diff --git a/jvm-packages/checkstyle-suppressions.xml b/jvm-packages/checkstyle-suppressions.xml
index 4a0f9ab33..366f6a01e 100644
--- a/jvm-packages/checkstyle-suppressions.xml
+++ b/jvm-packages/checkstyle-suppressions.xml
@@ -28,6 +28,5 @@
 -->
 
 <suppressions>
-<suppress checks=".*"
-files="xgboost4j/src/main/java/ml/dmlc/xgboost4j/java/XGBoostJNI.java"/>
+  <suppress checks=".*" files="XGBoostJNI.java"/>
 </suppressions>