Optimized EvaluateSplut function (#5138)

* Add block based threading utilities.
This commit is contained in:
Egor Smirnov
2019-12-31 13:18:42 +03:00
committed by Jiaming Yuan
parent 04db125699
commit 7b17e76c5b
5 changed files with 317 additions and 47 deletions

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src/common/threading_utils.h Executable file
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/*!
* Copyright 2015-2019 by Contributors
* \file common.h
* \brief Threading utilities
*/
#ifndef XGBOOST_COMMON_THREADING_UTILS_H_
#define XGBOOST_COMMON_THREADING_UTILS_H_
#include <vector>
#include <algorithm>
namespace xgboost {
namespace common {
// Represent simple range of indexes [begin, end)
// Inspired by tbb::blocked_range
class Range1d {
public:
Range1d(size_t begin, size_t end): begin_(begin), end_(end) {
CHECK_LT(begin, end);
}
size_t begin() {
return begin_;
}
size_t end() {
return end_;
}
private:
size_t begin_;
size_t end_;
};
// Split 2d space to balanced blocks
// Implementation of the class is inspired by tbb::blocked_range2d
// However, TBB provides only (n x m) 2d range (matrix) separated by blocks. Example:
// [ 1,2,3 ]
// [ 4,5,6 ]
// [ 7,8,9 ]
// But the class is able to work with different sizes in each 'row'. Example:
// [ 1,2 ]
// [ 3,4,5,6 ]
// [ 7,8,9]
// If grain_size is 2: It produces following blocks:
// [1,2], [3,4], [5,6], [7,8], [9]
// The class helps to process data in several tree nodes (non-balanced usually) in parallel
// Using nested parallelism (by nodes and by data in each node)
// it helps to improve CPU resources utilization
class BlockedSpace2d {
public:
// Example of space:
// [ 1,2 ]
// [ 3,4,5,6 ]
// [ 7,8,9]
// BlockedSpace2d will create following blocks (tasks) if grain_size=2:
// 1-block: first_dimension = 0, range of indexes in a 'row' = [0,2) (includes [1,2] values)
// 2-block: first_dimension = 1, range of indexes in a 'row' = [0,2) (includes [3,4] values)
// 3-block: first_dimension = 1, range of indexes in a 'row' = [2,4) (includes [5,6] values)
// 4-block: first_dimension = 2, range of indexes in a 'row' = [0,2) (includes [7,8] values)
// 5-block: first_dimension = 2, range of indexes in a 'row' = [2,3) (includes [9] values)
// Arguments:
// dim1 - size of the first dimension in the space
// getter_size_dim2 - functor to get the second dimensions for each 'row' by row-index
// grain_size - max size of produced blocks
template<typename Func>
BlockedSpace2d(size_t dim1, Func getter_size_dim2, size_t grain_size) {
for (size_t i = 0; i < dim1; ++i) {
const size_t size = getter_size_dim2(i);
const size_t n_blocks = size/grain_size + !!(size % grain_size);
for (size_t iblock = 0; iblock < n_blocks; ++iblock) {
const size_t begin = iblock * grain_size;
const size_t end = std::min(begin + grain_size, size);
AddBlock(i, begin, end);
}
}
}
// Amount of blocks(tasks) in a space
size_t Size() const {
return ranges_.size();
}
// get index of the first dimension of i-th block(task)
size_t GetFirstDimension(size_t i) const {
CHECK_LT(i, first_dimension_.size());
return first_dimension_[i];
}
// get a range of indexes for the second dimension of i-th block(task)
Range1d GetRange(size_t i) const {
CHECK_LT(i, ranges_.size());
return ranges_[i];
}
private:
void AddBlock(size_t first_dimension, size_t begin, size_t end) {
first_dimension_.push_back(first_dimension);
ranges_.emplace_back(begin, end);
}
std::vector<Range1d> ranges_;
std::vector<size_t> first_dimension_;
};
// Wrapper to implement nested parallelism with simple omp parallel for
template<typename Func>
void ParallelFor2d(const BlockedSpace2d& space, Func func) {
const int num_blocks_in_space = static_cast<int>(space.Size());
#pragma omp parallel for
for (auto i = 0; i < num_blocks_in_space; i++) {
func(space.GetFirstDimension(i), space.GetRange(i));
}
}
} // namespace common
} // namespace xgboost
#endif // XGBOOST_COMMON_THREADING_UTILS_H_