Avoid including c_api.h in header files. (#5782)

src/c_api/c_api.cc

@@ -38,14 +38,14 @@ XGB_DLL void XGBoostVersion(int* major, int* minor, int* patch) {
   }
 }
 
-int XGBRegisterLogCallback(void (*callback)(const char*)) {
+XGB_DLL int XGBRegisterLogCallback(void (*callback)(const char*)) {
   API_BEGIN();
   LogCallbackRegistry* registry = LogCallbackRegistryStore::Get();
   registry->Register(callback);
   API_END();
 }
 
-int XGDMatrixCreateFromFile(const char *fname,
+XGB_DLL int XGDMatrixCreateFromFile(const char *fname,
                                     int silent,
                                     DMatrixHandle *out) {
   API_BEGIN();
@@ -60,7 +60,7 @@ int XGDMatrixCreateFromFile(const char *fname,
 }
 
 XGB_DLL int XGDMatrixCreateFromDataIter(
-    void *data_handle,                  // a Java interator
+    void *data_handle,                  // a Java iterator
     XGBCallbackDataIterNext *callback,  // C++ callback defined in xgboost4j.cpp
     const char *cache_info, DMatrixHandle *out) {
   API_BEGIN();
@@ -69,7 +69,8 @@ XGB_DLL int XGDMatrixCreateFromDataIter(
   if (cache_info != nullptr) {
     scache = cache_info;
   }
-  xgboost::data::IteratorAdapter adapter(data_handle, callback);
+  xgboost::data::IteratorAdapter<DataIterHandle, XGBCallbackDataIterNext,
+                                 XGBoostBatchCSR> adapter(data_handle, callback);
   *out = new std::shared_ptr<DMatrix> {
     DMatrix::Create(
         &adapter, std::numeric_limits<float>::quiet_NaN(),

src/c_api/c_api_error.cc

@@ -4,6 +4,7 @@
  * \brief C error handling
  */
 #include <dmlc/thread_local.h>
+#include "xgboost/c_api.h"
 #include "./c_api_error.h"
 
 struct XGBAPIErrorEntry {
@@ -12,7 +13,7 @@ struct XGBAPIErrorEntry {
 
 using XGBAPIErrorStore = dmlc::ThreadLocalStore<XGBAPIErrorEntry>;
 
-const char *XGBGetLastError() {
+XGB_DLL const char *XGBGetLastError() {
   return XGBAPIErrorStore::Get()->last_error.c_str();
 }
 

src/c_api/c_api_error.h

@@ -8,7 +8,6 @@
 
 #include <dmlc/base.h>
 #include <dmlc/logging.h>
-#include <xgboost/c_api.h>
 
 /*! \brief  macro to guard beginning and end section of all functions */
 #define API_BEGIN() try {

src/data/adapter.h

@@ -18,8 +18,8 @@
 #include "xgboost/base.h"
 #include "xgboost/data.h"
 #include "xgboost/span.h"
-#include "xgboost/c_api.h"
 
+#include "array_interface.h"
 #include "../c_api/c_api_error.h"
 
 namespace xgboost {
@@ -496,6 +496,7 @@ class FileAdapter : dmlc::DataIter<FileAdapterBatch> {
 
 /*! \brief Data iterator that takes callback to return data, used in JVM package for
  *  accepting data iterator. */
+template <typename DataIterHandle, typename XGBCallbackDataIterNext, typename XGBoostBatchCSR>
 class IteratorAdapter : public dmlc::DataIter<FileAdapterBatch> {
  public:
   IteratorAdapter(DataIterHandle data_handle,

src/data/data.cc

@@ -7,6 +7,7 @@
 
 #include "dmlc/io.h"
 #include "xgboost/data.h"
+#include "xgboost/c_api.h"
 #include "xgboost/host_device_vector.h"
 #include "xgboost/logging.h"
 #include "xgboost/version_config.h"
@@ -533,7 +534,7 @@ DMatrix* DMatrix::Load(const std::string& uri,
 
 template <typename AdapterT>
 DMatrix* DMatrix::Create(AdapterT* adapter, float missing, int nthread,
-                         const std::string& cache_prefix,  size_t page_size ) {
+                         const std::string& cache_prefix,  size_t page_size) {
   if (cache_prefix.length() == 0) {
     // Data split mode is fixed to be row right now.
     return new data::SimpleDMatrix(adapter, missing, nthread);
@@ -563,9 +564,11 @@ template DMatrix* DMatrix::Create<data::DataTableAdapter>(
 template DMatrix* DMatrix::Create<data::FileAdapter>(
     data::FileAdapter* adapter, float missing, int nthread,
     const std::string& cache_prefix, size_t page_size);
-template DMatrix* DMatrix::Create<data::IteratorAdapter>(
+template DMatrix *
-    data::IteratorAdapter* adapter, float missing, int nthread,
+DMatrix::Create(data::IteratorAdapter<DataIterHandle, XGBCallbackDataIterNext,
-    const std::string& cache_prefix, size_t page_size);
+                                      XGBoostBatchCSR> *adapter,
+                float missing, int nthread, const std::string &cache_prefix,
+                size_t page_size);
 
 SparsePage SparsePage::GetTranspose(int num_columns) const {
   SparsePage transpose;

src/data/data.cu

@@ -10,7 +10,7 @@
 #include "array_interface.h"
 #include "../common/device_helpers.cuh"
 #include "device_adapter.cuh"
-#include "device_dmatrix.h"
+#include "simple_dmatrix.h"
 
 namespace xgboost {
 

src/data/simple_dmatrix.cc

@@ -4,8 +4,14 @@
  * \brief the input data structure for gradient boosting
  * \author Tianqi Chen
  */
-#include "./simple_dmatrix.h"
+#include <vector>
-#include <xgboost/data.h>
+#include <limits>
+#include <algorithm>
+
+#include "xgboost/data.h"
+#include "xgboost/c_api.h"
+
+#include "simple_dmatrix.h"
 #include "./simple_batch_iterator.h"
 #include "../common/random.h"
 #include "adapter.h"
@@ -195,7 +201,9 @@ template SimpleDMatrix::SimpleDMatrix(DataTableAdapter* adapter, float missing,
                                      int nthread);
 template SimpleDMatrix::SimpleDMatrix(FileAdapter* adapter, float missing,
                                      int nthread);
-template SimpleDMatrix::SimpleDMatrix(IteratorAdapter* adapter, float missing,
+template SimpleDMatrix::SimpleDMatrix(
-                                     int nthread);
+    IteratorAdapter<DataIterHandle, XGBCallbackDataIterNext, XGBoostBatchCSR>
+        *adapter,
+    float missing, int nthread);
 }  // namespace data
 }  // namespace xgboost

tests/cpp/data/test_adapter.cc

@@ -68,7 +68,7 @@ TEST(Adapter, CSCAdapterColsMoreThanRows) {
 }
 
 // A mock for JVM data iterator.
-class DataIterForTest {
+class CSRIterForTest {
   std::vector<float> data_ {1, 2, 3, 4, 5};
   std::vector<std::remove_pointer<decltype(std::declval<XGBoostBatchCSR>().index)>::type>
       feature_idx_ {0, 1, 0, 1, 1};
@@ -100,16 +100,16 @@ class DataIterForTest {
   size_t Iter() const { return iter_; }
 };
 
-size_t constexpr DataIterForTest::kCols;
+size_t constexpr CSRIterForTest::kCols;
 
-int SetDataNextForTest(DataIterHandle data_handle,
+int CSRSetDataNextForTest(DataIterHandle data_handle,
                           XGBCallbackSetData *set_function,
                           DataHolderHandle set_function_handle) {
   size_t constexpr kIters { 2 };
-  auto iter = static_cast<DataIterForTest *>(data_handle);
+  auto iter = static_cast<CSRIterForTest *>(data_handle);
   if (iter->Iter() < kIters) {
     auto batch = iter->Next();
-    batch.columns = DataIterForTest::kCols;
+    batch.columns = CSRIterForTest::kCols;
     set_function(set_function_handle, batch);
     return 1;
   } else {
@@ -118,15 +118,15 @@ int SetDataNextForTest(DataIterHandle data_handle,
 }
 
 TEST(Adapter, IteratorAdaper) {
-  DataIterForTest iter;
+  CSRIterForTest iter;
-  data::IteratorAdapter adapter{&iter, SetDataNextForTest};
+  data::IteratorAdapter<DataIterHandle, XGBCallbackDataIterNext,
+                        XGBoostBatchCSR> adapter{&iter, CSRSetDataNextForTest};
   constexpr size_t kRows { 6 };
 
   std::unique_ptr<DMatrix> data {
     DMatrix::Create(&adapter, std::numeric_limits<float>::quiet_NaN(), 1)
   };
-  ASSERT_EQ(data->Info().num_col_, DataIterForTest::kCols);
+  ASSERT_EQ(data->Info().num_col_, CSRIterForTest::kCols);
   ASSERT_EQ(data->Info().num_row_, kRows);
 }
-
 }  // namespace xgboost