More categorical tests and disable shap sparse test. (#6219)

* Fix tree load with 32 category.
This commit is contained in:
Jiaming Yuan
2020-10-10 16:12:37 +08:00
committed by GitHub
parent c991eb612d
commit b5b24354b8
5 changed files with 120 additions and 27 deletions

View File

@@ -212,6 +212,10 @@ class TestGPUPredict(unittest.TestCase):
tm.dataset_strategy, shap_parameter_strategy)
@settings(deadline=None, max_examples=20)
def test_shap_interactions(self, num_rounds, dataset, param):
if dataset.name == 'sparse':
issue = 'https://github.com/dmlc/xgboost/issues/6074'
pytest.xfail(reason=f'GPU shap with sparse is flaky: {issue}')
param.update({"predictor": "gpu_predictor", "gpu_id": 0})
param = dataset.set_params(param)
dmat = dataset.get_dmat()
@@ -220,5 +224,6 @@ class TestGPUPredict(unittest.TestCase):
shap = bst.predict(test_dmat, pred_interactions=True)
margin = bst.predict(test_dmat, output_margin=True)
assume(len(dataset.y) > 0)
assert np.allclose(np.sum(shap, axis=(len(shap.shape) - 1, len(shap.shape) - 2)), margin,
assert np.allclose(np.sum(shap, axis=(len(shap.shape) - 1, len(shap.shape) - 2)),
margin,
1e-3, 1e-3)