check in softmax multiclass
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@ -42,8 +42,9 @@ print ('predicting, classification error=%f' % (sum( int(pred[i]) != test_Y[i] f
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# do the same thing again, but output probabilities
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# do the same thing again, but output probabilities
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param['objective'] = 'multi:softprob'
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param['objective'] = 'multi:softprob'
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bst = xgb.train(param, xg_train, num_round, watchlist );
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bst = xgb.train(param, xg_train, num_round, watchlist );
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# get prediction, this is in 1D array, need reshape to (nclass, ndata)
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# Note: this convention has been changed since xgboost-unity
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yprob = bst.predict( xg_test ).reshape( 6, test_Y.shape[0] )
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# get prediction, this is in 1D array, need reshape to (ndata, nclass)
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ylabel = np.argmax( yprob, axis=0)
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yprob = bst.predict( xg_test ).reshape( test_Y.shape[0], 6 )
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ylabel = np.argmax(yprob, axis=1)
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print ('predicting, classification error=%f' % (sum( int(ylabel[i]) != test_Y[i] for i in range(len(test_Y))) / float(len(test_Y)) ))
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print ('predicting, classification error=%f' % (sum( int(ylabel[i]) != test_Y[i] for i in range(len(test_Y))) / float(len(test_Y)) ))
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@ -225,7 +225,8 @@ extern "C"{
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bst->CheckInit(dtr);
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bst->CheckInit(dtr);
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bst->BoostOneIter(*dtr, grad, hess, len);
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bst->BoostOneIter(*dtr, grad, hess, len);
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}
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}
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const char* XGBoosterEvalOneIter(void *handle, int iter, void *dmats[], const char *evnames[], size_t len) {
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const char* XGBoosterEvalOneIter(void *handle, int iter, void *dmats[],
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const char *evnames[], size_t len) {
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Booster *bst = static_cast<Booster*>(handle);
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Booster *bst = static_cast<Booster*>(handle);
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std::vector<std::string> names;
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std::vector<std::string> names;
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std::vector<const DataMatrix*> mats;
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std::vector<const DataMatrix*> mats;
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@ -247,8 +248,7 @@ extern "C"{
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static_cast<const Booster*>(handle)->SaveModel(fname);
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static_cast<const Booster*>(handle)->SaveModel(fname);
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}
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}
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const char** XGBoosterDumpModel(void *handle, const char *fmap, size_t *len){
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const char** XGBoosterDumpModel(void *handle, const char *fmap, size_t *len){
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using namespace xgboost::utils;
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utils::FeatMap featmap;
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FeatMap featmap;
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if (strlen(fmap) != 0) {
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if (strlen(fmap) != 0) {
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featmap.LoadText(fmap);
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featmap.LoadText(fmap);
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}
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}
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@ -79,6 +79,7 @@ class BoostLearner {
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if (!strcmp(name, "silent")) silent = atoi(val);
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if (!strcmp(name, "silent")) silent = atoi(val);
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if (!strcmp(name, "eval_metric")) evaluator_.AddEval(val);
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if (!strcmp(name, "eval_metric")) evaluator_.AddEval(val);
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if (!strcmp("seed", name)) random::Seed(atoi(val));
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if (!strcmp("seed", name)) random::Seed(atoi(val));
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if (!strcmp(name, "num_class")) this->SetParam("num_output_group", val);
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if (gbm_ == NULL) {
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if (gbm_ == NULL) {
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if (!strcmp(name, "objective")) name_obj_ = val;
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if (!strcmp(name, "objective")) name_obj_ = val;
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if (!strcmp(name, "booster")) name_gbm_ = val;
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if (!strcmp(name, "booster")) name_gbm_ = val;
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@ -7,7 +7,9 @@
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*/
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*/
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#include <vector>
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#include <vector>
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#include <cmath>
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#include <cmath>
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#include "../data.h"
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#include "./objective.h"
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#include "./objective.h"
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#include "./helper_utils.h"
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namespace xgboost {
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namespace xgboost {
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namespace learner {
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namespace learner {
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@ -133,6 +135,94 @@ class RegLossObj : public IObjFunction{
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float scale_pos_weight;
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float scale_pos_weight;
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LossType loss;
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LossType loss;
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};
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};
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// softmax multi-class classification
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class SoftmaxMultiClassObj : public IObjFunction {
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public:
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explicit SoftmaxMultiClassObj(int output_prob)
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: output_prob(output_prob) {
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nclass = 0;
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}
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virtual ~SoftmaxMultiClassObj(void) {}
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virtual void SetParam(const char *name, const char *val) {
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if (!strcmp( "num_class", name )) nclass = atoi(val);
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}
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virtual void GetGradient(const std::vector<float>& preds,
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const MetaInfo &info,
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int iter,
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std::vector<bst_gpair> *out_gpair) {
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utils::Check(nclass != 0, "must set num_class to use softmax");
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utils::Check(preds.size() == static_cast<size_t>(nclass) * info.labels.size(),
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"SoftmaxMultiClassObj: label size and pred size does not match");
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std::vector<bst_gpair> &gpair = *out_gpair;
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gpair.resize(preds.size());
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const unsigned ndata = static_cast<unsigned>(info.labels.size());
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#pragma omp parallel
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{
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std::vector<float> rec(nclass);
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#pragma omp for schedule(static)
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for (unsigned j = 0; j < ndata; ++j) {
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for (int k = 0; k < nclass; ++k) {
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rec[k] = preds[j * nclass + k];
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}
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Softmax(&rec);
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unsigned label = static_cast<unsigned>(info.labels[j]);
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utils::Check(label < nclass, "SoftmaxMultiClassObj: label exceed num_class");
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const float wt = info.GetWeight(j);
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for (int k = 0; k < nclass; ++k) {
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float p = rec[k];
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const float h = 2.0f * p * (1.0f - p) * wt;
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if (label == k) {
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gpair[j * nclass + k] = bst_gpair((p - 1.0f) * wt, h);
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} else {
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gpair[j * nclass + k] = bst_gpair(p* wt, h);
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}
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}
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}
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}
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}
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virtual void PredTransform(std::vector<float> *io_preds) {
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this->Transform(io_preds, output_prob);
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}
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virtual void EvalTransform(std::vector<float> *io_preds) {
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this->Transform(io_preds, 0);
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}
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virtual const char* DefaultEvalMetric(void) {
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return "merror";
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}
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private:
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inline void Transform(std::vector<float> *io_preds, int prob) {
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utils::Check(nclass != 0, "must set num_class to use softmax");
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std::vector<float> &preds = *io_preds;
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const unsigned ndata = static_cast<unsigned>(preds.size()/nclass);
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#pragma omp parallel
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{
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std::vector<float> rec(nclass);
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#pragma omp for schedule(static)
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for (unsigned j = 0; j < ndata; ++j) {
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for (int k = 0; k < nclass; ++k) {
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rec[k] = preds[j * nclass + k];
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}
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if (prob == 0) {
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preds[j] = FindMaxIndex(rec);
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} else {
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Softmax(&rec);
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for (int k = 0; k < nclass; ++k) {
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preds[j * nclass + k] = rec[k];
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}
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}
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}
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}
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if (prob == 0) {
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preds.resize(ndata);
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}
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}
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// data field
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int nclass;
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int output_prob;
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};
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} // namespace learner
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} // namespace learner
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} // namespace xgboost
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} // namespace xgboost
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#endif // XGBOOST_LEARNER_OBJECTIVE_INL_HPP_
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#endif // XGBOOST_LEARNER_OBJECTIVE_INL_HPP_
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@ -71,6 +71,8 @@ inline IObjFunction* CreateObjFunction(const char *name) {
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if (!strcmp("reg:logistic", name)) return new RegLossObj(LossType::kLogisticNeglik);
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if (!strcmp("reg:logistic", name)) return new RegLossObj(LossType::kLogisticNeglik);
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if (!strcmp("binary:logistic", name)) return new RegLossObj(LossType::kLogisticClassify);
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if (!strcmp("binary:logistic", name)) return new RegLossObj(LossType::kLogisticClassify);
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if (!strcmp("binary:logitraw", name)) return new RegLossObj(LossType::kLogisticRaw);
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if (!strcmp("binary:logitraw", name)) return new RegLossObj(LossType::kLogisticRaw);
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if (!strcmp("multi:softmax", name)) return new SoftmaxMultiClassObj(0);
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if (!strcmp("multi:softprob", name)) return new SoftmaxMultiClassObj(1);
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utils::Error("unknown objective function type: %s", name);
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utils::Error("unknown objective function type: %s", name);
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return NULL;
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return NULL;
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}
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}
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