fix hdfs

rabit-learn/io/hdfs-inl.h

@@ -17,8 +17,12 @@ namespace rabit {
 namespace io {
 class HDFSStream : public utils::ISeekStream {
  public:
-  HDFSStream(hdfsFS fs, const char *fname, const char *mode)
+  HDFSStream(hdfsFS fs,
-      : fs_(fs), at_end_(false) {
+             const char *fname,
+             const char *mode,
+             bool disconnect_when_done)
+      : fs_(fs), at_end_(false),
+        disconnect_when_done_(disconnect_when_done) {
     int flag;
     if (!strcmp(mode, "r")) {
       flag = O_RDONLY;
@@ -35,6 +39,9 @@ class HDFSStream : public utils::ISeekStream {
   }
   virtual ~HDFSStream(void) {
     this->Close();
+    if (disconnect_when_done_) {
+      utils::Check(hdfsDisconnect(fs_) == 0, "hdfsDisconnect error");
+    }
   }
   virtual size_t Read(void *ptr, size_t size) {
     tSize nread = hdfsRead(fs_, fp_, ptr, size);
@@ -90,6 +97,7 @@ class HDFSStream : public utils::ISeekStream {
   hdfsFS fs_;
   hdfsFile fp_;
   bool at_end_;
+  bool disconnect_when_done_;
 };
 
 /*! \brief line split from normal file system */
@@ -124,12 +132,15 @@ class HDFSSplit : public LineSplitBase {
     }
     LineSplitBase::Init(fsize, rank, nsplit);
   }
-  virtual ~HDFSSplit(void) {}
+  virtual ~HDFSSplit(void) {
+    LineSplitBase::Destroy();
+    utils::Check(hdfsDisconnect(fs_) == 0, "hdfsDisconnect error");
+  }
   
  protected:
   virtual utils::ISeekStream *GetFile(size_t file_index) {
     utils::Assert(file_index < fnames_.size(), "file index exceed bound"); 
-    return new HDFSStream(fs_, fnames_[file_index].c_str(), "r");
+    return new HDFSStream(fs_, fnames_[file_index].c_str(), "r", false);
   }
 
  private:

rabit-learn/io/io-inl.h

@@ -55,7 +55,7 @@ inline IStream *CreateStream(const char *uri, const char *mode) {
   }
   if (!strncmp(uri, "hdfs://", 7)) {
 #if RABIT_USE_HDFS
-    return new HDFSStream(hdfsConnect("default", 0), uri, mode);
+    return new HDFSStream(hdfsConnect("default", 0), uri, mode, true);
 #else
     utils::Error("Please compile with RABIT_USE_HDFS=1");
 #endif

rabit-learn/io/line_split-inl.h

@@ -18,7 +18,7 @@ namespace io {
 class LineSplitBase : public InputSplit {
  public:
   virtual ~LineSplitBase() {
-    if (fs_ != NULL) delete fs_;
+    this->Destroy();
   }
   virtual bool NextLine(std::string *out_data) {
     if (file_ptr_ >= file_ptr_end_ &&
@@ -57,6 +57,15 @@ class LineSplitBase : public InputSplit {
   LineSplitBase(void)
       : fs_(NULL), reader_(kBufferSize) {
   }
+  /*!
+   * \brief destroy all the filesystem resources owned
+   * can be called by child destructor
+   */
+  inline void Destroy(void) {
+    if (fs_ != NULL) {
+      delete fs_; fs_ = NULL;
+    }
+  }
   /*!
    * \brief initialize the line spliter,
    * \param file_size, size of each std::FILEs

yarn/run_hdfs_prog.py

@@ -1,6 +1,7 @@
 #!/usr/bin/env python
 """
-this script helps setup classpath env for HDFS, before running the program
+this script helps setup classpath env for HDFS, before running program
+that links with libhdfs
 """
 import glob
 import sys