Clang-tidy static analysis (#3222)

* Clang-tidy static analysis

* Modernise checks

* Google coding standard checks

* Identifier renaming according to Google style
This commit is contained in:
Rory Mitchell
2018-04-19 18:57:13 +12:00
committed by GitHub
parent 3242b0a378
commit ccf80703ef
97 changed files with 3407 additions and 3354 deletions

View File

@@ -23,22 +23,22 @@ namespace tree {
DMLC_REGISTRY_FILE_TAG(updater_gpu_hist);
typedef bst_gpair_precise gpair_sum_t;
using GradientPairSumT = GradientPairPrecise;
template <int BLOCK_THREADS, typename reduce_t, typename temp_storage_t>
__device__ gpair_sum_t ReduceFeature(const gpair_sum_t* begin,
const gpair_sum_t* end,
temp_storage_t* temp_storage) {
__shared__ cub::Uninitialized<gpair_sum_t> uninitialized_sum;
gpair_sum_t& shared_sum = uninitialized_sum.Alias();
template <int BLOCK_THREADS, typename ReduceT, typename TempStorageT>
__device__ GradientPairSumT ReduceFeature(const GradientPairSumT* begin,
const GradientPairSumT* end,
TempStorageT* temp_storage) {
__shared__ cub::Uninitialized<GradientPairSumT> uninitialized_sum;
GradientPairSumT& shared_sum = uninitialized_sum.Alias();
gpair_sum_t local_sum = gpair_sum_t();
GradientPairSumT local_sum = GradientPairSumT();
for (auto itr = begin; itr < end; itr += BLOCK_THREADS) {
bool thread_active = itr + threadIdx.x < end;
// Scan histogram
gpair_sum_t bin = thread_active ? *(itr + threadIdx.x) : gpair_sum_t();
GradientPairSumT bin = thread_active ? *(itr + threadIdx.x) : GradientPairSumT();
local_sum += reduce_t(temp_storage->sum_reduce).Reduce(bin, cub::Sum());
local_sum += ReduceT(temp_storage->sum_reduce).Reduce(bin, cub::Sum());
}
if (threadIdx.x == 0) {
@@ -49,41 +49,41 @@ __device__ gpair_sum_t ReduceFeature(const gpair_sum_t* begin,
return shared_sum;
}
template <int BLOCK_THREADS, typename reduce_t, typename scan_t,
typename max_reduce_t, typename temp_storage_t>
__device__ void EvaluateFeature(int fidx, const gpair_sum_t* hist,
template <int BLOCK_THREADS, typename ReduceT, typename scan_t,
typename max_ReduceT, typename TempStorageT>
__device__ void EvaluateFeature(int fidx, const GradientPairSumT* hist,
const int* feature_segments, float min_fvalue,
const float* gidx_fvalue_map,
DeviceSplitCandidate* best_split,
const DeviceNodeStats& node,
const GPUTrainingParam& param,
temp_storage_t* temp_storage, int constraint,
TempStorageT* temp_storage, int constraint,
const ValueConstraint& value_constraint) {
int gidx_begin = feature_segments[fidx];
int gidx_end = feature_segments[fidx + 1];
gpair_sum_t feature_sum = ReduceFeature<BLOCK_THREADS, reduce_t>(
GradientPairSumT feature_sum = ReduceFeature<BLOCK_THREADS, ReduceT>(
hist + gidx_begin, hist + gidx_end, temp_storage);
auto prefix_op = SumCallbackOp<gpair_sum_t>();
auto prefix_op = SumCallbackOp<GradientPairSumT>();
for (int scan_begin = gidx_begin; scan_begin < gidx_end;
scan_begin += BLOCK_THREADS) {
bool thread_active = scan_begin + threadIdx.x < gidx_end;
gpair_sum_t bin =
thread_active ? hist[scan_begin + threadIdx.x] : gpair_sum_t();
GradientPairSumT bin =
thread_active ? hist[scan_begin + threadIdx.x] : GradientPairSumT();
scan_t(temp_storage->scan).ExclusiveScan(bin, bin, cub::Sum(), prefix_op);
// Calculate gain
gpair_sum_t parent_sum = gpair_sum_t(node.sum_gradients);
GradientPairSumT parent_sum = GradientPairSumT(node.sum_gradients);
gpair_sum_t missing = parent_sum - feature_sum;
GradientPairSumT missing = parent_sum - feature_sum;
bool missing_left = true;
const float null_gain = -FLT_MAX;
float gain = null_gain;
if (thread_active) {
gain = loss_chg_missing(bin, missing, parent_sum, node.root_gain, param,
gain = LossChangeMissing(bin, missing, parent_sum, node.root_gain, param,
constraint, value_constraint, missing_left);
}
@@ -92,7 +92,7 @@ __device__ void EvaluateFeature(int fidx, const gpair_sum_t* hist,
// Find thread with best gain
cub::KeyValuePair<int, float> tuple(threadIdx.x, gain);
cub::KeyValuePair<int, float> best =
max_reduce_t(temp_storage->max_reduce).Reduce(tuple, cub::ArgMax());
max_ReduceT(temp_storage->max_reduce).Reduce(tuple, cub::ArgMax());
__shared__ cub::KeyValuePair<int, float> block_max;
if (threadIdx.x == 0) {
@@ -107,11 +107,11 @@ __device__ void EvaluateFeature(int fidx, const gpair_sum_t* hist,
float fvalue =
gidx == gidx_begin ? min_fvalue : gidx_fvalue_map[gidx - 1];
gpair_sum_t left = missing_left ? bin + missing : bin;
gpair_sum_t right = parent_sum - left;
GradientPairSumT left = missing_left ? bin + missing : bin;
GradientPairSumT right = parent_sum - left;
best_split->Update(gain, missing_left ? LeftDir : RightDir, fvalue, fidx,
left, right, param);
best_split->Update(gain, missing_left ? kLeftDir : kRightDir, fvalue, fidx,
GradientPair(left), GradientPair(right), param);
}
__syncthreads();
}
@@ -119,17 +119,17 @@ __device__ void EvaluateFeature(int fidx, const gpair_sum_t* hist,
template <int BLOCK_THREADS>
__global__ void evaluate_split_kernel(
const gpair_sum_t* d_hist, int nidx, uint64_t n_features,
const GradientPairSumT* d_hist, int nidx, uint64_t n_features,
DeviceNodeStats nodes, const int* d_feature_segments,
const float* d_fidx_min_map, const float* d_gidx_fvalue_map,
GPUTrainingParam gpu_param, DeviceSplitCandidate* d_split,
ValueConstraint value_constraint, int* d_monotonic_constraints) {
typedef cub::KeyValuePair<int, float> ArgMaxT;
typedef cub::BlockScan<gpair_sum_t, BLOCK_THREADS, cub::BLOCK_SCAN_WARP_SCANS>
typedef cub::BlockScan<GradientPairSumT, BLOCK_THREADS, cub::BLOCK_SCAN_WARP_SCANS>
BlockScanT;
typedef cub::BlockReduce<ArgMaxT, BLOCK_THREADS> MaxReduceT;
typedef cub::BlockReduce<gpair_sum_t, BLOCK_THREADS> SumReduceT;
typedef cub::BlockReduce<GradientPairSumT, BLOCK_THREADS> SumReduceT;
union TempStorage {
typename BlockScanT::TempStorage scan;
@@ -163,8 +163,8 @@ __global__ void evaluate_split_kernel(
}
// Find a gidx value for a given feature otherwise return -1 if not found
template <typename gidx_iter_t>
__device__ int BinarySearchRow(bst_uint begin, bst_uint end, gidx_iter_t data,
template <typename GidxIterT>
__device__ int BinarySearchRow(bst_uint begin, bst_uint end, GidxIterT data,
int fidx_begin, int fidx_end) {
bst_uint previous_middle = UINT32_MAX;
while (end != begin) {
@@ -189,19 +189,19 @@ __device__ int BinarySearchRow(bst_uint begin, bst_uint end, gidx_iter_t data,
}
struct DeviceHistogram {
dh::bulk_allocator<dh::memory_type::DEVICE> ba;
dh::dvec<gpair_sum_t> data;
dh::BulkAllocator<dh::MemoryType::kDevice> ba;
dh::DVec<GradientPairSumT> data;
int n_bins;
void Init(int device_idx, int max_nodes, int n_bins, bool silent) {
this->n_bins = n_bins;
ba.allocate(device_idx, silent, &data, size_t(max_nodes) * size_t(n_bins));
ba.Allocate(device_idx, silent, &data, size_t(max_nodes) * size_t(n_bins));
}
void Reset() { data.fill(gpair_sum_t()); }
gpair_sum_t* GetHistPtr(int nidx) { return data.data() + nidx * n_bins; }
void Reset() { data.Fill(GradientPairSumT()); }
GradientPairSumT* GetHistPtr(int nidx) { return data.Data() + nidx * n_bins; }
void PrintNidx(int nidx) const {
auto h_data = data.as_vector();
auto h_data = data.AsVector();
std::cout << "nidx " << nidx << ":\n";
for (int i = n_bins * nidx; i < n_bins * (nidx + 1); i++) {
std::cout << h_data[i] << " ";
@@ -216,7 +216,7 @@ struct CalcWeightTrainParam {
float reg_lambda;
float max_delta_step;
float learning_rate;
__host__ __device__ CalcWeightTrainParam(const TrainParam& p)
XGBOOST_DEVICE explicit CalcWeightTrainParam(const TrainParam& p)
: min_child_weight(p.min_child_weight),
reg_alpha(p.reg_alpha),
reg_lambda(p.reg_lambda),
@@ -240,19 +240,19 @@ struct DeviceShard {
int device_idx;
int normalised_device_idx; // Device index counting from param.gpu_id
dh::bulk_allocator<dh::memory_type::DEVICE> ba;
dh::dvec<common::compressed_byte_t> gidx_buffer;
dh::dvec<bst_gpair> gpair;
dh::dvec2<bst_uint> ridx; // Row index relative to this shard
dh::dvec2<int> position;
dh::BulkAllocator<dh::MemoryType::kDevice> ba;
dh::DVec<common::CompressedByteT> gidx_buffer;
dh::DVec<GradientPair> gpair;
dh::DVec2<bst_uint> ridx; // Row index relative to this shard
dh::DVec2<int> position;
std::vector<Segment> ridx_segments;
dh::dvec<int> feature_segments;
dh::dvec<float> gidx_fvalue_map;
dh::dvec<float> min_fvalue;
dh::dvec<int> monotone_constraints;
dh::dvec<bst_float> prediction_cache;
std::vector<bst_gpair> node_sum_gradients;
dh::dvec<bst_gpair> node_sum_gradients_d;
dh::DVec<int> feature_segments;
dh::DVec<float> gidx_fvalue_map;
dh::DVec<float> min_fvalue;
dh::DVec<int> monotone_constraints;
dh::DVec<bst_float> prediction_cache;
std::vector<GradientPair> node_sum_gradients;
dh::DVec<GradientPair> node_sum_gradients_d;
common::CompressedIterator<uint32_t> gidx;
int row_stride;
bst_uint row_begin_idx; // The row offset for this shard
@@ -311,8 +311,8 @@ struct DeviceShard {
<< "Max leaves and max depth cannot both be unconstrained for "
"gpu_hist.";
int max_nodes =
param.max_leaves > 0 ? param.max_leaves * 2 : n_nodes(param.max_depth);
ba.allocate(device_idx, param.silent, &gidx_buffer, compressed_size_bytes,
param.max_leaves > 0 ? param.max_leaves * 2 : MaxNodesDepth(param.max_depth);
ba.Allocate(device_idx, param.silent, &gidx_buffer, compressed_size_bytes,
&gpair, n_rows, &ridx, n_rows, &position, n_rows,
&prediction_cache, n_rows, &node_sum_gradients_d, max_nodes,
&feature_segments, gmat.cut->row_ptr.size(), &gidx_fvalue_map,
@@ -328,11 +328,11 @@ struct DeviceShard {
// Compress gidx
common::CompressedBufferWriter cbw(num_symbols);
std::vector<common::compressed_byte_t> host_buffer(gidx_buffer.size());
std::vector<common::CompressedByteT> host_buffer(gidx_buffer.Size());
cbw.Write(host_buffer.data(), ellpack_matrix.begin(), ellpack_matrix.end());
gidx_buffer = host_buffer;
gidx =
common::CompressedIterator<uint32_t>(gidx_buffer.data(), num_symbols);
common::CompressedIterator<uint32_t>(gidx_buffer.Data(), num_symbols);
common::CompressedIterator<uint32_t> ci_host(host_buffer.data(),
num_symbols);
@@ -369,19 +369,19 @@ struct DeviceShard {
}
// Reset values for each update iteration
void Reset(HostDeviceVector<bst_gpair>* dh_gpair, int device) {
void Reset(HostDeviceVector<GradientPair>* dh_gpair, int device) {
auto begin = dh_gpair->tbegin(device);
dh::safe_cuda(cudaSetDevice(device_idx));
position.current_dvec().fill(0);
position.CurrentDVec().Fill(0);
std::fill(node_sum_gradients.begin(), node_sum_gradients.end(),
bst_gpair());
GradientPair());
thrust::sequence(ridx.current_dvec().tbegin(), ridx.current_dvec().tend());
thrust::sequence(ridx.CurrentDVec().tbegin(), ridx.CurrentDVec().tend());
std::fill(ridx_segments.begin(), ridx_segments.end(), Segment(0, 0));
ridx_segments.front() = Segment(0, ridx.size());
ridx_segments.front() = Segment(0, ridx.Size());
this->gpair.copy(begin + row_begin_idx, begin + row_end_idx);
subsample_gpair(&gpair, param.subsample, row_begin_idx);
SubsampleGradientPair(&gpair, param.subsample, row_begin_idx);
hist.Reset();
}
@@ -389,13 +389,13 @@ struct DeviceShard {
auto segment = ridx_segments[nidx];
auto d_node_hist = hist.GetHistPtr(nidx);
auto d_gidx = gidx;
auto d_ridx = ridx.current();
auto d_gpair = gpair.data();
auto d_ridx = ridx.Current();
auto d_gpair = gpair.Data();
auto row_stride = this->row_stride;
auto null_gidx_value = this->null_gidx_value;
auto n_elements = segment.Size() * row_stride;
dh::launch_n(device_idx, n_elements, [=] __device__(size_t idx) {
dh::LaunchN(device_idx, n_elements, [=] __device__(size_t idx) {
int ridx = d_ridx[(idx / row_stride) + segment.begin];
int gidx = d_gidx[ridx * row_stride + idx % row_stride];
@@ -410,7 +410,7 @@ struct DeviceShard {
auto d_node_hist_histogram = hist.GetHistPtr(nidx_histogram);
auto d_node_hist_subtraction = hist.GetHistPtr(nidx_subtraction);
dh::launch_n(device_idx, hist.n_bins, [=] __device__(size_t idx) {
dh::LaunchN(device_idx, hist.n_bins, [=] __device__(size_t idx) {
d_node_hist_subtraction[idx] =
d_node_hist_parent[idx] - d_node_hist_histogram[idx];
});
@@ -432,11 +432,11 @@ struct DeviceShard {
auto d_left_count = temp_memory.Pointer<int64_t>();
dh::safe_cuda(cudaMemset(d_left_count, 0, sizeof(int64_t)));
auto segment = ridx_segments[nidx];
auto d_ridx = ridx.current();
auto d_position = position.current();
auto d_ridx = ridx.Current();
auto d_position = position.Current();
auto d_gidx = gidx;
auto row_stride = this->row_stride;
dh::launch_n<1, 512>(
dh::LaunchN<1, 512>(
device_idx, segment.Size(), [=] __device__(bst_uint idx) {
idx += segment.begin;
auto ridx = d_ridx[idx];
@@ -482,22 +482,22 @@ struct DeviceShard {
size_t temp_storage_bytes = 0;
cub::DeviceRadixSort::SortPairs(
nullptr, temp_storage_bytes, position.current() + segment.begin,
position.other() + segment.begin, ridx.current() + segment.begin,
nullptr, temp_storage_bytes, position.Current() + segment.begin,
position.other() + segment.begin, ridx.Current() + segment.begin,
ridx.other() + segment.begin, segment.Size(), min_bits, max_bits);
temp_memory.LazyAllocate(temp_storage_bytes);
cub::DeviceRadixSort::SortPairs(
temp_memory.d_temp_storage, temp_memory.temp_storage_bytes,
position.current() + segment.begin, position.other() + segment.begin,
ridx.current() + segment.begin, ridx.other() + segment.begin,
position.Current() + segment.begin, position.other() + segment.begin,
ridx.Current() + segment.begin, ridx.other() + segment.begin,
segment.Size(), min_bits, max_bits);
dh::safe_cuda(cudaMemcpy(
position.current() + segment.begin, position.other() + segment.begin,
position.Current() + segment.begin, position.other() + segment.begin,
segment.Size() * sizeof(int), cudaMemcpyDeviceToDevice));
dh::safe_cuda(cudaMemcpy(
ridx.current() + segment.begin, ridx.other() + segment.begin,
ridx.Current() + segment.begin, ridx.other() + segment.begin,
segment.Size() * sizeof(bst_uint), cudaMemcpyDeviceToDevice));
}
@@ -505,8 +505,8 @@ struct DeviceShard {
dh::safe_cuda(cudaSetDevice(device_idx));
if (!prediction_cache_initialised) {
dh::safe_cuda(cudaMemcpy(
prediction_cache.data(), &out_preds_d[row_begin_idx],
prediction_cache.size() * sizeof(bst_float), cudaMemcpyDefault));
prediction_cache.Data(), &out_preds_d[row_begin_idx],
prediction_cache.Size() * sizeof(bst_float), cudaMemcpyDefault));
}
prediction_cache_initialised = true;
@@ -514,13 +514,13 @@ struct DeviceShard {
thrust::copy(node_sum_gradients.begin(), node_sum_gradients.end(),
node_sum_gradients_d.tbegin());
auto d_position = position.current();
auto d_ridx = ridx.current();
auto d_node_sum_gradients = node_sum_gradients_d.data();
auto d_prediction_cache = prediction_cache.data();
auto d_position = position.Current();
auto d_ridx = ridx.Current();
auto d_node_sum_gradients = node_sum_gradients_d.Data();
auto d_prediction_cache = prediction_cache.Data();
dh::launch_n(
device_idx, prediction_cache.size(), [=] __device__(int local_idx) {
dh::LaunchN(
device_idx, prediction_cache.Size(), [=] __device__(int local_idx) {
int pos = d_position[local_idx];
bst_float weight = CalcWeight(param_d, d_node_sum_gradients[pos]);
d_prediction_cache[d_ridx[local_idx]] +=
@@ -528,8 +528,8 @@ struct DeviceShard {
});
dh::safe_cuda(cudaMemcpy(
&out_preds_d[row_begin_idx], prediction_cache.data(),
prediction_cache.size() * sizeof(bst_float), cudaMemcpyDefault));
&out_preds_d[row_begin_idx], prediction_cache.Data(),
prediction_cache.Size() * sizeof(bst_float), cudaMemcpyDefault));
}
};
@@ -537,33 +537,32 @@ class GPUHistMaker : public TreeUpdater {
public:
struct ExpandEntry;
GPUHistMaker() : initialised(false), p_last_fmat_(nullptr) {}
~GPUHistMaker() {}
GPUHistMaker() : initialised_(false), p_last_fmat_(nullptr) {}
void Init(
const std::vector<std::pair<std::string, std::string>>& args) override {
param.InitAllowUnknown(args);
CHECK(param.n_gpus != 0) << "Must have at least one device";
n_devices = param.n_gpus;
param_.InitAllowUnknown(args);
CHECK(param_.n_gpus != 0) << "Must have at least one device";
n_devices_ = param_.n_gpus;
dh::check_compute_capability();
dh::CheckComputeCapability();
if (param.grow_policy == TrainParam::kLossGuide) {
qexpand_.reset(new ExpandQueue(loss_guide));
if (param_.grow_policy == TrainParam::kLossGuide) {
qexpand_.reset(new ExpandQueue(LossGuide));
} else {
qexpand_.reset(new ExpandQueue(depth_wise));
qexpand_.reset(new ExpandQueue(DepthWise));
}
monitor.Init("updater_gpu_hist", param.debug_verbose);
monitor_.Init("updater_gpu_hist", param_.debug_verbose);
}
void Update(HostDeviceVector<bst_gpair>* gpair, DMatrix* dmat,
void Update(HostDeviceVector<GradientPair>* gpair, DMatrix* dmat,
const std::vector<RegTree*>& trees) override {
monitor.Start("Update", dList);
GradStats::CheckInfo(dmat->info());
monitor_.Start("Update", device_list_);
GradStats::CheckInfo(dmat->Info());
// rescale learning rate according to size of trees
float lr = param.learning_rate;
param.learning_rate = lr / trees.size();
ValueConstraint::Init(&param, dmat->info().num_col);
float lr = param_.learning_rate;
param_.learning_rate = lr / trees.size();
ValueConstraint::Init(&param_, dmat->Info().num_col_);
// build tree
try {
for (size_t i = 0; i < trees.size(); ++i) {
@@ -572,97 +571,97 @@ class GPUHistMaker : public TreeUpdater {
} catch (const std::exception& e) {
LOG(FATAL) << "GPU plugin exception: " << e.what() << std::endl;
}
param.learning_rate = lr;
monitor.Stop("Update", dList);
param_.learning_rate = lr;
monitor_.Stop("Update", device_list_);
}
void InitDataOnce(DMatrix* dmat) {
info = &dmat->info();
monitor.Start("Quantiles", dList);
hmat_.Init(dmat, param.max_bin);
info_ = &dmat->Info();
monitor_.Start("Quantiles", device_list_);
hmat_.Init(dmat, param_.max_bin);
gmat_.cut = &hmat_;
gmat_.Init(dmat);
monitor.Stop("Quantiles", dList);
n_bins = hmat_.row_ptr.back();
monitor_.Stop("Quantiles", device_list_);
n_bins_ = hmat_.row_ptr.back();
int n_devices = dh::n_devices(param.n_gpus, info->num_row);
int n_devices = dh::NDevices(param_.n_gpus, info_->num_row_);
bst_uint row_begin = 0;
bst_uint shard_size =
std::ceil(static_cast<double>(info->num_row) / n_devices);
std::ceil(static_cast<double>(info_->num_row_) / n_devices);
dList.resize(n_devices);
device_list_.resize(n_devices);
for (int d_idx = 0; d_idx < n_devices; ++d_idx) {
int device_idx = (param.gpu_id + d_idx) % dh::n_visible_devices();
dList[d_idx] = device_idx;
int device_idx = (param_.gpu_id + d_idx) % dh::NVisibleDevices();
device_list_[d_idx] = device_idx;
}
reducer.Init(dList);
reducer_.Init(device_list_);
// Partition input matrix into row segments
std::vector<size_t> row_segments;
shards.resize(n_devices);
shards_.resize(n_devices);
row_segments.push_back(0);
for (int d_idx = 0; d_idx < n_devices; ++d_idx) {
bst_uint row_end =
std::min(static_cast<size_t>(row_begin + shard_size), info->num_row);
std::min(static_cast<size_t>(row_begin + shard_size), info_->num_row_);
row_segments.push_back(row_end);
row_begin = row_end;
}
// Create device shards
omp_set_num_threads(shards.size());
omp_set_num_threads(shards_.size());
#pragma omp parallel
{
auto cpu_thread_id = omp_get_thread_num();
shards[cpu_thread_id] = std::unique_ptr<DeviceShard>(
new DeviceShard(dList[cpu_thread_id], cpu_thread_id, gmat_,
shards_[cpu_thread_id] = std::unique_ptr<DeviceShard>(
new DeviceShard(device_list_[cpu_thread_id], cpu_thread_id, gmat_,
row_segments[cpu_thread_id],
row_segments[cpu_thread_id + 1], n_bins, param));
row_segments[cpu_thread_id + 1], n_bins_, param_));
}
p_last_fmat_ = dmat;
initialised = true;
initialised_ = true;
}
void InitData(HostDeviceVector<bst_gpair>* gpair, DMatrix* dmat,
void InitData(HostDeviceVector<GradientPair>* gpair, DMatrix* dmat,
const RegTree& tree) {
monitor.Start("InitDataOnce", dList);
if (!initialised) {
monitor_.Start("InitDataOnce", device_list_);
if (!initialised_) {
this->InitDataOnce(dmat);
}
monitor.Stop("InitDataOnce", dList);
monitor_.Stop("InitDataOnce", device_list_);
column_sampler.Init(info->num_col, param);
column_sampler_.Init(info_->num_col_, param_);
// Copy gpair & reset memory
monitor.Start("InitDataReset", dList);
omp_set_num_threads(shards.size());
monitor_.Start("InitDataReset", device_list_);
omp_set_num_threads(shards_.size());
// TODO(canonizer): make it parallel again once HostDeviceVector is
// thread-safe
for (int shard = 0; shard < shards.size(); ++shard)
shards[shard]->Reset(gpair, param.gpu_id);
monitor.Stop("InitDataReset", dList);
for (int shard = 0; shard < shards_.size(); ++shard)
shards_[shard]->Reset(gpair, param_.gpu_id);
monitor_.Stop("InitDataReset", device_list_);
}
void AllReduceHist(int nidx) {
for (auto& shard : shards) {
for (auto& shard : shards_) {
auto d_node_hist = shard->hist.GetHistPtr(nidx);
reducer.AllReduceSum(
reducer_.AllReduceSum(
shard->normalised_device_idx,
reinterpret_cast<gpair_sum_t::value_t*>(d_node_hist),
reinterpret_cast<gpair_sum_t::value_t*>(d_node_hist),
n_bins * (sizeof(gpair_sum_t) / sizeof(gpair_sum_t::value_t)));
reinterpret_cast<GradientPairSumT::ValueT*>(d_node_hist),
reinterpret_cast<GradientPairSumT::ValueT*>(d_node_hist),
n_bins_ * (sizeof(GradientPairSumT) / sizeof(GradientPairSumT::ValueT)));
}
reducer.Synchronize();
reducer_.Synchronize();
}
void BuildHistLeftRight(int nidx_parent, int nidx_left, int nidx_right) {
size_t left_node_max_elements = 0;
size_t right_node_max_elements = 0;
for (auto& shard : shards) {
for (auto& shard : shards_) {
left_node_max_elements = (std::max)(
left_node_max_elements, shard->ridx_segments[nidx_left].Size());
right_node_max_elements = (std::max)(
@@ -677,13 +676,13 @@ class GPUHistMaker : public TreeUpdater {
subtraction_trick_nidx = nidx_left;
}
for (auto& shard : shards) {
for (auto& shard : shards_) {
shard->BuildHist(build_hist_nidx);
}
this->AllReduceHist(build_hist_nidx);
for (auto& shard : shards) {
for (auto& shard : shards_) {
shard->SubtractionTrick(nidx_parent, build_hist_nidx,
subtraction_trick_nidx);
}
@@ -692,12 +691,12 @@ class GPUHistMaker : public TreeUpdater {
// Returns best loss
std::vector<DeviceSplitCandidate> EvaluateSplits(
const std::vector<int>& nidx_set, RegTree* p_tree) {
auto columns = info->num_col;
auto columns = info_->num_col_;
std::vector<DeviceSplitCandidate> best_splits(nidx_set.size());
std::vector<DeviceSplitCandidate> candidate_splits(nidx_set.size() *
columns);
// Use first device
auto& shard = shards.front();
auto& shard = shards_.front();
dh::safe_cuda(cudaSetDevice(shard->device_idx));
shard->temp_memory.LazyAllocate(sizeof(DeviceSplitCandidate) * columns *
nidx_set.size());
@@ -708,16 +707,16 @@ class GPUHistMaker : public TreeUpdater {
// Use streams to process nodes concurrently
for (auto i = 0; i < nidx_set.size(); i++) {
auto nidx = nidx_set[i];
DeviceNodeStats node(shard->node_sum_gradients[nidx], nidx, param);
DeviceNodeStats node(shard->node_sum_gradients[nidx], nidx, param_);
const int BLOCK_THREADS = 256;
evaluate_split_kernel<BLOCK_THREADS>
<<<uint32_t(columns), BLOCK_THREADS, 0, streams[i]>>>(
shard->hist.GetHistPtr(nidx), nidx, info->num_col, node,
shard->feature_segments.data(), shard->min_fvalue.data(),
shard->gidx_fvalue_map.data(), GPUTrainingParam(param),
shard->hist.GetHistPtr(nidx), nidx, info_->num_col_, node,
shard->feature_segments.Data(), shard->min_fvalue.Data(),
shard->gidx_fvalue_map.Data(), GPUTrainingParam(param_),
d_split + i * columns, node_value_constraints_[nidx],
shard->monotone_constraints.data());
shard->monotone_constraints.Data());
}
dh::safe_cuda(
@@ -730,9 +729,9 @@ class GPUHistMaker : public TreeUpdater {
DeviceSplitCandidate nidx_best;
for (auto fidx = 0; fidx < columns; fidx++) {
auto& candidate = candidate_splits[i * columns + fidx];
if (column_sampler.ColumnUsed(candidate.findex,
if (column_sampler_.ColumnUsed(candidate.findex,
p_tree->GetDepth(nidx))) {
nidx_best.Update(candidate_splits[i * columns + fidx], param);
nidx_best.Update(candidate_splits[i * columns + fidx], param_);
}
}
best_splits[i] = nidx_best;
@@ -743,34 +742,34 @@ class GPUHistMaker : public TreeUpdater {
void InitRoot(RegTree* p_tree) {
auto root_nidx = 0;
// Sum gradients
std::vector<bst_gpair> tmp_sums(shards.size());
omp_set_num_threads(shards.size());
std::vector<GradientPair> tmp_sums(shards_.size());
omp_set_num_threads(shards_.size());
#pragma omp parallel
{
auto cpu_thread_id = omp_get_thread_num();
auto& shard = shards[cpu_thread_id];
auto& shard = shards_[cpu_thread_id];
dh::safe_cuda(cudaSetDevice(shard->device_idx));
tmp_sums[cpu_thread_id] = dh::sumReduction(
shard->temp_memory, shard->gpair.data(), shard->gpair.size());
tmp_sums[cpu_thread_id] = dh::SumReduction(
shard->temp_memory, shard->gpair.Data(), shard->gpair.Size());
}
auto sum_gradient =
std::accumulate(tmp_sums.begin(), tmp_sums.end(), bst_gpair_precise());
std::accumulate(tmp_sums.begin(), tmp_sums.end(), GradientPair());
// Generate root histogram
for (auto& shard : shards) {
for (auto& shard : shards_) {
shard->BuildHist(root_nidx);
}
this->AllReduceHist(root_nidx);
// Remember root stats
p_tree->stat(root_nidx).sum_hess = sum_gradient.GetHess();
auto weight = CalcWeight(param, sum_gradient);
p_tree->stat(root_nidx).base_weight = weight;
(*p_tree)[root_nidx].set_leaf(param.learning_rate * weight);
p_tree->Stat(root_nidx).sum_hess = sum_gradient.GetHess();
auto weight = CalcWeight(param_, sum_gradient);
p_tree->Stat(root_nidx).base_weight = weight;
(*p_tree)[root_nidx].SetLeaf(param_.learning_rate * weight);
// Store sum gradients
for (auto& shard : shards) {
for (auto& shard : shards_) {
shard->node_sum_gradients[root_nidx] = sum_gradient;
}
@@ -785,14 +784,14 @@ class GPUHistMaker : public TreeUpdater {
void UpdatePosition(const ExpandEntry& candidate, RegTree* p_tree) {
auto nidx = candidate.nid;
auto left_nidx = (*p_tree)[nidx].cleft();
auto right_nidx = (*p_tree)[nidx].cright();
auto left_nidx = (*p_tree)[nidx].LeftChild();
auto right_nidx = (*p_tree)[nidx].RightChild();
// convert floating-point split_pt into corresponding bin_id
// split_cond = -1 indicates that split_pt is less than all known cut points
auto split_gidx = -1;
auto fidx = candidate.split.findex;
auto default_dir_left = candidate.split.dir == LeftDir;
auto default_dir_left = candidate.split.dir == kLeftDir;
auto fidx_begin = hmat_.row_ptr[fidx];
auto fidx_end = hmat_.row_ptr[fidx + 1];
for (auto i = fidx_begin; i < fidx_end; ++i) {
@@ -801,13 +800,13 @@ class GPUHistMaker : public TreeUpdater {
}
}
auto is_dense = info->num_nonzero == info->num_row * info->num_col;
auto is_dense = info_->num_nonzero_ == info_->num_row_ * info_->num_col_;
omp_set_num_threads(shards.size());
omp_set_num_threads(shards_.size());
#pragma omp parallel
{
auto cpu_thread_id = omp_get_thread_num();
shards[cpu_thread_id]->UpdatePosition(nidx, left_nidx, right_nidx, fidx,
shards_[cpu_thread_id]->UpdatePosition(nidx, left_nidx, right_nidx, fidx,
split_gidx, default_dir_left,
is_dense, fidx_begin, fidx_end);
}
@@ -818,55 +817,55 @@ class GPUHistMaker : public TreeUpdater {
RegTree& tree = *p_tree;
tree.AddChilds(candidate.nid);
auto& parent = tree[candidate.nid];
parent.set_split(candidate.split.findex, candidate.split.fvalue,
candidate.split.dir == LeftDir);
tree.stat(candidate.nid).loss_chg = candidate.split.loss_chg;
parent.SetSplit(candidate.split.findex, candidate.split.fvalue,
candidate.split.dir == kLeftDir);
tree.Stat(candidate.nid).loss_chg = candidate.split.loss_chg;
// Set up child constraints
node_value_constraints_.resize(tree.GetNodes().size());
GradStats left_stats(param);
GradStats left_stats(param_);
left_stats.Add(candidate.split.left_sum);
GradStats right_stats(param);
GradStats right_stats(param_);
right_stats.Add(candidate.split.right_sum);
node_value_constraints_[candidate.nid].SetChild(
param, parent.split_index(), left_stats, right_stats,
&node_value_constraints_[parent.cleft()],
&node_value_constraints_[parent.cright()]);
param_, parent.SplitIndex(), left_stats, right_stats,
&node_value_constraints_[parent.LeftChild()],
&node_value_constraints_[parent.RightChild()]);
// Configure left child
auto left_weight =
node_value_constraints_[parent.cleft()].CalcWeight(param, left_stats);
tree[parent.cleft()].set_leaf(left_weight * param.learning_rate, 0);
tree.stat(parent.cleft()).base_weight = left_weight;
tree.stat(parent.cleft()).sum_hess = candidate.split.left_sum.GetHess();
node_value_constraints_[parent.LeftChild()].CalcWeight(param_, left_stats);
tree[parent.LeftChild()].SetLeaf(left_weight * param_.learning_rate, 0);
tree.Stat(parent.LeftChild()).base_weight = left_weight;
tree.Stat(parent.LeftChild()).sum_hess = candidate.split.left_sum.GetHess();
// Configure right child
auto right_weight =
node_value_constraints_[parent.cright()].CalcWeight(param, right_stats);
tree[parent.cright()].set_leaf(right_weight * param.learning_rate, 0);
tree.stat(parent.cright()).base_weight = right_weight;
tree.stat(parent.cright()).sum_hess = candidate.split.right_sum.GetHess();
node_value_constraints_[parent.RightChild()].CalcWeight(param_, right_stats);
tree[parent.RightChild()].SetLeaf(right_weight * param_.learning_rate, 0);
tree.Stat(parent.RightChild()).base_weight = right_weight;
tree.Stat(parent.RightChild()).sum_hess = candidate.split.right_sum.GetHess();
// Store sum gradients
for (auto& shard : shards) {
shard->node_sum_gradients[parent.cleft()] = candidate.split.left_sum;
shard->node_sum_gradients[parent.cright()] = candidate.split.right_sum;
for (auto& shard : shards_) {
shard->node_sum_gradients[parent.LeftChild()] = candidate.split.left_sum;
shard->node_sum_gradients[parent.RightChild()] = candidate.split.right_sum;
}
this->UpdatePosition(candidate, p_tree);
}
void UpdateTree(HostDeviceVector<bst_gpair>* gpair, DMatrix* p_fmat,
void UpdateTree(HostDeviceVector<GradientPair>* gpair, DMatrix* p_fmat,
RegTree* p_tree) {
// Temporarily store number of threads so we can change it back later
int nthread = omp_get_max_threads();
auto& tree = *p_tree;
monitor.Start("InitData", dList);
monitor_.Start("InitData", device_list_);
this->InitData(gpair, p_fmat, *p_tree);
monitor.Stop("InitData", dList);
monitor.Start("InitRoot", dList);
monitor_.Stop("InitData", device_list_);
monitor_.Start("InitRoot", device_list_);
this->InitRoot(p_tree);
monitor.Stop("InitRoot", dList);
monitor_.Stop("InitRoot", device_list_);
auto timestamp = qexpand_->size();
auto num_leaves = 1;
@@ -874,25 +873,25 @@ class GPUHistMaker : public TreeUpdater {
while (!qexpand_->empty()) {
auto candidate = qexpand_->top();
qexpand_->pop();
if (!candidate.IsValid(param, num_leaves)) continue;
if (!candidate.IsValid(param_, num_leaves)) continue;
// std::cout << candidate;
monitor.Start("ApplySplit", dList);
monitor_.Start("ApplySplit", device_list_);
this->ApplySplit(candidate, p_tree);
monitor.Stop("ApplySplit", dList);
monitor_.Stop("ApplySplit", device_list_);
num_leaves++;
auto left_child_nidx = tree[candidate.nid].cleft();
auto right_child_nidx = tree[candidate.nid].cright();
auto left_child_nidx = tree[candidate.nid].LeftChild();
auto right_child_nidx = tree[candidate.nid].RightChild();
// Only create child entries if needed
if (ExpandEntry::ChildIsValid(param, tree.GetDepth(left_child_nidx),
if (ExpandEntry::ChildIsValid(param_, tree.GetDepth(left_child_nidx),
num_leaves)) {
monitor.Start("BuildHist", dList);
monitor_.Start("BuildHist", device_list_);
this->BuildHistLeftRight(candidate.nid, left_child_nidx,
right_child_nidx);
monitor.Stop("BuildHist", dList);
monitor_.Stop("BuildHist", device_list_);
monitor.Start("EvaluateSplits", dList);
monitor_.Start("EvaluateSplits", device_list_);
auto splits =
this->EvaluateSplits({left_child_nidx, right_child_nidx}, p_tree);
qexpand_->push(ExpandEntry(left_child_nidx,
@@ -901,7 +900,7 @@ class GPUHistMaker : public TreeUpdater {
qexpand_->push(ExpandEntry(right_child_nidx,
tree.GetDepth(right_child_nidx), splits[1],
timestamp++));
monitor.Stop("EvaluateSplits", dList);
monitor_.Stop("EvaluateSplits", device_list_);
}
}
// Reset omp num threads
@@ -910,17 +909,17 @@ class GPUHistMaker : public TreeUpdater {
bool UpdatePredictionCache(
const DMatrix* data, HostDeviceVector<bst_float>* p_out_preds) override {
monitor.Start("UpdatePredictionCache", dList);
if (shards.empty() || p_last_fmat_ == nullptr || p_last_fmat_ != data)
monitor_.Start("UpdatePredictionCache", device_list_);
if (shards_.empty() || p_last_fmat_ == nullptr || p_last_fmat_ != data)
return false;
bst_float* out_preds_d = p_out_preds->ptr_d(param.gpu_id);
bst_float* out_preds_d = p_out_preds->DevicePointer(param_.gpu_id);
#pragma omp parallel for schedule(static, 1)
for (int shard = 0; shard < shards.size(); ++shard) {
shards[shard]->UpdatePredictionCache(out_preds_d);
for (int shard = 0; shard < shards_.size(); ++shard) {
shards_[shard]->UpdatePredictionCache(out_preds_d);
}
monitor.Stop("UpdatePredictionCache", dList);
monitor_.Stop("UpdatePredictionCache", device_list_);
return true;
}
@@ -933,7 +932,7 @@ class GPUHistMaker : public TreeUpdater {
uint64_t timestamp)
: nid(nid), depth(depth), split(split), timestamp(timestamp) {}
bool IsValid(const TrainParam& param, int num_leaves) const {
if (split.loss_chg <= rt_eps) return false;
if (split.loss_chg <= kRtEps) return false;
if (split.left_sum.GetHess() == 0 || split.right_sum.GetHess() == 0)
return false;
if (param.max_depth > 0 && depth == param.max_depth) return false;
@@ -959,38 +958,38 @@ class GPUHistMaker : public TreeUpdater {
}
};
inline static bool depth_wise(ExpandEntry lhs, ExpandEntry rhs) {
inline static bool DepthWise(ExpandEntry lhs, ExpandEntry rhs) {
if (lhs.depth == rhs.depth) {
return lhs.timestamp > rhs.timestamp; // favor small timestamp
} else {
return lhs.depth > rhs.depth; // favor small depth
}
}
inline static bool loss_guide(ExpandEntry lhs, ExpandEntry rhs) {
inline static bool LossGuide(ExpandEntry lhs, ExpandEntry rhs) {
if (lhs.split.loss_chg == rhs.split.loss_chg) {
return lhs.timestamp > rhs.timestamp; // favor small timestamp
} else {
return lhs.split.loss_chg < rhs.split.loss_chg; // favor large loss_chg
}
}
TrainParam param;
TrainParam param_;
common::HistCutMatrix hmat_;
common::GHistIndexMatrix gmat_;
MetaInfo* info;
bool initialised;
int n_devices;
int n_bins;
MetaInfo* info_;
bool initialised_;
int n_devices_;
int n_bins_;
std::vector<std::unique_ptr<DeviceShard>> shards;
ColumnSampler column_sampler;
std::vector<std::unique_ptr<DeviceShard>> shards_;
ColumnSampler column_sampler_;
typedef std::priority_queue<ExpandEntry, std::vector<ExpandEntry>,
std::function<bool(ExpandEntry, ExpandEntry)>>
ExpandQueue;
std::unique_ptr<ExpandQueue> qexpand_;
common::Monitor monitor;
dh::AllReducer reducer;
common::Monitor monitor_;
dh::AllReducer reducer_;
std::vector<ValueConstraint> node_value_constraints_;
std::vector<int> dList;
std::vector<int> device_list_;
DMatrix* p_last_fmat_;
};