[pyspark] Make Xgboost estimator support using sparse matrix as optimization (#8145)

Signed-off-by: Weichen Xu <weichen.xu@databricks.com>
This commit is contained in:
WeichenXu
2022-08-19 01:57:28 +08:00
committed by GitHub
parent 1703dc330f
commit 53d2a733b0
6 changed files with 318 additions and 27 deletions

View File

@@ -381,6 +381,26 @@ class XgboostLocalTest(SparkTestCase):
],
)
self.reg_df_sparse_train = self.session.createDataFrame(
[
(Vectors.dense(1.0, 0.0, 3.0, 0.0, 0.0), 0),
(Vectors.sparse(5, {1: 1.0, 3: 5.5}), 1),
(Vectors.sparse(5, {4: -3.0}), 2),
]
* 10,
["features", "label"],
)
self.cls_df_sparse_train = self.session.createDataFrame(
[
(Vectors.dense(1.0, 0.0, 3.0, 0.0, 0.0), 0),
(Vectors.sparse(5, {1: 1.0, 3: 5.5}), 1),
(Vectors.sparse(5, {4: -3.0}), 0),
]
* 10,
["features", "label"],
)
def get_local_tmp_dir(self):
return self.tempdir + str(uuid.uuid4())
@@ -972,3 +992,35 @@ class XgboostLocalTest(SparkTestCase):
)
model = classifier.fit(self.cls_df_train)
model.transform(self.cls_df_test).collect()
def test_regressor_with_sparse_optim(self):
regressor = SparkXGBRegressor(missing=0.0)
model = regressor.fit(self.reg_df_sparse_train)
assert model._xgb_sklearn_model.missing == 0.0
pred_result = model.transform(self.reg_df_sparse_train).collect()
# enable sparse optimiaztion
regressor2 = SparkXGBRegressor(missing=0.0, enable_sparse_data_optim=True)
model2 = regressor2.fit(self.reg_df_sparse_train)
assert model2.getOrDefault(model2.enable_sparse_data_optim)
assert model2._xgb_sklearn_model.missing == 0.0
pred_result2 = model2.transform(self.reg_df_sparse_train).collect()
for row1, row2 in zip(pred_result, pred_result2):
self.assertTrue(np.isclose(row1.prediction, row2.prediction, atol=1e-3))
def test_classifier_with_sparse_optim(self):
cls = SparkXGBClassifier(missing=0.0)
model = cls.fit(self.cls_df_sparse_train)
assert model._xgb_sklearn_model.missing == 0.0
pred_result = model.transform(self.cls_df_sparse_train).collect()
# enable sparse optimiaztion
cls2 = SparkXGBClassifier(missing=0.0, enable_sparse_data_optim=True)
model2 = cls2.fit(self.cls_df_sparse_train)
assert model2.getOrDefault(model2.enable_sparse_data_optim)
assert model2._xgb_sklearn_model.missing == 0.0
pred_result2 = model2.transform(self.cls_df_sparse_train).collect()
for row1, row2 in zip(pred_result, pred_result2):
self.assertTrue(np.allclose(row1.probability, row2.probability, rtol=1e-3))