[CI] Improve R linter script (#5944)
* [CI] Move lint to a separate script * [CI] Improved lintr launcher * Add lintr as a separate action * Add custom parsing logic to print out logs * Fix lintr issues in demos * Run R demos * Fix CRAN checks * Install XGBoost into R env before running lintr * Install devtools (needed to run demos)
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.github/workflows/main.yml
vendored
51
.github/workflows/main.yml
vendored
@@ -6,6 +6,9 @@ name: XGBoost-CI
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# events but only for the master branch
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on: [push, pull_request]
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env:
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R_PACKAGES: c('XML', 'igraph', 'data.table', 'magrittr', 'stringi', 'ggplot2', 'DiagrammeR', 'Ckmeans.1d.dp', 'vcd', 'testthat', 'lintr', 'knitr', 'rmarkdown', 'e1071', 'cplm', 'devtools')
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# A workflow run is made up of one or more jobs that can run sequentially or in parallel
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jobs:
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test-with-jvm:
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@@ -38,6 +41,49 @@ jobs:
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mvn test -pl :xgboost4j_2.12
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lintr:
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runs-on: ${{ matrix.config.os }}
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name: Run R linters on OS ${{ matrix.config.os }}, R ${{ matrix.config.r }}, Compiler ${{ matrix.config.compiler }}, Build ${{ matrix.config.build }}
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strategy:
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matrix:
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config:
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- {os: windows-latest, r: 'release', compiler: 'mingw', build: 'autotools'}
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env:
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R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
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RSPM: ${{ matrix.config.rspm }}
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steps:
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- uses: actions/checkout@v2
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with:
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submodules: 'true'
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- uses: r-lib/actions/setup-r@master
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with:
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r-version: ${{ matrix.config.r }}
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- name: Cache R packages
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uses: actions/cache@v2
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with:
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path: ${{ env.R_LIBS_USER }}
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key: ${{ runner.os }}-r-${{ matrix.config.r }}-1-${{ hashFiles('R-package/DESCRIPTION') }}
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restore-keys: ${{ runner.os }}-r-${{ matrix.config.r }}-2-
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- name: Install dependencies
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shell: Rscript {0}
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run: |
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install.packages(${{ env.R_PACKAGES }},
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repos = 'http://cloud.r-project.org',
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dependencies = c('Depends', 'Imports', 'LinkingTo'))
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- name: Run lintr
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run: |
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cd R-package
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R.exe CMD INSTALL .
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Rscript.exe tests/run_lint.R
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test-with-R:
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runs-on: ${{ matrix.config.os }}
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@@ -78,8 +124,9 @@ jobs:
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- name: Install dependencies
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shell: Rscript {0}
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run: |
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install.packages(c('XML','igraph'))
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install.packages(c('data.table','magrittr','stringi','ggplot2','DiagrammeR','Ckmeans.1d.dp','vcd','testthat','lintr','knitr','rmarkdown'))
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install.packages(${{ env.R_PACKAGES }},
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repos = 'http://cloud.r-project.org',
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dependencies = c('Depends', 'Imports', 'LinkingTo'))
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- uses: actions/setup-python@v2
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with:
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