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1556 Commits

Author SHA1 Message Date
Jiaming Yuan
00264eb72b
[EM] Basic distributed test for external memory. (#10492) 2024-07-06 01:15:20 +08:00
Jiaming Yuan
620b2b155a
Cache GPU histogram kernel configuration. (#10538) 2024-07-04 15:38:59 +08:00
Jiaming Yuan
628411a654
Enhance the threadpool implementation. (#10531) 
- Accept an initialization function.
- Support void return tasks.
 2024-07-03 12:13:27 +08:00
Jiaming Yuan
9cb4c938da
[EM] Move prefetch in reset into the end of the iteration. (#10529) 2024-07-03 03:48:18 +08:00
Jiaming Yuan
a39fef2c67
[fed] Fixes for the encrypted GRPC backend. (#10503) 2024-07-02 15:15:12 +08:00
Philip Hyunsu Cho
09d32f1f2b
Fix build and C++ tests for FreeBSD (#10480) 2024-06-28 01:47:55 -07:00
Jiaming Yuan
e8a962575a
[EM] Allow staging ellpack on host for GPU external memory. (#10488) 
- New parameter `on_host`.
- Abstract format creation and stream creation into policy classes.
 2024-06-28 04:42:18 +08:00
Jiaming Yuan
824fba783e
Remove support for deprecated format in Python. (#10490) 2024-06-27 11:31:53 +08:00
Philip Hyunsu Cho
4b88dfff24
[CI] Temporarily pin pylint to 3.2.3 (#10494) 
* [CI] Temporarily pin pylint to 3.2.3

* Add quotes

* Correct env
 2024-06-26 14:08:49 -07:00
Hyunsu Cho
5efc979551
[CI] [Hotfix] Make S3 upload conditional 2024-06-26 06:21:46 -07:00
Philip Hyunsu Cho
08658b124d
[CI] Add CI pipeline to build libxgboost4j.so targeting Linux ARM64 (#10487) 2024-06-26 01:43:15 -07:00
Philip Hyunsu Cho
4c1920a6a5
[CI] Fix S3 upload for manylinux2014 wheels (#10483) 2024-06-24 14:40:28 -07:00
Philip Hyunsu Cho
d4dee25eb3
[CI] Set up pipeline to build manylinux2014 wheels (#10478) 2024-06-24 12:25:26 -07:00
Jiaming Yuan
26eb68859f
Consistently report error in tests. (#10453) 2024-06-21 14:35:22 +08:00
Jiaming Yuan
e5f1720656
[EM] Avoid writing cut matrix to cache. (#10444) 2024-06-19 18:03:38 +08:00
Philip Hyunsu Cho
45150a844e
[CI] [jvm-packages] Build libxgboost4j.dylib on M1 MacOS with OpenMP support (#10449) 2024-06-18 20:20:29 -07:00
Philip Hyunsu Cho
8689f0b562
[CI] Stop vendoring libomp.dylib in MacOS Python wheels (#10440) 2024-06-18 19:17:02 -07:00
Jiaming Yuan
b9e5229ff2
Update rapids (#10435) 
* [CI] Update RAPIDS to latest stable

* RMM.

---------

Co-authored-by: hcho3 <2532981+hcho3@users.noreply.github.com>
Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2024-06-18 05:01:57 +08:00
Jiaming Yuan
b4cc350ec5
Fix categorical data with external memory. (#10433) 2024-06-18 04:34:54 +08:00
Philip Hyunsu Cho
bc3747bdce
[CI] Migrate to rockylinux8 / manylinux_2_28_x86_64 (#10399) 
* [CI] Migrate to rockylinux8 / manylinux_2_28_x86_64

* Scrub all references to CentOS 7

* Fix

* Remove use of yum

* Use gcc-10 in cpu

* Temporarily disable -Werror

* Use GCC 9 for now

* Roll back gRPC

* Scrub all references to manylinux2014_x86_64

* Revise rename_whl.py to handle no-op rename

* Change JDK_VERSION back to 8

* Reviewer's comment

* Use GCC 10

* Use Spark 3.5.1, same as in pom.xml

* Fix JAR install
 2024-06-17 12:07:49 -07:00
Jiaming Yuan
320e7c2041
[CI] Enable CI binary build for the vertical federated learning branch. (#10417) 
Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2024-06-17 17:01:04 +08:00
Jiaming Yuan
6c83c8c2ef
Allow blocking launch of federated tracker. (#10414) 
---------

Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2024-06-16 01:43:53 +08:00
Philip Hyunsu Cho
1ace9c66ec
[CI] Fix JVM tests on Windows (#10404) 2024-06-15 00:21:40 -07:00
Richard (Rick) Zamora
dc14f98f40
Avoid default tokenization in Dask (#10398) 
---------

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2024-06-14 19:44:54 +08:00
Bobby Wang
cf0c1d0888
[pyspark] Avoid repartition. (#10408) 2024-06-12 02:26:10 +08:00
Jiaming Yuan
c9f5fcaf21
[col] Small cleanup to federated comm. (#10397) 2024-06-07 21:19:04 +08:00
Jiaming Yuan
979e392deb
Fix warnings in GPU dask tests. (#10358) 2024-06-04 12:58:58 +08:00
Philip Hyunsu Cho
4057f861c1
[CI] Add nightly CI job to test against dev version of deps (#10351) 
* [CI] Add nightly CI job to test against dev version of deps

* Update build-containers.sh

* Add build step

* Wait for build artifact

* Try pinning dask

* Address reviewers' comments

* Fix unbound variable error

* Specify dev version exactly

* Pin dask=2024.1.1
 2024-06-03 19:28:55 -07:00
Jiaming Yuan
d2d01d977a
Remove unnecessary fetch operations in external memory. (#10342) 2024-05-31 13:16:40 +08:00
Jiaming Yuan
e6eefea5e2
[coll] Move the rabit poll helper. (#10349) 2024-05-31 08:02:21 +08:00
Jiaming Yuan
7354955cbb
Test federated plugin using GitHub action. (#10336) 
Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2024-05-29 02:28:14 +08:00
Philip Hyunsu Cho
7ae5c972f9
[CI] Upgrade github workflows to use latest Conda setup action (#10320) 
Co-authored-by: Christian Clauss <cclauss@me.com>
Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2024-05-28 10:23:07 -07:00
Bobby Wang
9def441e9a
[CI] add script to generate meta info and upload to s3 (#10295) 
* [CI] add script to generate meta info and upload to s3

* Write Python script to generate meta.json

* Update other pipelines

* Add wheel_name field

* Add description

---------

Co-authored-by: Hyunsu Cho <phcho@nvidia.com>
 2024-05-24 10:03:28 -07:00
Jiaming Yuan
d5fcbee44b
Add timeout for distributed tests. (#10315) 2024-05-23 11:11:49 +08:00
Jiaming Yuan
1b25d23583
[JVM-packages] Prevent memory leak. (#10307) 2024-05-22 13:47:59 +08:00
Dmitry Razdoburdin
c7e7ce7569
[SYCL] Add nodes initialisation (#10269) 
---------

Co-authored-by: Dmitry Razdoburdin <>
Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2024-05-21 23:38:52 +08:00
Jiaming Yuan
a5a58102e5
Revamp the rabit implementation. (#10112) 
This PR replaces the original RABIT implementation with a new one, which has already been partially merged into XGBoost. The new one features:
- Federated learning for both CPU and GPU.
- NCCL.
- More data types.
- A unified interface for all the underlying implementations.
- Improved timeout handling for both tracker and workers.
- Exhausted tests with metrics (fixed a couple of bugs along the way).
- A reusable tracker for Python and JVM packages.
 2024-05-20 11:56:23 +08:00
Jiaming Yuan
835e59e538
Use a thread pool for external memory. (#10288) 2024-05-16 19:32:12 +08:00
Jiaming Yuan
ca1d04bcb7
Release data in cache. (#10286) 2024-05-14 14:20:19 +08:00
Jiaming Yuan
f1f69ff10e
[CI] Fixes for using the latest modin. (#10285) 2024-05-14 12:13:35 +08:00
Jiaming Yuan
d81e319e78
Fixes for the latest pandas. (#10266) 
Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
 2024-05-12 11:15:46 +08:00
Dmitry Razdoburdin
f588252481
[sycl] add loss guided hist building (#10251) 
Co-authored-by: Dmitry Razdoburdin <>
 2024-05-10 22:35:13 +08:00
Jiaming Yuan
73afef1a6e
Fixes for numpy 2.0. (#10252) 2024-05-07 03:54:32 +08:00
Dmitry Razdoburdin
dcc9639b91
[sycl] add data initialisation for training (#10222) 
Co-authored-by: Dmitry Razdoburdin <>
Co-authored-by: Philip Hyunsu Cho <chohyu01@cs.washington.edu>
Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2024-05-05 12:07:10 +08:00
Jiaming Yuan
5e64276a9b
Update nvtx. (#10227) 2024-04-29 06:33:46 +08:00
Jiaming Yuan
837d44a345
Support more sklearn tags for testing. (#10230) 2024-04-29 06:33:23 +08:00
Philip Hyunsu Cho
edb945d59b
[CI] Use native arm64 worker in GHAction to build M1 wheel (#10225) 
* [CI] Use native arm64 worker in GHAction to build M1 wheel

* Set up Conda

* Use mamba

* debug

* fix

* fix

* fix

* fix

* fix

* Temporarily disable other tests

* Fix prefix

* Use micromamba

* Use conda-incubator/setup-miniconda

* Use mambaforge

* Fix

* Fix prefix

* Don't use deprecated set-output

* Add verbose output from build

* verbose

* Specify arch

* Bump setup-miniconda to v3

* Use Python 3.9

* Restore deleted files

* WAR.

---------

Co-authored-by: Jiaming Yuan <jm.yuan@outlook.com>
 2024-04-26 10:16:55 -07:00
Dmitry Razdoburdin
58513dc288
[SYCL] Add sampling initialization (#10216) 
---------

Co-authored-by: Dmitry Razdoburdin <>
 2024-04-25 04:35:52 +08:00
Jiaming Yuan
59d7b8dc72
[doc] Add typing to dask demos. (#10207) 2024-04-23 00:57:05 +08:00
Jiaming Yuan
3fbb221fec
[coll] Implement shutdown for tracker and comm. (#10208) 
- Force shutdown the tracker.
- Implement shutdown notice for error handling thread in comm.
 2024-04-20 04:08:17 +08:00