -07:00
Philip Hyunsu Cho
1fd29edf66
[CI] Migrate linters to GitHub Actions (#6035) 
* [CI] Move lint to GitHub Actions

* [CI] Move Doxygen to GitHub Actions

* [CI] Move Sphinx build test to GitHub Actions

* [CI] Reduce workload for Windows R tests

* [CI] Move clang-tidy to Build stage
 2020-08-19 12:33:51 -07:00
Philip Hyunsu Cho
5879acde9a
[CI] Improve R linter script (#5944) 
* [CI] Move lint to a separate script

* [CI] Improved lintr launcher

* Add lintr as a separate action

* Add custom parsing logic to print out logs

* Fix lintr issues in demos

* Run R demos

* Fix CRAN checks

* Install XGBoost into R env before running lintr

* Install devtools (needed to run demos)
 2020-07-27 00:55:35 -07:00
Jiaming Yuan
fbfbd525d8
Cache dependencies on Github Action. (#5928) 2020-07-23 14:00:19 +08:00
Jiaming Yuan
66cc1e02aa
Setup github action. (#5917) 2020-07-22 15:05:25 +08:00
Jiaming Yuan
03fb98fbde
Fix typo in CI. [skip ci] (#5919) 2020-07-21 14:25:27 +08:00
Jiaming Yuan
8b1afce316
Add Github Action for R. (#5911) 
* Fix lintr errors.
 2020-07-20 19:23:36 +08:00