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Updates from 1.2.0 cran submission (#6077)

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* update for 1.2.0 cran submission

* recover cmakelists

* fix unittest from the shap PR

* trigger CI
This commit is contained in:
Tong He
2020-09-02 20:50:23 +08:00
committed by GitHub
parent 9be969cc7a
commit 3912f3de06
23 changed files with 203 additions and 38 deletions
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2
R-package/man/xgb.plot.shap.Rd
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@@ -131,6 +131,7 @@ bst <- xgboost(agaricus.train$data, agaricus.train$label, nrounds = 50,
xgb.plot.shap(agaricus.test$data, model = bst, features = "odor=none")
contr <- predict(bst, agaricus.test$data, predcontrib = TRUE)
xgb.plot.shap(agaricus.test$data, contr, model = bst, top_n = 12, n_col = 3)
xgb.ggplot.shap.summary(agaricus.test$data, contr, model = bst, top_n = 12) # Summary plot
# multiclass example - plots for each class separately:
nclass <- 3
@@ -149,6 +150,7 @@ xgb.plot.shap(x, model = mbst, trees = trees0 + 1, target_class = 1, top_n = 4,
n_col = 2, col = col, pch = 16, pch_NA = 17)
xgb.plot.shap(x, model = mbst, trees = trees0 + 2, target_class = 2, top_n = 4,
n_col = 2, col = col, pch = 16, pch_NA = 17)
xgb.ggplot.shap.summary(x, model = mbst, target_class = 0, top_n = 4) # Summary plot
}
\references{